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  • Pointers, am I doing them correctly? Objective-c/cocoa

    - by Chris
    I have this in my @interface struct track currentTrack; struct track previousTrack; int anInt; Since these are not objects, I do not have to have them like int* anInt right? And if setting non-object values like ints, boolean, etc, I do not have to release the old value right (assuming non-GC environment)? The struct contains objects: typedef struct track { NSString* theId; NSString* title; } *track; Am I doing that correctly? Lastly, I access the struct like this: [currentTrack.title ...]; currentTrack.theId = @"asdf"; //LINE 1 I'm also manually managing the memory (from a setter) for the struct like this: [currentTrack.title autorelease]; currentTrack.title = [newTitle retain]; If I'm understanding the garbage collection correctly, I should be able to ditch that and just set it like LINE 1 (above)? Also with garbage collection, I don't need a dealloc method right? If I use garbage collection does this mean it only runs on OS 10.5+? And any other thing I should know before I switch to garbage collected code? Sorry there are so many questions. Very new to objective-c and desktop programming. Thanks

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  • Visual studio feature - commenting code Ctrl K - Ctrl C

    - by Michael
    I commented on this answer some time ago regarding how visual studio comments out code with // or /* */. I was thinking to revise the answer (to include my findings) but I had to test it first, which kind of confused me. My finding is that depending on where your marker is when you press Ctrl - K, Ctrl - C you will get either // or /* */. So I tried it out on the following code: [1] [2]FD_ZERO(&mFSet); FD_SET(user->mSender, &mFSet); timeval zeroTime = { 0, 0 }; int sel = select(0, NULL, &mFSet, NULL, &zeroTime); [3] if (sel == SOCKET_ERROR){ [5]return false; [4] } if (sel == 0){ [6] return false; [7] } The [x] is markerpositions. All [1] positions give // for all marked lines. However Start position End Position: gives: [2] [3] : /* */ [2] [4] : // [2] [5] : /* */ [2] [more than 5] : // [5] [6] : /* */ [5] [7] : // I guess it has to do with forward indentation (not backwards), that whenever code is indented more than the starting line you get // except when you haven't selected any text on the indented line ([2] [5]). But why the distinction? Why not use /* */ for when you start at [2] and // when you start at [1]?

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  • "One or more breakpoints cannot be set and have been disabled. Execution will stop at the beginning

    - by sam
    I set a breakpoint in my code in Visual-C++, but when I run, I see the error mentioned in the title. I know this question has been asked before on Stack Overflow (http://stackoverflow.com/questions/657470/breakpoints-cannot-be-set-and-have-been-disabled-problem), but none of the answers there fully explained the problem I'm seeing. The closest I can see is something about the linker, but I don't understand that - so if someone could explain in more detail that would be great. In my case, I have 2 projects in Visual C++ - the production dsw, and the test code dsw. I have loaded and rebuilt both dsws in debug mode. I want a breakpoint in the production code, which is run via the test scripts. My issue is I get the error message when I run the test code, because the break point is in the production code, which isn't loaded up when the test starts. Near the beginning of the test script there is a mytest_initialize() command. I imagine this goes off and loads up the production dll. Once this line has executed, I can put the breakpoint in my production code and run until I hit it. But it's quite annoying to have to run to this line, set the breakpoint and continue every time I want to run the test. So I think the problem is Visual C++ doesn't realise the two projects are related. Is this a linker issue? What does the linker do and what settings should I change to make this work? Thanks in advance. Apologies if instead I should be appending this question to the existing one, this is my first post so not quite sure how this should work.

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  • PHP: SimpleXML and Arrays

    - by acemasta
    When I run this code: foreach($xml->movie as $movie) { if(isset($movie->photos)) { foreach ($movie->photos as $photo) { echo $photo."&nbsp;"; } echo "<hr/>"; } } I get nice output of the actual data, e.g. a row looks like 06397001.jpg 06397002.jpg 06397003.jpg 06397004.jpg 06397005.jpg But when I throw it in an array, it includes all the SimpleXML wrapper tags and the jpgs are not at the root of the array. code: foreach($xml->movie as $movie) { if(isset($movie->photos)) { $photos = array(); foreach ($movie->photos as $photo) { $photos[] = $photo; } } else $photos = ""; var_dump($photos); echo "<hr />"; } e.g. same row looks like array(5) { [0]= object(SimpleXMLElement)#11 (1) { [0]= string(12) "06397001.jpg" } [1]= object(SimpleXMLElement)#12 (1) { [0]= string(12) "06397002.jpg" } [2]= object(SimpleXMLElement)#13 (1) { [0]= string(12) "06397003.jpg" } [3]= object(SimpleXMLElement)#14 (1) { [0]= string(12) "06397004.jpg" } [4]= object(SimpleXMLElement)#15 (1) { [0]= string(12) "06397005.jpg" } } Why is this happening/how can I remove this so I just get an array of the photos at root level like when I echo it? Thanks, sorry for the single line code formatting; was messing up when I tried to paste directly with line breaks.

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  • C++ Program Flow: Sockets in an Object and the Main Function

    - by jfm429
    I have a rather tricky problem regarding C++ program flow using sockets. Basically what I have is this: a simple command-line socket server program that listens on a socket and accepts one connection at a time. When that connection is lost it opens up for further connections. That socket communication system is contained in a class. The class is fully capable of receiving the connections and mirroring the data received to the client. However, the class uses UNIX sockets, which are not object-oriented. My problem is that in my main() function, I have one line - the one that creates an instance of that object. The object then initializes and waits. But as soon as a connection is gained, the object's initialization function returns, and when that happens, the program quits. How do I somehow wait until this object is deleted before the program quits? Summary: main() creates instance of object Object listens Connection received Object's initialization function returns main() exits (!) What I want is for main() to somehow delay until that object is finished with what it's doing (aka it will delete itself) before it quits. Any thoughts?

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  • How do you slow down the output from a DOS / windows command prompt

    - by JW
    I have lots of experience of writing php scripts that are run in the context of a webserver and almost no epxerience of writing php scripts for CLI or GUI output. I have used the command line for linux but do not have much expereince with DOS. Lets say I have php script that is: <?php echo('Hello world'); for ($idx = 0 ; $idx < 100 ; $idx++ ) { echo 'I am line '. $idx . PHP_EOL; } Then, I run it in my DOS Command prompt: # php helloworld.php Now this will spurt out the output quckly and i have to scroll the DOS command window up to see the output. I want to see the output one 'screen full' at a time. How do you do that from the perspective of a DOS user? Furthermore, although this is not my main main question, I would be also interested in knowing how to make the php script 'wait for input' from the command prompt.

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  • ORACLE: can we create global temp tables or any tables in stored proc?

    - by mrp
    Hi, below is the stored proc I wrote: create or replace procedure test005 as begin CREATE GLOBAL TEMPORARY TABLE TEMP_TRAN ( COL1 NUMBER(9), COL2 VARCHAR2(30), COL3 DATE ) ON COMMIT PRESERVE ROWS / INSERT INTO TEMP_TRAN VALUES(1,'D',sysdate); INSERT INTO TEMP_TRAN VALUES(2,'I',sysdate); INSERT INTO TEMP_TRAN VALUES(3,'s',sysdate); COMMIT; end; when i executed it , i get an error message mentioning: create or replace procedure test005 as begin CREATE GLOBAL TEMPORARY TABLE TEMP_TRAN ( COL1 NUMBER(9), COL2 VARCHAR2(30), COL3 DATE ) ON COMMIT PRESERVE ROWS / INSERT INTO TEMP_TRAN VALUES(1,'D',sysdate); INSERT INTO TEMP_TRAN VALUES(2,'I',sysdate); INSERT INTO TEMP_TRAN VALUES(3,'s',sysdate); COMMIT; end; Error at line 1 ORA-00955: name is already used by an existing object Script Terminated on line 1. I tried to drop the TEMP_TRAN and it says table doesn't exist. So there is no TEMP_TRAN table existed in system. why am I getting this error? I am using TOAD to create this stored proc. Any help would be highly appreciated.

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  • Problem with UPDATE statement in stored-procedure in Oracle Database

    - by MKP
    Hello, I have stored-procedure in Oracle database like this: create or replace PROCEDURE EDYTUJ_PRACOWNIKA (PR_IMIE IN VARCHAR2, PR_NAZWISKO IN VARCHAR2, PR_PENSJA IN FLOAT, PR_PRZELOZONY IN NUMBER, PR_ODDZIAL IN NUMBER, PRAC_ID IN NUMBER) AS tmpPensja FLOAT := 0; tmpPrzel NUMBER := 0; BEGIN select przelozony into tmpPrzel from pracownik where id = PRAC_ID; IF(tmpPrzel IS NOT NULL) THEN select pensja into tmpPensja from pracownik where id = tmpPrzel; IF(tmpPensja < 1150) THEN UPDATE PRACOWNIK SET pensja = 1000 WHERE id = tmpPrzel; ELSE UPDATE PRACOWNIK SET pensja = pensja - 150 WHERE id = tmpPrzel; (4) END IF; END IF; IF(PR_PRZELOZONY > 0) THEN UPDATE PRACOWNIK SET imie = PR_IMIE, nazwisko = PR_NAZWISKO, pensja = PR_PENSJA, przelozony = PR_PRZELOZONY, oddzial = PR_ODDZIAL WHERE id = PRAC_ID; (2) select pensja into tmpPensja from pracownik where id = PR_PRZELOZONY; IF(tmpPensja > 4850) THEN UPDATE PRACOWNIK SET pensja = 5000 WHERE id = PR_PRZELOZONY; ELSE UPDATE PRACOWNIK SET pensja = pensja + 150 WHERE id = PR_PRZELOZONY; (1) END IF; ELSE UPDATE PRACOWNIK SET imie = PR_IMIE, nazwisko = PR_NAZWISKO, pensja = PR_PENSJA, przelozony = NULL, oddzial = PR_ODDZIAL WHERE ID = PRAC_ID; (3) END IF; END; where przelozony and pensja are columns in pracownik table. And I have problem that when running procedure with parameters that provide that line marked with "(1)" (there is the same problem with line marked with "(4)") should be executed that update statement don't have any effect. What's more statements in lines marked with "(2)" and "(3)" works fine. I have no ideas how to fix it. Thank you in advance for your help.

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  • What is an elegant way to set up a leiningen project that requires different dependencies based on the build platform?

    - by Savanni D'Gerinel
    In order to do some multi-platform GUI development, I have just switched from GTK + Clojure (because it looks like the Java bindings for GTK never got ported to Windows) to SWT + Clojure. So far, so good in that I have gotten an uberjar built for Linux. The catch, though, is that I want to build an uberjar for Windows and I am trying to figure out a clean way to manage the project.clj file. At first, I thought I would set the classpath to point to the SWT libraries and then build the uberjar. This would require that I set a classpath to the SWT libraries before running the jar, but I would likely need a launcher script, anyway. However, leiningen seems to ignore the classpath in this instance because it always reports that Currently, project.clj looks like this for me: (defproject alyra.mana-punk/character "1.0.0-SNAPSHOT" :description "FIXME: write" :dependencies [[org.clojure/clojure "1.2.0"] [org.clojure/clojure-contrib "1.2.0"] [org.eclipse/swt-gtk-linux-x86 "3.5.2"]] :main alyra.mana-punk.character.core) The relevant line is the org.eclipse/swt-gtk-linux-x86 line. If I want to make an uberjar for Windows, I have to depend on org.eclipse/swt-win32-win32-x86, and another one for x86-64, and so on and so forth. My current solution is to simply create a separate branch for each build environment with a different project.clj. This seems kinda like using a semi to deliver a single gallon of milk, but I am using bazaar for version control, so branching and repeated integrations are easy. Maybe the better way is to have a project.linux.clj, project.win32.clj, etc, but I do not see any way to tell leiningen which project descriptor to use. What are other (preferably more elegant) ways to set up such an environment?

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  • SystemStackError in Rails::ActiveSupport::Callbacks

    - by coreyward
    I'm building a Rails app that connects to Dropbox and syncs with a folder to update a personal site. I'm using Rails 3.0.3, Ruby 1.9.2, and the Dropbox gem. Right now I have a DropboxAccounts Controller, and two models: DropboxSession, which wraps calls to the gem with application-specific functionality, and DropboxAccount, which stores the session and settings in the database. After the user authorizes their account with Dropbox they're redirected back over and the DropboxAccount is saved with the authorized session. That all works just fine. My problem is that when I try to call Dropbox::API#create_folder(any path) I end up with a SystemStackError in lib/activesupport/callbacks.rb:421 which refers to the code below. If I remove the call to create the folder, it works. If I call create folder from another request, it works. I doubled the stack size to 16K to no avail. # This is called the first time a callback is called with a particular # key. It creates a new callback method for the key, calculating # which callbacks can be omitted because of per_key conditions. # def __create_keyed_callback(name, kind, object, &blk) #:nodoc: @_keyed_callbacks ||= {} @_keyed_callbacks[name] ||= begin str = send("_#{kind}_callbacks").compile(name, object) class_eval <<-RUBY_EVAL, __FILE__, __LINE__ + 1 def #{name}() #{str} end # THIS IS LINE 421 protected :#{name} RUBY_EVAL true end end I'm not very familiar with Rails yet, and I'm not sure what the intention of the code above is or why it would cause a stack overflow. I'm not using any method_missing/ghost method magic in my code. I suspected it was something with a callback serialize :files but commenting it out did nothing. My DropboxAccount model contains only a call to belongs_to :user, and DropboxSession is just a handful of methods, none of which contain callbacks. Bypassing them and using the Dropbox::Session methods directly doesn't help. I hope someone on StackOverflow can help me with this stack overflow. ;)

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  • How to generate a monotone MART ROC in R?

    - by user1521587
    I am using R and applying MART (Alg. for multiple additive regression trees) on a training set to build prediction models. When I look at the ROC curve, it is not monotone. I would be grateful if someone can help me with how I should fix this. I am guessing the issue is that initially, MART generates n trees and if these trees are not the same for all the models I am building, the results will not be comparable. Here are the steps I take: 1) Fix the false-negative cost, c_fn. Let cost = c(0, 1, c_fn, 0). 2) use the following line to build the mart model: mart(x, y, lx, martmode='class', niter=2000, cost.mtx=cost) where x is the matrix of training set variables, y is the observation matrix, lx is the matrix which specifies which of the variables in x is numerical, which one categorical. 3) I predict the test set observations using the mart model found in step 2 using this line: y_pred = martpred(x_test, probs=T) 4) I compute the false-positive and false-negative errors as follows: t = 1/(1+c_fn) %threshold based on Bayes optimal rule where c_fp=1 and c_fn. p_0 = length(which(y_test==1))/dim(y_test)[1] p_01 = sum(1*(y_pred[,2]t & y_test==0))/dim(y_test)[1] p_11 = sum(1*(y_pred[,2]t & y_test==1))/dim(y_test)[1] p_fp = p_01/(1-p_0) p_tp = p_11/p_0 5) repeat step 1-4 for a new false-negative cost.

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  • javascript: "Object doesn't support this property or method" when ActiveX object called.

    - by agnieszka
    I've got simple html on Login.aspx with an ActiveX object: <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html> <head><title></title> <script language="javaScript" type="text/javascript"> function getUserInfo() { var userInfo = MyActiveX.GetInfo(); form1.info.value = userInfo; form1.submit(); } </script> </head> <body onload="javascript:getUserInfo()"> <object id="MyActiveX" name="MyActiveX" codebase="MyActiveX.cab" classid="CLSID:C63E6630-047E-4C31-H457-425C8412JAI25"></object> <form name="form1" method="post" action="Login.aspx"> <input type="hidden" id="info" name="info" value="" /> </form> </body> </html> The code works perfectly fine on my machine (edit: hosted and run), it does't work on the other: there is an error "Object doesn't support this property or method" in the first line of javascript function. The cab file is in the same folder as the page file. I don't know javascript at all and have no idea why is the problem occuring. Googling didn't help. Do you ave any idea? Edit: on both machines IE was used and activex was enabled. Edit2: I also added if (document.MyActiveX) at the beggining of the function and I still get error in the same line of code - I mean it looks like document.MyActiveX is true but calling the method still fails

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  • setting the openCV configuration in an openGL project produce several errors

    - by GolSa
    I have a win32 solution which is set for openGL; it works well; but I want to write a function which use functions of openCV; I set the configuration for openCV for both X86 and X64;;I commented the openCV function and just to test the correctness of configuration, I run it; but when I want to run it on X64 I faced with the error below: Error 1 error C2065: 'GWL_HINSTANCE' : undeclared identifier D:\matrix\matrixProjection\src\ControllerMain.cpp 35 1 matrixProjection Error 2 error C2664: 'CreateDialogParamW' : cannot convert parameter 4 from 'BOOL (__cdecl *)(HWND,UINT,WPARAM,LPARAM)' to 'DLGPROC' D:\matrix\matrixProjection\src\DialogWindow.cpp 47 1 matrixProjection Error 2 points to this line of code: HWND DialogWindow::create() { /*-->this line*/ handle = ::CreateDialogParam(instance, MAKEINTRESOURCE(id), parentHandle, Win::dialogProcedure, (LPARAM)controller); return handle; } but on Debug Win32 configure, it runs; I used openGL32 in my project; is there any probability to be the cause? is there any X64 version for openGL? I know that there is something needed in X64 mode which my solution can not handle it; I googled a lot about it but I did not find any solution; How can I solve that?

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  • Git-Based Source Control in the Enterprise: Suggested Tools and Practices?

    - by Bob Murphy
    I use git for personal projects and think it's great. It's fast, flexible, powerful, and works great for remote development. But now it's mandated at work and, frankly, we're having problems. Out of the box, git doesn't seem to work well for centralized development in a large (20+ developer) organization with developers of varying abilities and levels of git sophistication - especially compared with other source-control systems like Perforce or Subversion, which are aimed at that kind of environment. (Yes, I know, Linus never intended it for that.) But - for political reasons - we're stuck with git, even if it sucks for what we're trying to do with it. Here are some of the things we're seeing: The GUI tools aren't mature Using the command line tools, it's far to easy to screw up a merge and obliterate someone else's changes It doesn't offer per-user repository permissions beyond global read-only or read-write privileges If you have a permission to ANY part of a repository, you can do that same thing to EVERY part of the repository, so you can't do something like make a small-group tracking branch on the central server that other people can't mess with. Workflows other than "anything goes" or "benevolent dictator" are hard to encourage, let alone enforce It's not clear whether it's better to use a single big repository (which lets everybody mess with everything) or lots of per-component repositories (which make for headaches trying to synchronize versions). With multiple repositories, it's also not clear how to replicate all the sources someone else has by pulling from the central repository, or to do something like get everything as of 4:30 yesterday afternoon. However, I've heard that people are using git successfully in large development organizations. If you're in that situation - or if you generally have tools, tips and tricks for making it easier and more productive to use git in a large organization where some folks are not command line fans - I'd love to hear what you have to suggest. BTW, I've asked a version of this question already on LinkedIn, and got no real answers but lots of "gosh, I'd love to know that too!"

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  • git: remove 2nd commit

    - by cwolves
    I'm trying to remove the 2nd commit to a repo. At this point I could just blow away the .git dir and re-do it, but I'm curious how to do this... I've deleted commits before, but apparently never the 2nd one :) > git log commit c39019e4b08497406c53ceb532f99801793205ca Author: Me Date: Thu Mar 22 14:02:41 2012 -0700 Initializing registry directories commit 535dce28f1c68e8af9d22bc653aca426fb7825d8 Author: Me Date: Tue Jan 31 21:04:13 2012 -0800 First Commit > git rebase -i HEAD~2 fatal: Needed a single revision invalid upstream HEAD~2 > git rebase -i HEAD~1 at which point I get in my editor: pick c39019e Initializing registry directories # Rebase 535dce2..c39019e onto 535dce2 # # Commands: # p, pick = use commit # r, reword = use commit, but edit the commit message # e, edit = use commit, but stop for amending # s, squash = use commit, but meld into previous commit # f, fixup = like "squash", but discard this commit's log message # x, exec = run command (the rest of the line) using shell # # If you remove a line here THAT COMMIT WILL BE LOST. # However, if you remove everything, the rebase will be aborted. # Now my problem is that I can't just blow away this 2nd commit since "if you remove everything, the rebase will be aborted"

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  • convert date error when retrieving data in twig page through doctrine

    - by user201892
    I just find this error when I retrieve all my records on twig page from the database through doctrine here is my twig code : {% extends "gestionConferenceApplicationBundle::layout.html.twig" %} {% block title "Hello " ~ name %} {% block content %} je suis un debutant <table border=2 > <th>Numéro</th> <th>Titre</th> <th>Ville</th> <th>Lieu</th> <th>Date de début</th> <th>Date de fin</th> {% for item in conferences %} <tr> <td>{{ item.id }}</td> <td>{{ item.titre }}</td> <td>{{ item.ville }}</td> <td>{{ item.lieu }}</td>* <td>{{ item.dateDebut }}</td> <td>{{ item.dateFin }}</td> </tr> {% endfor %} </table> {% endblock %} the error in the date : here it is : An exception has been thrown during the rendering of a template ("Catchable Fatal Error: Object of class DateTime could not be converted to string in C:\wamp\www\Symfony\app\cache\dev\twig\3c\dd\40a703549de9b8769fa40b82230e.php line 72") in gestionConferenceApplicationBundle:acceuil:acceuil.html.twig at line 19. do you have any idea how to convert this date or any other things in the MySql I have dateTime field and in doctrine I have : /** * @var \DateTime $dateDebut * * @ORM\Column(name="date_debut", type="datetime", nullable=false) */ private $dateDebut;

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  • real time stock quotes, StreamReader performance optimization

    - by sean717
    I am working on a program that extracts real time quote for 900+ stocks from a website. I use HttpWebRequest to send HTTP request to the site and store the response to a stream and open a stream using the following code: HttpWebResponse response = (HttpWebResponse)request.GetResponse(); Stream stream = response.GetResponseStream (); StreamReader reader = new StreamReader( stream ) the size of the received HTML is large (5000+ lines), so it takes a long time to parse it and extract the price. For 900 files, It takes about 6 mins for parsing and extracting. Which my boss isn't happy with, he told me he'd want the whole process to be done in TWO mins. I've identified the part of the program that takes most of time to finish is parsing and extracting. I've tried to optimize the code to make it faster, the following is what I have now after some optimization: // skip lines at the top for(int i=0;i<1500;++i) reader.ReadLine(); // read the line that contains the price string theLine = reader.ReadLine(); // ... extract the price from the line now it takes about 4 mins to process all the files, there is still a significant gap to what my boss's expecting. So I am wondering, is there other way that I can further speed up the parsing and extracting and have everything done within 2 mins?

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  • Parsing Chunk of Data into Hash of Array With Perl

    - by neversaint
    I have data that looks like this: #info #info2 1:SRX004541 Submitter: UT-MGS, UT-MGS Study: Glossina morsitans transcript sequencing project(SRP000741) Sample: Glossina morsitans(SRS002835) Instrument: Illumina Genome Analyzer Total: 1 run, 8.3M spots, 299.9M bases Run #1: SRR016086, 8330172 spots, 299886192 bases 2:SRX004540 Submitter: UT-MGS Study: Anopheles stephensi transcript sequencing project(SRP000747) Sample: Anopheles stephensi(SRS002864) Instrument: Solexa 1G Genome Analyzer Total: 1 run, 8.4M spots, 401M bases Run #1: SRR017875, 8354743 spots, 401027664 bases 3:SRX002521 Submitter: UT-MGS Study: Massive transcriptional start site mapping of human cells under hypoxic conditions.(SRP000403) Sample: Human DLD-1 tissue culture cell line(SRS001843) Instrument: Solexa 1G Genome Analyzer Total: 6 runs, 27.1M spots, 977M bases Run #1: SRR013356, 4801519 spots, 172854684 bases Run #2: SRR013357, 3603355 spots, 129720780 bases Run #3: SRR013358, 3459692 spots, 124548912 bases Run #4: SRR013360, 5219342 spots, 187896312 bases Run #5: SRR013361, 5140152 spots, 185045472 bases Run #6: SRR013370, 4916054 spots, 176977944 bases What I want to do is to create a hash of array with first line of each chunk as keys and SR## part of lines with "^Run" as its array member: $VAR = { 'SRX004541' => ['SRR016086'], # etc } But why my construct doesn't work. And it must be a better way to do it. use Data::Dumper; my %bighash; my $head = ""; my @temp = (); while ( <> ) { chomp; next if (/^\#/); if ( /^\d{1,2}:(\w+)/ ) { print "$1\n"; $head = $1; } elsif (/^Run \#\d+: (\w+),.*/){ print "\t$1\n"; push @temp, $1; } elsif (/^$/) { push @{$bighash{$head}}, [@temp]; @temp =(); } } print Dumper \%bighash ;

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  • Faster way to split a string and count characters using R?

    - by chrisamiller
    I'm looking for a faster way to calculate GC content for DNA strings read in from a FASTA file. This boils down to taking a string and counting the number of times that the letter 'G' or 'C' appears. I also want to specify the range of characters to consider. I have a working function that is fairly slow, and it's causing a bottleneck in my code. It looks like this: ## ## count the number of GCs in the characters between start and stop ## gcCount <- function(line, st, sp){ chars = strsplit(as.character(line),"")[[1]] numGC = 0 for(j in st:sp){ ##nested ifs faster than an OR (|) construction if(chars[[j]] == "g"){ numGC <- numGC + 1 }else if(chars[[j]] == "G"){ numGC <- numGC + 1 }else if(chars[[j]] == "c"){ numGC <- numGC + 1 }else if(chars[[j]] == "C"){ numGC <- numGC + 1 } } return(numGC) } Running Rprof gives me the following output: > a = "GCCCAAAATTTTCCGGatttaagcagacataaattcgagg" > Rprof(filename="Rprof.out") > for(i in 1:500000){gcCount(a,1,40)}; > Rprof(NULL) > summaryRprof(filename="Rprof.out") self.time self.pct total.time total.pct "gcCount" 77.36 76.8 100.74 100.0 "==" 18.30 18.2 18.30 18.2 "strsplit" 3.58 3.6 3.64 3.6 "+" 1.14 1.1 1.14 1.1 ":" 0.30 0.3 0.30 0.3 "as.logical" 0.04 0.0 0.04 0.0 "as.character" 0.02 0.0 0.02 0.0 $by.total total.time total.pct self.time self.pct "gcCount" 100.74 100.0 77.36 76.8 "==" 18.30 18.2 18.30 18.2 "strsplit" 3.64 3.6 3.58 3.6 "+" 1.14 1.1 1.14 1.1 ":" 0.30 0.3 0.30 0.3 "as.logical" 0.04 0.0 0.04 0.0 "as.character" 0.02 0.0 0.02 0.0 $sampling.time [1] 100.74 Any advice for making this code faster?

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  • Initializing Detail View from nib with parameters passed from Root View

    - by culov
    I'm have a map view with a number of annotations on it... once the callout is clicked, i need to pass several parameters to the DetailViewController, so ive been trying to do this through the constructor. I've debugged a bit and discovered that the arguments are being passed properly and are being received as expected within the constructor, but for some reason whenever I try to change the values of the IBOutlets I've positioned in the nib, it never has an effect. Here's what im passing (btw, im getting a "No initWithNibName : bundle : header' method found" warning at this line): DetailViewController *dvc = [[DetailViewController alloc] initWithNibName:@"DetailViewController" bundle:nil header:headerText]; [self.navigationController pushViewController:dvc animated:YES]; Now heres my constructor: - (id)initWithNibName:(NSString *)nibNameOrNil bundle:(NSBundle *)nibBundleOrNil header:(UILabel*)headerLabel { if ((self = [super initWithNibName:nibNameOrNil bundle:nibBundleOrNil])) { self.headerTextView = headerLabel; NSLog(@"header:%@", headerLabel.text); } return self; } Once again, the problem is that headerLabel.text is printed properly in the console, but the line self.headerTextView = headerLabel; doesnt seem to be doing what I want it to do. Thanks!

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  • Parse a CSV file using python (to make a decision tree later)

    - by Margaret
    First off, full disclosure: This is going towards a uni assignment, so I don't want to receive code. :). I'm more looking for approaches; I'm very new to python, having read a book but not yet written any code. The entire task is to import the contents of a CSV file, create a decision tree from the contents of the CSV file (using the ID3 algorithm), and then parse a second CSV file to run against the tree. There's a big (understandable) preference to have it capable of dealing with different CSV files (I asked if we were allowed to hard code the column names, mostly to eliminate it as a possibility, and the answer was no). The CSV files are in a fairly standard format; the header row is marked with a # then the column names are displayed, and every row after that is a simple series of values. Example: # Column1, Column2, Column3, Column4 Value01, Value02, Value03, Value04 Value11, Value12, Value13, Value14 At the moment, I'm trying to work out the first part: parsing the CSV. To make the decisions for the decision tree, a dictionary structure seems like it's going to be the most logical; so I was thinking of doing something along these lines: Read in each line, character by character If the character is not a comma or a space Append character to temporary string If the character is a comma Append the temporary string to a list Empty string Once a line has been read Create a dictionary using the header row as the key (somehow!) Append that dictionary to a list However, if I do things that way, I'm not sure how to make a mapping between the keys and the values. I'm also wondering whether there is some way to perform an action on every dictionary in a list, since I'll need to be doing things to the effect of "Everyone return their values for columns Column1 and Column4, so I can count up who has what!" - I assume that there is some mechanism, but I don't think I know how to do it. Is a dictionary the best way to do it? Would I be better off doing things using some other data structure? If so, what?

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  • Launch a new page in Zend/php on button click

    - by BlueMonster
    PHP & Zend Noob here I've downloaded the skeleton project from here: https://github.com/zendframework/ZendSkeletonApplication Say i want to open a new page that simply displays "hello world" text if click on the "ZF2 Development Portal" button(bottom left green button) on the page that launches --- how do i do this? See image: I've read through this tutorial, but i'm not sure how the model, view, or controller are actually launched? See tutorial: http://blog.wilgucki.pl/2012/07/tworzenie-modulw-w-zend-framework-2.html From looking at the code, i know that i will have to change this line of code: <div class="span4"> <h2><?php echo $this->translate('Follow Development') ?></h2> <p><?php echo sprintf($this->translate('Zend Framework 2 is under active development. If you are interested in following the development of ZF2, there is a special ZF2 portal on the official Zend Framework website which provides links to the ZF2 %swiki%s, %sdev blog%s, %sissue tracker%s, and much more. This is a great resource for staying up to date with the latest developments!'), '<a href="http://framework.zend.com/wiki/display/ZFDEV2/Home">', '</a>', '<a href="http://framework.zend.com/zf2/blog">', '</a>', '<a href="http://framework.zend.com/issues/browse/ZF2">', '</a>') ?></p> <p><a class="btn btn-success" href="http://framework.zend.com/zf2" target="_blank"><?php echo $this->translate('ZF2 Development Portal') ?> &raquo;</a></p> </div> More specifically this line: <p><a class="btn btn-success" href="http://framework.zend.com/zf2" target="_blank"><?php echo $this->translate('ZF2 Development Portal') ?> &raquo;</a></p> but i'm really confused as to what i'm supposed to change it to in order to launch a new page. Any ideas? Thanks in advance!

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  • SQL Server service broker reporting as off when I have written a query to turn it on

    - by dotnetdev
    I have made a small ASP.NET website. It uses sqlcachedependency The SQL Server Service Broker for the current database is not enabled, and as a result query notifications are not supported. Please enable the Service Broker for this database if you wish to use notifications. Description: An unhandled exception occurred during the execution of the current web request. Please review the stack trace for more information about the error and where it originated in the code. Exception Details: System.InvalidOperationException: The SQL Server Service Broker for the current database is not enabled, and as a result query notifications are not supported. Please enable the Service Broker for this database if you wish to use notifications. Source Error: Line 12: System.Data.SqlClient.SqlDependency.Start(connString); This is the erroneous line in my global.asax. However, in sql server (2005), I enabled service broker like so (I connect and run the SQL Server service when I debug my site): ALTER DATABASE mynewdatabase SET ENABLE_BROKER with rollback immediate And this was successful. What am I missing? I am trying to use sql caching dependency and have followed all procedures. Thanks

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  • Pymedia video encoding failed

    - by user1474837
    I am using Python 2.5 with Windows XP. I am trying to make a list of pygame images into a video file using this function. I found the function on the internet and edited it. It worked at first, than it stopped working. This is what it printed out: Making video... Formating 114 Frames... starting loop making encoder Frame 1 process 1 Frame 1 process 2 Frame 1 process 2.5 This is the error: Traceback (most recent call last): File "ScreenCapture.py", line 202, in <module> makeVideoUpdated(record_files, video_file) File "ScreenCapture.py", line 151, in makeVideoUpdated d = enc.encode(da) pymedia.video.vcodec.VCodecError: Failed to encode frame( error code is 0 ) This is my code: def makeVideoUpdated(files, outFile, outCodec='mpeg1video', info1=0.1): fw = open(outFile, 'wb') if (fw == None) : print "Cannot open file " + outFile return if outCodec == 'mpeg1video' : bitrate= 2700000 else: bitrate= 9800000 start = time.time() enc = None frame = 1 print "Formating "+str(len(files))+" Frames..." print "starting loop" for img in files: if enc == None: print "making encoder" params= {'type': 0, 'gop_size': 12, 'frame_rate_base': 125, 'max_b_frames': 90, 'height': img.get_height(), 'width': img.get_width(), 'frame_rate': 90, 'deinterlace': 0, 'bitrate': bitrate, 'id': vcodec.getCodecID(outCodec) } enc = vcodec.Encoder(params) # Create VFrame print "Frame "+str(frame)+" process 1" bmpFrame= vcodec.VFrame(vcodec.formats.PIX_FMT_RGB24, img.get_size(), # Covert image to 24bit RGB (pygame.image.tostring(img, "RGB"), None, None) ) print "Frame "+str(frame)+" process 2" # Convert to YUV, then codec da = bmpFrame.convert(vcodec.formats.PIX_FMT_YUV420P) print "Frame "+str(frame)+" process 2.5" d = enc.encode(da) #THIS IS WHERE IT STOPS print "Frame "+str(frame)+" process 3" fw.write(d.data) print "Frame "+str(frame)+" process 4" frame += 1 print "savng file" fw.close() Could somebody tell me why I have this error and possibly how to fix it? The files argument is a list of pygame images, outFile is a path, outCodec is default, and info1 is not used anymore. UPDATE 1 This is the code I used to make that list of pygame images. from PIL import ImageGrab import time, pygame pygame.init() f = [] #This is the list that contains the images fps = 1 for n in range(1, 100): info = ImageGrab.grab() size = info.size mode = info.mode data = info.tostring() info = pygame.image.fromstring(data, size, mode) f.append(info) time.sleep(fps)

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  • Unable to plot graph using matplotlib

    - by Aman Deep Gautam
    I have the following code which searches all the directory in the current directory and then takes data from those files to plot the graph. The data is read correctly as verified by printing but there are no points plotted on graph. import argparse import os import matplotlib.pyplot as plt #find the present working directory pwd=os.path.dirname(os.path.abspath(__file__)) #find all the folders in the present working directory. dirs = [f for f in os.listdir('.') if os.path.isdir(f)] plt.figure() plt.xlim(0, 20000) plt.ylim(0, 1) for directory in dirs: os.chdir(os.path.join(pwd, directory)); chd_dir = os.path.dirname(os.path.abspath(__file__)) files = [ fl for fl in os.listdir('.') if os.path.isfile(fl) ] print files for f in files: f_obj = open(os.path.join(chd_dir, f), 'r') list_x = [] list_y = [] for i in xrange(0,4): f_obj.next() for line in f_obj: temp_list = line.split() print temp_list list_y.append(temp_list[0]) list_x.append(temp_list[1]) print 'final_lsit' print list_x print list_y plt.plot(list_x, list_y, 'r.') f_obj.close() os.chdir(pwd) plt.savefig("test.jpg") The input files look like the following: 5 865 14709 15573 14709 1.32667e-06 664 0.815601 14719 1.55333e-06 674 0.813277 14729 1.82667e-06 684 0.810185 14739 1.4e-06 694 0.808459 Can anybody help me with why this is happening? Being new I would like to know some tutorial where I can get help with kind of plotting as the tutorial I was following made me end up here. Any help appreciated.

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