Make errors when compiling HPL-2.1 on MOSIX-clustered Debian server
- by tlake
I'm trying to compile HPL 2.1 on a MOSIX-clustered Debian server, but the make process terminates with errors as seen below. Included are my makefile and two versions of output: one from a standard execution, and one from an execution run with the debug flag.
Any help and guidance would be very much appreciated!
The makefile:
# ----------------------------------------------------------------------
# - shell --------------------------------------------------------------
# ----------------------------------------------------------------------
#
SHELL = /bin/bash
#
CD = cd
CP = cp
LN_S = ln -s
MKDIR = mkdir
RM = /bin/rm -f
TOUCH = touch
#
# ----------------------------------------------------------------------
# - Platform identifier ------------------------------------------------
# ----------------------------------------------------------------------
#
ARCH = Linux_PII_CBLAS
#
# ----------------------------------------------------------------------
# - HPL Directory Structure / HPL library ------------------------------
# ----------------------------------------------------------------------
#
TOPdir = $(HOME)/hpl-2.1
INCdir = $(TOPdir)/include
BINdir = $(TOPdir)/bin/$(ARCH)
LIBdir = $(TOPdir)/lib/$(ARCH)
#
HPLlib = $(LIBdir)/libhpl.a
#
# ----------------------------------------------------------------------
# - Message Passing library (MPI) --------------------------------------
# ----------------------------------------------------------------------
# MPinc tells the C compiler where to find the Message Passing library
# header files, MPlib is defined to be the name of the library to be
# used. The variable MPdir is only used for defining MPinc and MPlib.
#
MPdir = /usr/local
MPinc = -I$(MPdir)/include
MPlib = $(MPdir)/lib/libmpi.so
#
# ----------------------------------------------------------------------
# - Linear Algebra library (BLAS or VSIPL) -----------------------------
# ----------------------------------------------------------------------
# LAinc tells the C compiler where to find the Linear Algebra library
# header files, LAlib is defined to be the name of the library to be
# used. The variable LAdir is only used for defining LAinc and LAlib.
#
LAdir = $(HOME)/CBLAS/lib
LAinc =
LAlib = $(LAdir)/cblas_LINUX.a
#
# ----------------------------------------------------------------------
# - F77 / C interface --------------------------------------------------
# ----------------------------------------------------------------------
# You can skip this section if and only if you are not planning to use
# a BLAS library featuring a Fortran 77 interface. Otherwise, it is
# necessary to fill out the F2CDEFS variable with the appropriate
# options. **One and only one** option should be chosen in **each** of
# the 3 following categories:
#
# 1) name space (How C calls a Fortran 77 routine)
#
# -DAdd_ : all lower case and a suffixed underscore (Suns,
# Intel, ...), [default]
# -DNoChange : all lower case (IBM RS6000),
# -DUpCase : all upper case (Cray),
# -DAdd__ : the FORTRAN compiler in use is f2c.
#
# 2) C and Fortran 77 integer mapping
#
# -DF77_INTEGER=int : Fortran 77 INTEGER is a C int, [default]
# -DF77_INTEGER=long : Fortran 77 INTEGER is a C long,
# -DF77_INTEGER=short : Fortran 77 INTEGER is a C short.
#
# 3) Fortran 77 string handling
#
# -DStringSunStyle : The string address is passed at the string loca-
# tion on the stack, and the string length is then
# passed as an F77_INTEGER after all explicit
# stack arguments, [default]
# -DStringStructPtr : The address of a structure is passed by a
# Fortran 77 string, and the structure is of the
# form: struct {char *cp; F77_INTEGER len;},
# -DStringStructVal : A structure is passed by value for each Fortran
# 77 string, and the structure is of the form:
# struct {char *cp; F77_INTEGER len;},
# -DStringCrayStyle : Special option for Cray machines, which uses
# Cray fcd (fortran character descriptor) for
# interoperation.
#
F2CDEFS =
#
# ----------------------------------------------------------------------
# - HPL includes / libraries / specifics -------------------------------
# ----------------------------------------------------------------------
#
HPL_INCLUDES = -I$(INCdir) -I$(INCdir)/$(ARCH) $(LAinc) $(MPinc)
HPL_LIBS = $(HPLlib) $(LAlib) $(MPlib)
#
# - Compile time options -----------------------------------------------
#
# -DHPL_COPY_L force the copy of the panel L before bcast;
# -DHPL_CALL_CBLAS call the cblas interface;
# -DHPL_CALL_VSIPL call the vsip library;
# -DHPL_DETAILED_TIMING enable detailed timers;
#
# By default HPL will:
# *) not copy L before broadcast,
# *) call the BLAS Fortran 77 interface,
# *) not display detailed timing information.
#
HPL_OPTS = -DHPL_CALL_CBLAS
#
# ----------------------------------------------------------------------
#
HPL_DEFS = $(F2CDEFS) $(HPL_OPTS) $(HPL_INCLUDES)
#
# ----------------------------------------------------------------------
# - Compilers / linkers - Optimization flags ---------------------------
# ----------------------------------------------------------------------
#
CC = /usr/bin/gcc
CCNOOPT = $(HPL_DEFS)
CCFLAGS = $(HPL_DEFS) -fomit-frame-pointer -O3 -funroll-loops
#
# On some platforms, it is necessary to use the Fortran linker to find
# the Fortran internals used in the BLAS library.
#
LINKER = ~/BLAS
LINKFLAGS = $(CCFLAGS)
#
ARCHIVER = ar
ARFLAGS = r
RANLIB = echo
#
# ----------------------------------------------------------------------
Make output:
~/BLAS -DHPL_CALL_CBLAS -I/homes/laket/hpl-2.1/include -I/homes/laket/hpl-2.1/include/Linux_PII_CBLAS -I/usr/local/include -fomit-frame-pointer -O3 -funroll-loops -o /homes/laket/hpl-2.1/bin/Linux_PII_CBLAS/xhpl HPL_pddriver.o HPL_pdinfo.o HPL_pdtest.o /homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a /homes/laket/CBLAS/lib/cblas_LINUX.a /usr/local/lib/libmpi.so
/bin/bash: /homes/laket/BLAS: Is a directory
make[2]: *** [dexe.grd] Error 126
make[2]: Target `all' not remade because of errors.
make[2]: Leaving directory `/homes/laket/hpl-2.1/testing/ptest/Linux_PII_CBLAS'
make[1]: *** [build_tst] Error 2
make[1]: Leaving directory `/homes/laket/hpl-2.1'
make: *** [build] Error 2
make: Target `all' not remade because of errors.
Make -d output:
Considering target file `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a'.
Looking for an implicit rule for `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a'.
Trying pattern rule with stem `libhpl.a'.
Trying implicit prerequisite `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a,v'.
Trying pattern rule with stem `libhpl.a'.
Trying implicit prerequisite `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/RCS/libhpl.a,v'.
Trying pattern rule with stem `libhpl.a'.
Trying implicit prerequisite `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/RCS/libhpl.a'.
Trying pattern rule with stem `libhpl.a'.
Trying implicit prerequisite `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/s.libhpl.a'.
Trying pattern rule with stem `libhpl.a'.
Trying implicit prerequisite `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/SCCS/s.libhpl.a'.
No implicit rule found for `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a'.
Finished prerequisites of target file `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a'.
No need to remake target `/homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a'.
Finished prerequisites of target file `dexe.grd'.
Must remake target `dexe.grd'.
~/BLAS -DHPL_CALL_CBLAS -I/homes/laket/hpl-2.1/include -I/homes/laket/hpl-2.1/include/Linux_PII_CBLAS -I/usr/local/include -fomit-frame-pointer -O3 -funroll-loops -o /homes/laket/hpl-2.1/bin/Linux_PII_CBLAS/xhpl HPL_pddriver.o HPL_pdinfo.o HPL_pdtest.o /homes/laket/hpl-2.1/lib/Linux_PII_CBLAS/libhpl.a /homes/laket/CBLAS/lib/cblas_LINUX.a /usr/local/lib/libmpi.so
Putting child 0x0129a2c0 (dexe.grd) PID 24853 on the chain.
Live child 0x0129a2c0 (dexe.grd) PID 24853
/bin/bash: /homes/laket/BLAS: Is a directory
make[2]: Reaping losing child 0x0129a2c0 PID 24853
*** [dexe.grd] Error 126
Removing child 0x0129a2c0 PID 24853 from chain.
Failed to remake target file `dexe.grd'.
Finished prerequisites of target file `dexe'.
Giving up on target file `dexe'.
Finished prerequisites of target file `all'.
Giving up on target file `all'.
make[2]: Target `all' not remade because of errors.
make[2]: Leaving directory `/homes/laket/hpl-2.1/testing/ptest/Linux_PII_CBLAS'
Reaping losing child 0x010ce900 PID 24841
make[1]: *** [build_tst] Error 2
Removing child 0x010ce900 PID 24841 from chain.
Failed to remake target file `build_tst'.
make[1]: Leaving directory `/homes/laket/hpl-2.1'
Reaping losing child 0x00d91ae0 PID 24774
make: *** [build] Error 2
Removing child 0x00d91ae0 PID 24774 from chain.
Failed to remake target file `build'.
Finished prerequisites of target file `install'.
make: Target `all' not remade because of errors. Giving up on target file `install'.
Finished prerequisites of target file `all'.
Giving up on target file `all'.
Thanks!
