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  • Giving writing permissions for IIS user at Windows 2003 Server

    - by Steve
    I am running a website over Windows 2003 Server and IIS6 and I am having problems to write or delete files in some temporary folder obtaining this kind of warmings: Warning: unlink(C:\Inetpub\wwwroot\cakephp\app\tmp\cache\persistent\myapp_cake_core_cake_): Permission denied in C:\Inetpub\wwwroot\cakephp\lib\Cake\Cache\Engine\FileEngine.php on line 254 I went to the tmp directory and at the properties I gave the IIS User the following permissions: Read & Execute List folder Contents Read And it still showing the same warnings. When I am on the properties window, if I click on Advanced the IIS username appears twice. One with Allow type and read & execute permissions and the other with Deny type and Special permissions. My question is: Should I give this user not only the Read & Execute permissions but also this ones?: Create Attributes Create Files/ Write Data Create Folders/ Append Data Delete Subfolders and Files Delete They are available to select if I Click on the edit button over the username. Wouldn't I be opening a security hole if I do this? Otherwise, how can I do to read and delete the files my website uses? Thanks.

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  • Style first 2 TextViews in Android ListView differently

    - by Kurtis Nusbaum
    I have a ListView and I want the first two entries in it to be displayed differently than the rest. Nothing fancy, I want them all to just be text views. But the first two entries need to have different sizes and weights than the rest. I tried modifying the ArrayAdapter class like so: private class BusStopAdapter<T> extends ArrayAdapter<T>{ public BusStopAdapter( Context context, int textViewResourceId, List<T> objects) { super(context, textViewResourceId, objects); } public View getView(int position, View convertView, ViewGroup parent) { TextView toReturn = (TextView)super.getView(position, convertView, parent); if(position == 0){ toReturn.setTextSize(12); toReturn.setText("Previous Bus: " + toReturn.getText()); toReturn.setPadding(0,0,0,0); } else if(position == 1){ toReturn.setTextSize(20); toReturn.setPadding( toReturn.getPaddingLeft(), 0, toReturn.getPaddingRight(), 0 ); toReturn.setText("Next Bus: " + toReturn.getText()); toReturn.setGravity(Gravity.CENTER_HORIZONTAL|Gravity.TOP); } return toReturn; } } But this inadvertantly causes some of the other textviews to take on these special attributes. I think it's because cause textviews get "recycled" in the AbsListAdapter class.

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  • Launch a new page in Zend/php on button click

    - by BlueMonster
    PHP & Zend Noob here I've downloaded the skeleton project from here: https://github.com/zendframework/ZendSkeletonApplication Say i want to open a new page that simply displays "hello world" text if click on the "ZF2 Development Portal" button(bottom left green button) on the page that launches --- how do i do this? See image: I've read through this tutorial, but i'm not sure how the model, view, or controller are actually launched? See tutorial: http://blog.wilgucki.pl/2012/07/tworzenie-modulw-w-zend-framework-2.html From looking at the code, i know that i will have to change this line of code: <div class="span4"> <h2><?php echo $this->translate('Follow Development') ?></h2> <p><?php echo sprintf($this->translate('Zend Framework 2 is under active development. If you are interested in following the development of ZF2, there is a special ZF2 portal on the official Zend Framework website which provides links to the ZF2 %swiki%s, %sdev blog%s, %sissue tracker%s, and much more. This is a great resource for staying up to date with the latest developments!'), '<a href="http://framework.zend.com/wiki/display/ZFDEV2/Home">', '</a>', '<a href="http://framework.zend.com/zf2/blog">', '</a>', '<a href="http://framework.zend.com/issues/browse/ZF2">', '</a>') ?></p> <p><a class="btn btn-success" href="http://framework.zend.com/zf2" target="_blank"><?php echo $this->translate('ZF2 Development Portal') ?> &raquo;</a></p> </div> More specifically this line: <p><a class="btn btn-success" href="http://framework.zend.com/zf2" target="_blank"><?php echo $this->translate('ZF2 Development Portal') ?> &raquo;</a></p> but i'm really confused as to what i'm supposed to change it to in order to launch a new page. Any ideas? Thanks in advance!

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  • HTTP POST with URL query parameters -- good idea or not?

    - by Steven Huwig
    I'm designing an API to go over HTTP and I am wondering if using the HTTP POST command, but with URL query parameters only and no request body, is a good way to go. Considerations: "Good Web design" requires non-idempotent actions to be sent via POST. This is a non-idempotent action. It is easier to develop and debug this app when the request parameters are present in the URL. The API is not intended for widespread use. It seems like making a POST request with no body will take a bit more work, e.g. a Content-Length: 0 header must be explicitly added. It also seems to me that a POST with no body is a bit counter to most developer's and HTTP frameworks' expectations. Are there any more pitfalls or advantages to sending parameters on a POST request via the URL query rather than the request body? Edit: The reason this is under consideration is that the operations are not idempotent and have side effects other than retrieval. See the HTTP spec: In particular, the convention has been established that the GET and HEAD methods SHOULD NOT have the significance of taking an action other than retrieval. These methods ought to be considered "safe". This allows user agents to represent other methods, such as POST, PUT and DELETE, in a special way, so that the user is made aware of the fact that a possibly unsafe action is being requested. ... Methods can also have the property of "idempotence" in that (aside from error or expiration issues) the side-effects of N 0 identical requests is the same as for a single request. The methods GET, HEAD, PUT and DELETE share this property. Also, the methods OPTIONS and TRACE SHOULD NOT have side effects, and so are inherently idempotent.

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  • Simplifying for-if messes with better structure?

    - by HH
    # Description: you are given a bitwise pattern and a string # you need to find the number of times the pattern matches in the string # any one liner or simple pythonic solution? import random def matchIt(yourString, yourPattern): """find the number of times yourPattern occurs in yourString""" count = 0 matchTimes = 0 # How can you simplify the for-if structures? for coin in yourString: #return to base if count == len(pattern): matchTimes = matchTimes + 1 count = 0 #special case to return to 2, there could be more this type of conditions #so this type of if-conditionals are screaming for a havoc if count == 2 and pattern[count] == 1: count = count - 1 #the work horse #it could be simpler by breaking the intial string of lenght 'l' #to blocks of pattern-length, the number of them is 'l - len(pattern)-1' if coin == pattern[count]: count=count+1 average = len(yourString)/matchTimes return [average, matchTimes] # Generates the list myString =[] for x in range(10000): myString= myString + [int(random.random()*2)] pattern = [1,0,0] result = matchIt(myString, pattern) print("The sample had "+str(result[1])+" matches and its size was "+str(len(myString))+".\n" + "So it took "+str(result[0])+" steps in average.\n" + "RESULT: "+str([a for a in "FAILURE" if result[0] != 8])) # Sample Output # # The sample had 1656 matches and its size was 10000. # So it took 6 steps in average. # RESULT: ['F', 'A', 'I', 'L', 'U', 'R', 'E']

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  • Extending the method pool of a concrete class which is derived by an interface

    - by CelGene
    Hello, I had created an interface to abstract a part of the source for a later extension. But what if I want to extend the derived classes with some special methods? So I have the interface here: class virtualFoo { public: virtual ~virtualFoo() { } virtual void create() = 0; virtual void initialize() = 0; }; and one derived class with an extra method: class concreteFoo : public virtualFoo { public: concreteFoo() { } ~concreteFoo() { } virtual void create() { } virtual void initialize() { } void ownMethod() { } }; So I try to create an Instance of concreteFoo and try to call ownMethod like this: void main() { virtualFoo* ptr = new concreteFoo(); concreteFoo* ptr2 = dynamic_cast(ptr); if(NULL != ptr2) ptr2->ownMethod(); } It works but is not really the elegant way. If I would try to use ptr-ownMethod(); directly the compiler complains that this method is not part of virtualFoo. Is there a chance to do this without using dynamic_cast? Thanks in advance!

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  • Datepicker BeforeShowDay CSS problem with content styling

    - by Darklomba
    I think I'm not the only one having this problem. Whenever I try to apply a BeforeShowDay a new CSS class, the content of the "special date" is not being modified. I tried changing the default theme, adding a new class, but this is affecting only the outside border and not the inside content. Using Firebug I found that the html code being printed is the following: <td class=" ui-state-content ui-state-anulados" onclick="DP_jQuery.datepicker._selectDay('#datepicker',9,2009, this);return false;" title="Paddle"> <a class="ui-state-default" href="#">16</a> </td> So, my class would be ui-state-content ui-state-anulados but I notice that the ui-state-default class is being applied automatically and I suspect that this may be the problem. I really don't know how to solve this. I've been looking inside ui.datepicker.js code and I think I found the line that is giving me this problems. It is line number 1394 and it has the following code. (ui.datepicker.js) (unselectable ? '<span class="ui-state-default">' + printDate.getDate() + '</span>' : '<a class="ui-state-default' + Any clues on how this can be done? Thanks in advance. Manuel.-

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  • Struts 2 discard cache header

    - by Dewfy
    I have strange discarding behavior of struts2 while setting cache option for my image. I'm trying to put image from db to be cached on client side To render image I use ( http://struts.apache.org/2.x/docs/how-can-we-display-dynamic-or-static-images-that-can-be-provided-as-an-array-of-bytes.html ) where special result type render as follow: public void execute(ActionInvocation invocation) throws Exception { ...//some preparation HttpServletResponse response = ServletActionContext.getResponse(); HttpServletRequest request = ServletActionContext.getRequest(); ServletOutputStream os = response.getOutputStream(); try { byte[] imageBytes = action.getImage(); response.setContentType("image/gif"); response.setContentLength(imageBytes.length); //I want cache up to 10 min Date future = new Date(((new Date()).getTime() + 1000 * 10*60l)); ; response.addDateHeader("Expires", future.getTime()); response.setHeader("Cache-Control", "max-age=" + 10*60 + ""); response.addHeader("cache-Control", "public"); response.setHeader("ETag", request.getRequestURI()); os.write(imageBytes); } catch(Exception e) { response.sendError(HttpServletResponse.SC_NOT_FOUND); } os.flush(); os.close(); } But when image is embedded to page it is always reloaded (Firebug shows code 200), and neither Expires, nor max-age are presented in header Host localhost:9090 Accept image/png,image/*;q=0.8,*/*;q=0.5 Accept-Language en-us,en;q=0.5 Accept-Encoding gzip,deflate Accept-Charset ISO-8859-1,utf-8;q=0.7,*;q=0.7 Keep-Alive 300 Connection keep-alive Referer http://localhost:9090/web/result?matchId=1 Cookie JSESSIONID=4156BEED69CAB0B84D950932AB9EA1AC; If-None-Match /web/_srv/teamcolor Cache-Control max-age=0 I have no idea why it is dissapered, may be problem in url? It is forms with parameter: http://localhost:9090/web/_srv/teamcolor?loginId=3

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  • How to customize the printing while using Window.print ?

    - by Holicreature
    i want to print a invoice and i use a print.css by media=print and when i change the current stylesheet to print.css i could able to view what i should be printing without the titles and content left aligned. But still while i'm printing there is space in the top and left and its taking up whole a4 sheet and also the whole width of the page.. But i've defined a body width of just 550 px. While i view to print preview, it takes the whole width instead of taking up 1/3 of the width.. My print.css is body { width:550px; height:450px; color:#000000; margin:0; padding:0; word-spacing:1.1pt; font-family : "Times New Roman", Times, serif; font-size : 10px; text-align:left; } a { visibility :hidden; display : none; } input{ display : none; } table { margin: 1px; text-align:left; } #list,#head,#cont,#fotter,#oth,#links,#name,li,ul,ol { display : none; } I'm printing through browser using window.print, so is there any special configuration i need to do...?

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  • check properties of two objects for changes

    - by k-hoffmann
    Hi, i have to develop a mechanism to check two object properties for changes. All properties which are needed to check are marked with an attribute. Atm i - read all properties from acutal object via linq - read the corresponding property from old object - fill an own object with the two properties (old and new value) In Code the call to the workerclass looks like this public void CreateHistoryMap(BaseEntity actual, BaseEntity old) { CreateHistoryMap(actualEntity, oldEntity) .ForEach(mapEntry => CreateHistoryEntry(mapEntry), mapEntry => IfChangesDetected(mapEntry)); } CreateHistoryMap builds up the HistoryMapEntry which contains the two properties. CreateHistoryEntry build up the object which is saved to database, the IfChangesDetected check the object for changes. I have to handle own special application types to generate history values to database (like concatinating list values and so on). My problem is now, that i have to read the values of the properties twice - for change detection - and for the concreate CreateHistoryEntry How can i eliminate this problem or how can i implement the change tracking scenario with the nice c# 3.5 features? Thanks a lot.

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  • How to make categories and current page highlighting in PHP?

    - by Markus Ossi
    I am trying to find some example code or best practices about making CMS-type categories with PHP. This is a problem that has for sure been solved gazillion times but for some reason I am unable to find any example code using PHP about how to implement this. As far as I can tell, there are two parts to the problem. The first one has to with the styling side of things: outputting the link in the navigation so that the current page has a special style (class="active") and to not print out the link for the current page. The second part is handling categories, subcategories and the dynamic pages under the categories. The second part seems pretty straightforward. I am thinking of making it so that the name of the category in the navigation is a link to categories.php?id=x and on this page I just print out the pages with that category id. Then, if the user klicks on a page he will be taken to pages.php?id=y. However, I am not quite sure on how to make a navigation to check if we are now on the current page. Should I just use some case switch or what? Any ideas or links to some good example code are much appreciated.

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  • Fontforge finds no fonts

    - by user1858080
    I'm trying to make my c++ program detect installed fonts on my Win32 machine. I tried fontforge by taking the library from the GTK+ bundle. I use the following test code: #include<fontconfig.h> FcBool success = FcInit (); if ( !success ) { return false; } FcConfig *config = FcInitLoadConfigAndFonts (); if(!config) { return false; } FcChar8 *s, *file; FcPattern *p = FcPatternCreate(); FcObjectSet *os = FcObjectSetBuild (FC_FAMILY,NULL); FcFontSet *fs = FcFontList(config, p, os); LOG("Total fonts: %d\n", fs->nfont); for (int i=0; fs && i < fs->nfont; i++) { FcPattern *font = fs->fonts[i]; s = FcNameUnparse(font); LOG("Font: %s\n", s); free(s); if (FcPatternGetString(font, FC_FILE, 0, &file) == FcResultMatch) { LOG("Filename: %s\n", file); } } // destroy objects here ... Unfortunately this test application only prints: "Total fonts: 0" I know there are fonts installed on my machine and I know that Gimp2.0 detects them, so there must be somthing wrong with my test code. Does anyone have any idea? Besides linking the fontconfig-1.dll I did nothing special. I haven't created any config files or anything, because I couldn't read anywhere about having to do that. Please place any suggestions, thanks!

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  • How do you work around memcached's key/value limitations?

    - by mjy
    Memcached has length limitations for keys (250?) and values (roughtly 1MB), as well as some (to my knowledge) not very well defined character restrictions for keys. What is the best way to work around those in your opinion? I use the Perl API Cache::Memcached. What I do currently is store a special string for the main key's value if the original value was too big ("parts:<number") and in that case, I store <number parts with keys named 1+<main key, 2+<main key etc.. This seems "OK" (but messy) for some cases, not so good for others and it has the intrinsic problem that some of the parts might be missing at any time (so space is wasted for keeping the others and time is wasted reading them). As for the key limitations, one could probably implement hashing and store the full key (to work around collisions) in the value, but I haven't needed to do this yet. Has anyone come up with a more elegant way, or even a Perl API that handles arbitrary data sizes (and key values) transparently? Has anyone hacked the memcached server to support arbitrary keys/values?

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  • How can I edit an incoming text message (sms) as it arrives in windows mobile 6 using managed code

    - by x86shadow
    I want to make an application for pocket PCs to send and receive Encrypted text messages. I have already made an application that gets special text messages ( starting with !farenc! ) and I know how to Encrypt/Decrypt the messages as well. The problem is that I don't know how to edit a text message after it's arrived (for decryption). See code below for more info. using System; using System.Linq; using System.Collections.Generic; using System.ComponentModel; using System.Data; using System.Drawing; using System.Text; using System.Windows.Forms; using Microsoft.WindowsMobile; using Microsoft.WindowsMobile.PocketOutlook; using Microsoft.WindowsMobile.PocketOutlook.MessageInterception; namespace SMSDECRYPT { public partial class Form1 : Form { MessageInterceptor _SMSCatcher = new MessageInterceptor(InterceptionAction.Notify, true); MessageCondition _SMSFilter = new MessageCondition(); public Form1() { InitializeComponent(); _SMSFilter.Property = MessageProperty.Body; _SMSFilter.ComparisonType = MessagePropertyComparisonType.StartsWith; _SMSFilter.CaseSensitive = true; _SMSFilter.ComparisonValue = "!farenc!"; _SMSCatcher.MessageCondition = _SMSFilter; _SMSCatcher.MessageReceived += new MessageInterceptorEventHandler(_SMSCatcher_MessageReceived); } private void Form1_Load(object sender, EventArgs e) { //... } void _SMSCatcher_MessageReceived(object sender, MessageInterceptorEventArgs e) { SmsMessage mySMS = (SmsMessage)e.Message; string sms = mySMS.Body.ToString(); sms = sms.Substring(8); //Decryption //... //Update the received message and replace it with the decrypted text //!!!HELP!!! } } }

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  • django: results in in_bulk style without IDs

    - by valya
    in django 1.1.1, Place.objects.in_bulk() does not work and Place.objects.in_bulk(range(1, 100)) works and returns a dictionary of Ints to Places with indexes - primary keys. How to avoid using range in this situation (and avoid using a special query for ids, I just want to get all objects in this dictionary format) >>> Place.objects.in_bulk() Traceback (most recent call last): File "<console>", line 1, in <module> File "/usr/lib/python2.5/site-packages/Django-1.1.1-py2.5.egg/django/db/models/manager.py", line 144, in in_bulk return self.get_query_set().in_bulk(*args, **kwargs) TypeError: in_bulk() takes exactly 2 arguments (1 given) >>> Place.objects.in_bulk(range(1, 100)) {1L: <Place: "??? ????">, 3L: <Place: "???????????? ?????">, 4L: <Place: "????????? "??????"">, 5L: <Place: "????????? "??????"">, 8L: <Place: "????????? "??????????????"">, 9L: <Place: "??????? ????????">, 10L: <Place: "????????? ???????">, 11L: <Place: "??????????????? ???">, 14L: <Place: "????? ????? ??????">}

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  • convert jruby 1.8 string to windows encoding?

    - by Arne
    Hey, I want to export some data from my jruby on rails webapp to excel, so I create a csv string and send it as a download to the client using send_data(text, :filename => "file.csv", :type => "text/csv; charset=CP1252", :encoding => "CP1252") The file seems to be in UTF-8 which Excel cannot read correctly. I googled the problem and found that iconv can convert encodings. I try to do that with: ic = Iconv.new('CP1252', 'UTF-8') text = ic.iconv(text) but when I send the converted text it does not make any difference. It is still UTF-8 and Excel cannot read the special characters. there are several solutions using iconv, so this seems to work for others. When I convert the file on the linux shell manually with iconv it works. What am I doing wrong? Is there a better way? Im using: - jruby 1.3.1 (ruby 1.8.6p287) (2009-06-15 2fd6c3d) (Java HotSpot(TM) Client VM 1.6.0_19) [i386-java] - Debian Lenny - Glassfish app server - Iceweasel 3.0.6

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  • setup Qt and PyQt on mac osx so my app can also deployable on windows

    - by hk_programmer
    Hi, I've been coding with Python and C++ and now need to work on building a gui for data visualization purposes. I work on Mac Snow Leopard (intel), python 3.1 using gcc 4.2.1 (from Xcode 3.1) I wanted to first install Qt and then PyQt. And my goals are to be able to: - quickly prototype GUI and the accompanied logic that drives the GUI using PyQt and python - if I decided I need the speed, or if it's fairly easy to translate my GUI into C++ using the Qt tools, I have the options to translate my app into C++ - Be able to deploy my application onto Windows (both the python and c++ version of my app) Give the goals above, what are the correct steps I should take and what issues i should be aware of when setting up Qt and PyQt. Which other deployment tools do I need? From my readings so far, here's what I have: download the Qt source for mac and configure it with -platform macx-g++42 -arch x86_64 -no-framework (i've read somewhere that building as framework causes some trouble in deployment and/or debugging, can't find the article anymore) download latest SIP source and build download latest PyQt and build from source (any special options I should pay attention to?) For deployment, I've read that I would need to use py2exe/cx_freeze for windows, p2app for mac: http://arstechnica.com/open-source/guides/2009/03/how-to-deploying-pyqt-applications-on-windows-and-mac-os-x.ars but seems like what the article describe is deploying an app you build on windows on the windows platform and vice versa. How do you deploy to windows (is it even possible?) if you are writing your Qt app on a mac ? Really appreciate the help

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  • I want tell the VC++ Compiler to compile all code. Can it be done?

    - by KGB
    I am using VS2005 VC++ for unmanaged C++. I have VSTS and am trying to use the code coverage tool to accomplish two things with regards to unit tests: See how much of my referenced code under test is getting executed See how many methods of my code under test (if any) are not unit tested at all Setting up the VSTS code coverage tool (see the link text) and accomplishing task #1 was straightforward. However #2 has been a surprising challenge for me. Here is my test code. class CodeCoverageTarget { public: std::string ThisMethodRuns() { return "Running"; } std::string ThisMethodDoesNotRun() { return "Not Running"; } }; #include <iostream> #include "CodeCoverageTarget.h" using namespace std; int main() { CodeCoverageTarget cct; cout<<cct.ThisMethodRuns()<<endl; } When both methods are defined within the class as above the compiler automatically eliminates the ThisMethodDoesNotRun() from the obj file. If I move it's definition outside the class then it is included in the obj file and the code coverage tool shows it has not been exercised at all. Under most circumstances I want the compiler to do this elimination for me but for the code coverage tool it defeats a significant portion of the value (e.g. finding untested methods). I have tried a number of things to tell the compiler to stop being smart for me and compile everything but I am stumped. It would be nice if the code coverage tool compensated for this (I suppose by scanning the source and matching it up with the linker output) but I didn't find anything to suggest it has a special mode to be turned on. Am I totally missing something simple here or is this not possible with the VC++ compiler + VSTS code coverage tool? Thanks in advance, KGB

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  • Spring MVC: How to get the remaining path after the controller path?

    - by Willis Blackburn
    I've spent over an hour trying to find the answer to this question, which seems like it should reflect a common use case, but I can't figure it out! Basically I am writing a file-serving controller using Spring MVC. The URLs are of the format http://www.bighost.com/serve/the/path/to/the/file.jpg, in which the part after "/serve" is the path to the requested file, which may have an arbitrary number of path segments. I have a controller like this: @Controller class ServerController { @RequestMapping(value = "/serve/???") public void serve(???) { } } What I am trying to figure out is: What do I use in place of "???" to make this work? I have two theories about how this should work. The first theory is that I could replace the first "???" in the RequestMapping with a path variable placeholder that has some special syntax meaning "capture to the end of the path." If a regular placeholder looks like "{path}" then maybe I could use "{path:**}" or "{path:/}" or something like that. Then I could use a @PathVariable annotation to refer to the path variable in the second "???". The other theory is that I could replace the first "???" with "**" (match anything) and that Spring would give me an API to obtain the remainder of the path (the part matching the "**"). But I can't find such an API. Thanks for any help you can provide!

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  • facebook graph api does not return all feed items on facebook page

    - by Nick Franceschina
    at the time of this question, if you go here: http://www.facebook.com/realplayer you'll see six posts down, I have posted a photo with a message of "#highfive Cincinnati, OH" but if you to either of these: http://graph.facebook.com/realplayer/feed http://graph.facebook.com/realplayer/tagged the JSON that is returned seemingly includes everything on the wall, except for MY post. there is another photo post from someone else down below mine, and it is showing up (and both my photo and his photo are in the "Fan photos" section) obviously, since I can see everything with these links already, it appears that access_token is not a part of the equation... BUT, some more info: if I use an access_token from a session that isn't me, I can't see the post in the JSON if I use an access_token from MY logged in session, then I DO see the post in the JSON so I'm very confused. if everyone in the world can see those posts on the wall without even authenticating, then I expect all of them to come back in the graph api as well. anyone have thoughts on this? I am aware of the "manage_page" permission... which I can use to get a list of accounts and special offline access tokens for those pages... and that's something I can explore... but it seems like alot of work when my post seemingly SHOULD be there in the graph

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  • Parse large XML file w/ script or use BioPython API ?

    - by jeremy04
    Hey guys this is my first question on here. I'm trying to make a local copy of the UniprotKB in SQL. The UniprotKB is 2.1GB, and it comes in XML and a special text format used by SwissProt Here are my options: 1) Use a SAX parser (XML) - I chose Ruby, and Nokogiri. I started writing the parser, but my initial reaction: how would I map the XML schema to the SAX parser? 2) BioPython - I already have BioSQL/Biopython installed, which literally created my SQL schema for me, and I was able to successfully insert one SwissProt/Uniprot txt file into the database. I'm running it right now (crosses fingers) on the entire 2.1gb. Here is the code I'm running: from Bio import SeqIO from BioSQL import BioSeqDatabase from Bio import SwissProt server = BioSeqDatabase.open_database(driver = "MySQLdb", user = "root", passwd = "", host="localhost", db = "bioseqdb") db = server["uniprot"] iterator = SeqIO.parse(open("/path/to/uniprot_sprot.dat", "r"), "swiss") db.load(iterator) server.commit() Edit: it's now crashing because the transactions are getting locked (since the tables are Innodb) Error Number: 1205 Lock wait timeout exceeded; try restarting transaction. I'm using MySQL version: 5.1.43 Should I switch my database to Postgrelsql ?

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  • Google App Engine datastore encoding?

    - by sernaferna
    I'm using the GAE datastore for a Java application, and storing some text that will be in numerous languages. In my servlet, I'm first checking to see if there's any data in the data store, and, if not, I'm creating some, similar to the following: ArrayList<Lang> list = new ArrayList<Lang>(); list.add(new Lang("EN", "English", 1)); list.add(new Lang("ES", "Español", 0)); //more languages here... PersistenceManager pm = PMF.get().getPersistenceManager(); for(Lang l : list) { pm.makePersistent(l); } Since this is using JDO, I guess I should include the relevent parts of the Lang class too: @PersistenceCapable public class Lang { @PrimaryKey private String code; @Persistent private String name; @Persistent private int popularity; // getters & setters & constructors... } However, the non-ASCII characters are giving me grief. I've set my Eclipse project to use the UTF-8 encoding instead of the default Cp1252, so I think I'm okay from that perspective, but when I use the App Engine Data Viewer to look at my data, that Español entry becomes Español, and when I click on it to view it, I get a 500 Server Error. (There are some other entries with right-to-left text that don't even show up in the Data Viewer at all, but one problem at a time...) Is there anything special I can do in my code to set the character encoding, or specify to GAE that the data I'm storing is UTF-8? Or is the problem on the Eclipse side, and is there something I should be doing with my Java code?

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  • Whose fault is a NullReferenceException?

    - by stefan.at.wpf
    I'm currently working on a class which exposes an internal List through a property. The List shall and can be modified. The problem is, entries in the internal list could be set to null from outside the class. My code actually looks like this: class ClassWithList { List<object> _list = new List<object>(); // get accessor, which however returns the reference to the list, // therefore the list can be modified (this is intended) public List<object> Data { get { return _list; } } private void doSomeWorkWithTheList() { foreach(object obj in _list) // do some work with the objects in the list without checking for null. } } So now in the doSomeWorkWithTheList() I could always check whether the current list entry is null or I could just asume that the person using this class doesn't have the great idea to set entries to null. So finally the questions end up in: Whose fault is a NullReferenceException in this case? Is it the fault of the class developer not checking everything for null (which would make code generally - not only in this class - more complex) or is it the fault of the user of this class, as setting a List entry to null doesn't really make sense? I'd tend to generally not check values for null except in some really special cases. Is this a bad style or de facto standard / standard in praxis? I know there's probably no ultimate answer for this, I'm just missing enough experience for such thing and therefore wondering what other developers think about such cases and want to hear what's done in reality about checking null (or not).

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  • What is the most common way to use a middleware in node with express and connect

    - by Bernhard
    Thinking about the correct way, how to make use of middlewares in a node.js web project using express and connect which is growing up at the moment. Of course there are middlewares right now wich has to pass or extend requests globally but in a lot of cases there are special jobs like prepare incoming data and in this case the middleware would only work for a set of http-methods and routes. I've a component based architecture and each component brings it's own middleware layer which can implement those for requests this component can handle. On app startup any required component is loaded and prepared. Is it a good idea to bind the middleware code execution to URLs to keep cpu load lower or is it better to use middlewares only for global purposes? Here's some dummy how an url related middleware look like. app.use(function(req, res, next) { // Check if requested route is a part of the current component // or if the middleware should be passed on any request if (APP.controller.groups.Component.isExpectedRoute(req) || APP.controller.groups.Component.getConfig().MIDDLEWARE_PASS_ALL === true) { // Execute the midleware code here console.log('This is a route which should be afected by middleware'); ... next(); }else{ next(); } });

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  • How to match a period in Regex coming from Firefox browser?

    - by Dr. Zim
    I have the following C# code which should match a quantity / $ price string like "4/$3.99". It works all day long until we use it against a string returned from Firefox Browser. 77.77 becomes 77 (dropping the .77 cents). var matches = Regex.Match(_priceText, @"^\s?((?<qty>\d+)\s?/)?\s?[$]?\s?(?<price>[0-9]?\.?[0-9]?[0-9]?)"); if( matches.Success) { if (!Decimal.TryParse(matches.Groups["price"].Value, out this._price)) this._price = 0.0m; if (!Int32.TryParse(matches.Groups["qty"].Value, out this._qty)) this._qty = (this._price > 0 ? 1 : 0); else if (this._price > 0 && this._qty == 0) this._qty = 1; } Any idea why the period wouldn't match coming from a Firefox string, but the C# string matches? There isn't any special about the Firefox we used. It's a plain Jane 1252 code page download right off the Firefox site. The computer's local settings are unaltered North American, etc. We have two different computers showing the same effects. It's Firefox 3.6.4, nothing fancy or beta.

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