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  • 50 sequences in one line

    - by user343934
    I have alignment file and long record in it. Suppose while displaying to an end user i want to show Sequence ID and 50 sequences in each line and continue further till the end of file. Can anyone suggest me algorithm or example code in python. Thanks in advance

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  • What was your first programming job?

    - by Allyn
    What was your first full time programming job? What did you do? What did you learn? Did you enjoy it? How long did you stay? Sorry for all the sub-questions, but lately I've been thinking about what I'm going to do when I get my degree, and I am interested to know your opinions and experiences.

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  • linq to sql with nservicebus table lock issue

    - by IGoor
    I am building a system using NServiceBus and my DataLayer is using Linq 2 SQL. The system is made up of 2 services. Service1 receives messages from NSB. It will query Table1 in my database and inserts a record into Table1 If a certain condition is met a new NSB message is sent to the 2nd service Service2 will update records also in Table1 when it receives messages from Service1 and it does some other non database related work. Service2 is a long running process. The problem I am having is the moment Service2 updates a record in Table1, the table is locked. The lock seems to be in place until Service2 has completed all it is processing. i.e. The lock is not released after my datacontext is disposed. This causes the query in Service1 to timeout. Once Service2 completes processing, Service1 resumes processing again without problem. So for example Service1 code may look like: int x =0; using (DataContext db = new DataContext()) { x = (from dp in db.Table1 select dp).Count(); // this line will timeout while service2 is processing Table1 t = new Table1(); t.Data = "test"; db.Table1.InsertOnSubmit(t); db.SubmitChanges(); } if(x % 50 == 0) CallService2(); The code in service2 may look like: using (DataContext db = new DataContext()) { Table1 t = db.Table1.Where(t => t.id == myId); t.Data = "updated"; db.SubmitChanges(); } // I would have expected the lock to have been released at this point, but this is not the case. DoSomeLongRunningTasks(); // lock will be released once service2 exits I don't understand why the lock is not released when the datacontext is disposed in Service2. To get around the problem I have been calling: db.ExecuteCommand("SET TRANSACTION ISOLATION LEVEL READ UNCOMMITTED"); and this works, but I am not happy using it. I want to solve this problem properly. Has any one experienced this sort of problem before and does any one know how to solve it? Why is the lock not released after the datacontext has been disposed? Thanks in advance. p.s. sorry for the extremely long post.

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  • How to monitor delayed_job with monit

    - by Luke Francl
    Are there any examples on the web of how to monitor delayed_job with Monit? Everything I can find uses God, but I refuse to use God since long running processes in Ruby generally suck. (The most current post in the God mailing list? God Memory Usage Grows Steadily.) Update: delayed_job now comes with a sample monit config based on this question.

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  • How do you efficiently generate a list of K non-repeating integers between 0 and an upper bound N

    - by tucuxi
    The question gives all necessary data: what is an efficient algorithm to generate a sequence of K non-repeating integers within a given interval. The trivial algorithm (generating random numbers and, before adding them to the sequence, looking them up to see if they were already there) is very expensive if K is large and near enough to N. The algorithm provided here seems more complicated than necessary, and requires some implementation. I've just found another algorithm that seems to do the job fine, as long as you know all the relevant parameters, in a single pass.

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  • Creating directory?

    - by Vineet
    When iam creating directory using sytem as user create directory emp_dir1 AS "'C:\Documents and Settings\Administrator\Desktop\vin.txt"; vin.txt is my file it creates it. same when i do using user Scott it gives an error for path of file that "Identifier is too long" but when i put this file path in single quotes instead of double quotes for scott, it creates it. What is the reason behind?

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  • Meassure website

    - by s0mmer
    Hi, I was wondering if it is possible to install or use any online service to measure your website's performance? I've seen many just checking the download speed of images, external files etc. But is it possible to meassure how long asp/php code takes to execute? I have a site running a bit slowly, and it would be very nice with some app/service guiding where to optimize.

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  • What's the best software development conventions document you have seen?

    - by Pavel Radzivilovsky
    Google C++ development conventions outlaw exceptions, RAII, RTTI and bans the default parameter in parseInt(number, radix=10). Qt API style guide is brilliant, but only covers interfaces. The Robert C. Martin series Clean Code has M104 galaxy on the cover, but it is 462 pages long and based on Java, with no simple "do this" digest. Assuming that it is important to synchronize style and best practices across the organization, what is the smartest, most pleasant and useful conventions document you have worked with?

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  • Load a 6 MB binary file in a SQL Server 2005 VARBINARY(MAX) column using ADO/VC++?

    - by Feroz Khan
    How to load a binary file(.bin) of size 6 MB in a varbinary(MAX) column of SQL Server 2005 database using ADO in a VC++ application. This is the code I am using to load the file which I used to load a .bmp file: BOOL CSaveView::PutECGInDB(CString strFilePath, FieldPtr pFileData) { //Open File CFile fileImage; CFileStatus fileStatus; fileImage.Open(strFilePath,CFile::modeRead); fileImage.GetStatus(fileStatus); //Alocating memory for data ULONG nBytes = (ULONG)fileStatus.m_size; HGLOBAL hGlobal = GlobalAlloc(GPTR,nBytes); LPVOID lpData = GlobalLock(hGlobal); //Putting data into file fileImage.Read(lpData,nBytes); HRESULT hr; _variant_t varChunk; long lngOffset = 0; UCHAR chData; SAFEARRAY FAR *psa = NULL; SAFEARRAYBOUND rgsabound[1]; try { //Create a safe array to store the BYTES rgsabound[0].lLbound = 0; rgsabound[0].cElements = nBytes; psa = SafeArrayCreate(VT_UI1,1,rgsabound); while(lngOffset<(long)nBytes) { chData = ((UCHAR*)lpData)[lngOffset]; hr = SafeArrayPutElement(psa,&lngOffset,&chData); if(hr != S_OK) { return false; } lngOffset++; } lngOffset = 0; //Assign the safe array to a varient varChunk.vt = VT_ARRAY|VT_UI1; varChunk.parray = psa; hr = pFileData->AppendChunk(varChunk); if(hr != S_OK) { return false; } } catch(_com_error &e) { //get info from _com_error _bstr_t bstrSource(e.Source()); _bstr_t bstrDescription(e.Description()); _bstr_t bstrErrorMessage(e.ErrorMessage()); _bstr_t bstrErrorCode(e.Error()); TRACE("Exception thrown for classes generated by #import"); TRACE("\tCode= %08lx\n",(LPCSTR)bstrErrorCode); TRACE("\tCode Meaning = %s\n",(LPCSTR)bstrErrorMessage); TRACE("\tSource = %s\n",(LPCSTR)bstrSource); TRACE("\tDescription = %s\n",(LPCSTR)bstrDescription); } catch(...) { TRACE("***Unhandle Exception***"); } //Free Memory GlobalUnlock(lpData); return true; } But when I read the same file using Getchunk function it gives me all 0s but the size of the file I get is same as the one uploaded. Your help will be highly appreciated.

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  • How to redirect an application's connection through a Socks5/SSH/HTTPS tunnel? Any recomendations of

    - by Pai Gaudêncio
    I need to tunnel the connections (mostly TCP) made by an application through Socks5, SSH or HTTPS. So far, I've found 3 ways to do this: api hooks, winsock lsp and a driver. I'm looking for advice on the best way to handle this, and any recommendations on SDK's that could abstract this task for me (free/open-source preferred, but commercial ones are welcome as long as the price is not high for a one-man-starting-company to afford). ps. I'm using .Net (C# and-or C++/CLI)

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  • How to order by last name on a full name column?

    - by GateKiller
    I have a SQL Table with a column called FullName which contains, for example, "John Smith". How can order the data by the last name that appears in the FullName column? For a long name like "Laurence John Fishburne", I would like to order the data by the word "Fishburne". Thus, names are stored in the order First Name Middle Names Last Name I am using Microsoft SQL Server 2005.

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  • How can I make a single WCF method ConcurrencyMode.Multiple when service is ConcurencyMode.Single

    - by Michael Hedgpeth
    I have a service which is defined as ConcurrencyMode.Single: [ServiceBehavior(ConcurrencyMode = ConcurrencyMode.Single, UseSynchronizationContext = false, InstanceContextMode = InstanceContextMode.PerSession, IncludeExceptionDetailInFaults = true)] public class MyService : IMyService This service provides a method to tell the client what it's currently working on: [OperationContract] string GetCurrentTaskDescription(); Is there a way to make this particular method allowable while another long-running task is running where all other methods still follow the single-threaded concurrency model?

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  • css/html: white space break fix and now cant code fine?

    - by Karem
    Yes, so I got the problem that if you type a long sentence with no space e.g eeeeeeeeeeeeeeeeeeeeeeee, it will break itself, but then now I would need to start typing some ugly non-breaking coding. Example: http://jsfiddle.net/r3CFJ/ I need to have everything in one sentence in order not to make it break itself. Check here to see the result of not having everything in one sentence: http://jsfiddle.net/r3CFJ/1/ How can I fix this please any solutions?? as my further coding will get very ugly and not readable?

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  • Delayed responses for cURL SSL PUTs/POSTs (php) (NSS vs OpenSSL)

    - by Yarin
    I have two Fedora-based apache webservers making the same SSL PUT/POST calls with php/cURL. One works fine, but with the other the call succeeds but takes a VERY long time to return a response (~10 min). (GETs don't seem affected) The working server's cURL uses OpenSSL for SSL, while the non-working version uses a later version of cURL that uses NSS for SSL I know nothing about SSL implementations or their effect on cURL. What would cause such a significant delay in SSL PUT/POST responses? Any suggestions appreciated- Thanks--

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  • How do I find out the expiry date of a SQL Server 2008 trial-install instance?

    - by Peter Mounce
    So I installed a trial of SQL Server 2008 enterprise edition while waiting for MSDN licenses to come through - I now want to uninstall the trial and replace it with a developer edition installation. However, I'd like to first know how long I have left on the trial. Is there a way to do this programmatically with SQL? I looked at create_date in sys.databases, but these give dates that are in 2003 (which is, I guess, when master and model were originally created).

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  • How can I get valgrind to tell me the address of each non-freed block of memory?

    - by James
    Valgrind tells me function xxx allocated memory which was not freed. Fine. It's proving more difficult than usual to trace however. To this end I have created numerous: #ifdef DEBUG fprintf(stderr, "something happening:%lx\n", (unsigned long)ptr); #endif So I just need to match these ptr addresses that are displayed with the addresses of non-freed memory. How can I get valgrind to tell me the address of each non-freed block of memory?

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  • RAD Visual Web Application Creator/ Builder/ Designer for PHP

    - by inhoue
    Hi all, I want to see if any of you know a (free and open source will be ideal) tool/ app that can help build a php web application very quickly without investing too much time on writing codes, preferring drag and drop/ point and click work-flow designer for logic design (see Agile from Outsystems below). Plus, visual designer for the business logic is great since it can help a developer visualize the logic better. There are a lot of GUI builders, form builders out there, but I am looking for one app for the entire web application development process. My goal is to find an application that a team of developers can use together and use the build-in code of the app as much as possible. E.g. the app will provide a modular just for handle user login or a shopping cart; a developer just need to drag and drop the modular to the logic designer and the code will be generated. This way the functionality will be in a module and code will always be standard across developers. So if a new developer get on-board, he will just need to use the system and get up and running quickly. To explain this better: there is a lot php frameworks, e.g. cakephp, CodeIgniter, etc which I can use to help coding, but still I need to create (code) the GUI, writing quite a bit of codes. I am looking for a tool/ app that is a little more high level than those frameworks. Here is 2 examples apps I found during my google search which they have visual logic designer and gui builder in one single app. Also a single click deployment (but I need it to be php apps or at least I can deploy the (php) code to a LAMP/ WAMP server): Wavemaker: for JAVA Agile from Outsystems: for JAVA or .net (This one is really good, with work-flow drag and drop logic designer!) Talend: it is just an ETL tool, but the concept is what I want to bring up. Drag and drop, point and click logic design. Custom code can be added if it is needed, but the drag and drop process already finished the structure and most of the coding of the web app one needs to build. I want to list Adobe Flex, but it is more like a GUI designer + IDE, not exactly what I want to describe here. The drag and drop/ work-flow logic designer is a key for the app. I could go for the CMS route by learning how to extend them, but it is not that flexible for me and is a long learning curve. Anybody came across this type of app before? Or any idea of how can I find those apps? I googled them for long time, I don't see any of them for php and just few (just 2) for Java. Thanks in advance!

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  • Accepting Payment with local debit cards from foreign countries

    - by megatr0n
    Hi all. I have an ecommerce website and I am currently accepting payments from visa, master card and all the other major cards. However, one issue I am having is accepting payment from customers using local debit cards. Say someone from China doesn't have a major credit and he wants to use his local debit card, I want be able to accept payment from him as long as its legal. How do I go about this? Thanks.

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  • Vim (terminal) - copy to x clipboard and paste while suspeneded

    - by gmatt
    I have vimx installed, so I can copy in vimx to the x clipboard by using "+y and the like, which works well as long as I can keep the current vimx running. However, I also love to be able to switch to the current running shell with ctrl-z and be able to paste what I copied from vim into the shell. Does anyone know how to do this, because as soon as I suspend vim with ctr-z the x-clipboard becomes empty, until I put vim into the fg again.

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