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  • set permissions to /bin/su

    - by JiminyCricket
    i need to change my /bin/su permissions back to the default, which is -rwsr-xr-x. 1 root root 42436 2009-09-08 04:52 /bin/su right now its -rwxr-xr-x. 1 root root 42436 2009-09-08 04:52 /bin/su how do I add the s in...? ive never seen that before

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  • Formatting with echo command

    - by johannix
    The actual situation is a bit complicated, but the issue I'm running into is that I have an echo command within an eval command. Like so: $ eval echo 'keep my spacing' keep my spacing $ echo 'keep my spacing' keep my spacing I was wondering how I could keep eval from stripping my spacing so that the first command prints out the same message as the second...

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  • Parsing Chunk of Data into Hash of Array With Perl

    - by neversaint
    I have data that looks like this: #info #info2 1:SRX004541 Submitter: UT-MGS, UT-MGS Study: Glossina morsitans transcript sequencing project(SRP000741) Sample: Glossina morsitans(SRS002835) Instrument: Illumina Genome Analyzer Total: 1 run, 8.3M spots, 299.9M bases Run #1: SRR016086, 8330172 spots, 299886192 bases 2:SRX004540 Submitter: UT-MGS Study: Anopheles stephensi transcript sequencing project(SRP000747) Sample: Anopheles stephensi(SRS002864) Instrument: Solexa 1G Genome Analyzer Total: 1 run, 8.4M spots, 401M bases Run #1: SRR017875, 8354743 spots, 401027664 bases 3:SRX002521 Submitter: UT-MGS Study: Massive transcriptional start site mapping of human cells under hypoxic conditions.(SRP000403) Sample: Human DLD-1 tissue culture cell line(SRS001843) Instrument: Solexa 1G Genome Analyzer Total: 6 runs, 27.1M spots, 977M bases Run #1: SRR013356, 4801519 spots, 172854684 bases Run #2: SRR013357, 3603355 spots, 129720780 bases Run #3: SRR013358, 3459692 spots, 124548912 bases Run #4: SRR013360, 5219342 spots, 187896312 bases Run #5: SRR013361, 5140152 spots, 185045472 bases Run #6: SRR013370, 4916054 spots, 176977944 bases What I want to do is to create a hash of array with first line of each chunk as keys and SR## part of lines with "^Run" as its array member: $VAR = { 'SRX004541' => ['SRR016086'], # etc } But why my construct doesn't work. And it must be a better way to do it. use Data::Dumper; my %bighash; my $head = ""; my @temp = (); while ( <> ) { chomp; next if (/^\#/); if ( /^\d{1,2}:(\w+)/ ) { print "$1\n"; $head = $1; } elsif (/^Run \#\d+: (\w+),.*/){ print "\t$1\n"; push @temp, $1; } elsif (/^$/) { push @{$bighash{$head}}, [@temp]; @temp =(); } } print Dumper \%bighash ;

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  • scp command with alert message

    - by muruga
    I want to get the alert message for every execution of the scp command. If some one access my file using the scp command, that time I have to receive one mail. How can I achieve this. Please help me.

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  • Double paging definition

    - by Albinoswordfish
    This is not a programming question but more of an operating system question Right now I'm trying to learn what exactly Double paging means. I see two different terms, double paging on disk and double paging in memory. Apparently this problem arises when we introduce a buffer cache to store disk blocks when doing File I/O But I'm not really sure what exactly this term means. If anybody could specify it would be very helpful.

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  • Condition Variable in Shared Memory - is this code POSIX-conformant?

    - by GrahamS
    We've been trying to use a mutex and condition variable to synchronise access to named shared memory on a LynuxWorks LynxOS-SE system (POSIX-conformant). One shared memory block is called "/sync" and contains the mutex and condition variable, the other is "/data" and contains the actual data we are syncing access to. We're seeing failures from pthread_cond_signal() if both processes don't perform the mmap() calls in exactly the same order, or if one process mmaps in some other piece of shared memory before it mmaps the sync memory. This example code is about as short as I can make it: #include <sys/types.h> #include <sys/stat.h> #include <sys/mman.h> #include <sys/file.h> #include <stdlib.h> #include <pthread.h> #include <errno.h> #include <iostream> #include <string> using namespace std; static const string shm_name_sync("/sync"); static const string shm_name_data("/data"); struct shared_memory_sync { pthread_mutex_t mutex; pthread_cond_t condition; }; struct shared_memory_data { int a; int b; }; //Create 2 shared memory objects // - sync contains 2 shared synchronisation objects (mutex and condition) // - data not important void create() { // Create and map 'sync' shared memory int fd_sync = shm_open(shm_name_sync.c_str(), O_CREAT|O_RDWR, S_IRUSR|S_IWUSR); ftruncate(fd_sync, sizeof(shared_memory_sync)); void* addr_sync = mmap(0, sizeof(shared_memory_sync), PROT_READ|PROT_WRITE, MAP_SHARED, fd_sync, 0); shared_memory_sync* p_sync = static_cast<shared_memory_sync*> (addr_sync); // init the cond and mutex pthread_condattr_t cond_attr; pthread_condattr_init(&cond_attr); pthread_condattr_setpshared(&cond_attr, PTHREAD_PROCESS_SHARED); pthread_cond_init(&(p_sync->condition), &cond_attr); pthread_condattr_destroy(&cond_attr); pthread_mutexattr_t m_attr; pthread_mutexattr_init(&m_attr); pthread_mutexattr_setpshared(&m_attr, PTHREAD_PROCESS_SHARED); pthread_mutex_init(&(p_sync->mutex), &m_attr); pthread_mutexattr_destroy(&m_attr); // Create the 'data' shared memory int fd_data = shm_open(shm_name_data.c_str(), O_CREAT|O_RDWR, S_IRUSR|S_IWUSR); ftruncate(fd_data, sizeof(shared_memory_data)); void* addr_data = mmap(0, sizeof(shared_memory_data), PROT_READ|PROT_WRITE, MAP_SHARED, fd_data, 0); shared_memory_data* p_data = static_cast<shared_memory_data*> (addr_data); // Run the second process while it sleeps here. sleep(10); int res = pthread_cond_signal(&(p_sync->condition)); assert(res==0); // <--- !!!THIS ASSERT WILL FAIL ON LYNXOS!!! munmap(addr_sync, sizeof(shared_memory_sync)); shm_unlink(shm_name_sync.c_str()); munmap(addr_data, sizeof(shared_memory_data)); shm_unlink(shm_name_data.c_str()); } //Open the same 2 shared memory objects but in reverse order // - data // - sync void open() { sleep(2); int fd_data = shm_open(shm_name_data.c_str(), O_RDWR, S_IRUSR|S_IWUSR); void* addr_data = mmap(0, sizeof(shared_memory_data), PROT_READ|PROT_WRITE, MAP_SHARED, fd_data, 0); shared_memory_data* p_data = static_cast<shared_memory_data*> (addr_data); int fd_sync = shm_open(shm_name_sync.c_str(), O_RDWR, S_IRUSR|S_IWUSR); void* addr_sync = mmap(0, sizeof(shared_memory_sync), PROT_READ|PROT_WRITE, MAP_SHARED, fd_sync, 0); shared_memory_sync* p_sync = static_cast<shared_memory_sync*> (addr_sync); // Wait on the condvar pthread_mutex_lock(&(p_sync->mutex)); pthread_cond_wait(&(p_sync->condition), &(p_sync->mutex)); pthread_mutex_unlock(&(p_sync->mutex)); munmap(addr_sync, sizeof(shared_memory_sync)); munmap(addr_data, sizeof(shared_memory_data)); } int main(int argc, char** argv) { if(argc>1) { open(); } else { create(); } return (0); } Run this program with no args, then another copy with args, and the first one will fail at the assert checking the pthread_cond_signal(). But change the open() function to mmap() the "/sync" memory first and it will all work fine. This seems like a major bug in LynxOS but LynuxWorks claim that using mutex and condition variable in this way is not covered by the POSIX standard, so they are not interested. Can anyone determine if this code does violate POSIX? Or does anyone have any convincing documentation that it is POSIX compliant?

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  • Bash scripting - Iterating through "variable" variable names for a list of associative arrays

    - by user1550254
    I've got a variable list of associative arrays that I want to iterate through and retrieve their key/value pairs. I iterate through a single associative array by listing all its keys and getting the values, ie. for key in "${!queue1[@]}" do echo "key : $key" echo "value : ${queue1[$key]}" done The tricky part is that the names of the associative arrays are variable variables, e.g. given count = 5, the associative arrays would be named queue1, queue2, queue3, queue4, queue5. I'm trying to replace the sequence above based on a count, but so far every combination of parentheses and eval has not yielded much more then bad substitution errors. e.g below: for count in {1,2,3,4,5} do for key in "${!queue${count}[@]}" do echo "key : $key" echo "value : ${queue${count}[$key]}" done done Help would be very much appreciated!

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  • comparing two files and merge the data

    - by Ganz Ricanz
    I have the below files, total.txt order1,5,item1 order2,6,item2 order3,7,item3 order4,6,item4 order8,9,item8 changed.txt order3,8,item3 order8,12,item8 total.txt is total order data and changed.txt is recently changed data. I want to merge the recent change with total, i want the output as , Output.txt order1,5,item1 order2,6,item2 order3,8,item3 order4,6,item4 order8,12,item8 Note : 2nd column of (3rd & 5th) row of the total.txt is updated with changed.txt file i have used the below nawk to compare the first coulmn, but not able to print it to the output file. Please help on complete the below command nawk -F"," 'NR==FNR {a[$1]=$2;next} ($1 in a) "print??"' total.txt changed.txt

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  • Unescpaing huge single-line string on Linux

    - by Lajos Nagy
    I ended up with a huge, single line string literal (don't ask me how) where everything is escaped (mostly), including new lines and double quotes. Problem is, I want the original string. The string is huge so I'm not even sure how to begin. Here's what I have: "This\n is \"nice\",\nain\'t it?" This is what I want: This is "nice", ain't it? Again, the problem is that other shell sensitive stuff is not escaped (like $, or !), and that the string is couple of megabytes.

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  • How to use FTP's APPEND command in a script?

    - by btelles
    Hi there, For some reason when I try to use "append" while inside an FTP script, the ftp client appears to hang. I've tried all sorts of different variations (for example, including the destination filee and not, using quotes and not), and all I ever get is a "No such file or directory" error (and I KNOW it's there) or it hangs on an 200 Request OK and never does anything. ftp> open ibm.some_server Connected to ibm.some_server 230 USER1 is logged on. Working directory is "USER1.". Remote system type is MVS. ftp> cd 'Z.TABS.' 250 "Z.TABS." is the working directory name prefix. ftp> append 'SAMASCPY' 'SAMASCPY': No such file or directory ftp> append SAMASCPY 200 Port request OK. Anyone know what could be going on?

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  • BASH: How to remove all files except those named in a manifest?

    - by brice
    I have a manifest file which is just a list of newline separated filenames. How can I remove all files that are not named in the manifest from a folder? I've tried to build a find ./ ! -name "filename" command dynamically: command="find ./ ! -name \"MANIFEST\" " for line in `cat MANIFEST`; do command=${command}"! -name \"${line}\" " done command=${command} -exec echo {} \; $command But the files remain. [Note:] I know this uses echo. I want to check what my command does before using it.

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  • unexpected result from gnu sort

    - by funkycat
    when I try to sort the following text file 'input': test1 3 test3 2 test 4 with the command sort input the output is exactly the input. Here is the output of od -bc input : 0000000 164 145 163 164 061 011 063 012 164 145 163 164 063 011 062 012 t e s t 1 \t 3 \n t e s t 3 \t 2 \n 0000020 164 145 163 164 011 064 012 t e s t \t 4 \n 0000027 It's just a tab separated file with two columns. When I do sort -k 2 The output changes to test3 2 test1 3 test 4 which is what I would expect. But if I do sort -k 1 nothing changes with respect to the input, whereas I would expect 'test' to sort before 'test1'. Finally, if I do cat input | cut -f 1 | sort I get test test1 test3 as expected. Is there a logical explanation for this? What exactly is sort supposed to do by default, something like: sort -k 1 ? My version of sort: sort (GNU coreutils) 7.4

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  • Select a particular column using awk or cut or perl

    - by javed abbas
    Have a requirement to select the 7th column. eg: cat filename | awk '{print $7}' The issue is that the data in the 4th column has multiple values with blank in between. example - The last line in the below output: user \Adminis FL_vol Design 0 - 1 - group 0 FL_vol Design 19324481 - 3014 - user \MAK FL_vol Design 16875161 - 2618 - tree 826 FL_vol Out Global Doc Mark 16875162 - 9618 - /vol/FL_vol/Out Global Doc Mark

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  • Bash Script using Grep to search for a pattern in a file

    - by atif089
    I am writing a bash script to search for a pattern in a file using GREP. I am clueless for why it isnt working. This is the program echo "Enter file name..."; read fname; echo "Enter the search pattern"; read pattern if [ -f $fname ]; then result=`grep -i '$pattern' $fname` echo $result; fi Or is there different approach to do this ? Thanks

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  • C socket programming: client send() but server select() doesn't see it

    - by Fantastic Fourier
    Hey all, I have a server and a client running on two different machines where the client send()s but the server doesn't seem to receive the message. The server employs select() to monitor sockets for any incoming connections/messages. I can see that when the server accepts a new connection, it updates the fd_set array but always returns 0 despite the client send() messages. The connection is TCP and the machines are separated by like one router so dropping packets are highly unlikely. I have a feeling that it's not select() but perhaps send()/sendto() from client that may be the problem but I'm not sure how to go about localizing the problem area. while(1) { readset = info->read_set; ready = select(info->max_fd+1, &readset, NULL, NULL, &timeout); } above is the server side code where the server has a thread that runs select() indefinitely. rv = connect(sockfd, (struct sockaddr *) &server_address, sizeof(server_address)); printf("rv = %i\n", rv); if (rv < 0) { printf("MAIN: ERROR connect() %i: %s\n", errno, strerror(errno)); exit(1); } else printf("connected\n"); sleep(3); char * somemsg = "is this working yet?\0"; rv = send(sockfd, somemsg, sizeof(somemsg), NULL); if (rv < 0) printf("MAIN: ERROR send() %i: %s\n", errno, strerror(errno)); printf("MAIN: rv is %i\n", rv); rv = sendto(sockfd, somemsg, sizeof(somemsg), NULL, &server_address, sizeof(server_address)); if (rv < 0) printf("MAIN: ERROR sendto() %i: %s\n", errno, strerror(errno)); printf("MAIN: rv is %i\n", rv); and this is the client side where it connects and sends messages and returns connected MAIN: rv is 4 MAIN: rv is 4 any comments or insightful insights are appreciated.

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  • How to print lines from a file that have repeated more than six times

    - by Mike
    I have a file containing the data shown below. The first comma-delimited field may be repeated any number of times, and I want to print only the lines after the sixth repetition of any value of this field For example, there are eight fields with 1111111 as the first field, and I want to print only the seventh and eighth of these records Input file: 1111111,aaaaaaaa,14 1111111,bbbbbbbb,14 1111111,cccccccc,14 1111111,dddddddd,14 1111111,eeeeeeee,14 1111111,ffffffff,14 1111111,gggggggg,14 1111111,hhhhhhhh,14 2222222,aaaaaaaa,14 2222222,bbbbbbbb,14 2222222,cccccccc,14 2222222,dddddddd,14 2222222,eeeeeeee,14 2222222,ffffffff,14 2222222,gggggggg,14 3333333,aaaaaaaa,14 3333333,bbbbbbbb,14 3333333,cccccccc,14 3333333,dddddddd,14 3333333,eeeeeeee,14 3333333,ffffffff,14 3333333,gggggggg,14 3333333,hhhhhhhh,14 Output: 1111111,gggggggg,14 1111111,hhhhhhhh,14 2222222,gggggggg,14 3333333,gggggggg,14 3333333,hhhhhhhh,14 What I have tried is to transponse the 2nd and 3rd fields with respect to 1st, so that I can use nawk on the field of $7 or $8 #!/usr/bin/ksh awk -F"," '{ a[$1]; b[$1]=b[$1]","$2 c[$1]=c[$1]","$3} END{ for(i in a){ print i","b[i]","c[i]} } ' file > output.txt

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  • undo continually vi

    - by wowrt
    Hi, I am using vi(not Vim) and I would like to continually undo the changes made. u works for a single command undo and Ufor a single line undo. But Is there a way to undo continuously like vim(I recall a command in vim can even undo changes by time!) in vi? Thanks in Advance.

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  • Use matching value of a RegExp to name the output file.

    - by fx42
    I have this file "file.txt" which I want to split into many smaller ones. Each line of the file has an id field which looks like "id:1" for a line belonging to id 1. For each id in the file, I like to create a file named idid.txt and put all lines that belong to this id in that file. My brute force bash script solution reads as follows. count=1 while [ $count -lt 19945 ] do cat file.txt | grep "id:$count " >> ./sets/id$count.txt count='expr $count + 1' done Now this is very inefficient as I have do read through the file about 20.000 times. Is there a way to do the same operation with only one pass through the file? - What I'm probably asking for is a way to use the value that matches for a regular expression to name the associated output file.

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  • Open an Emacs buffer when a command tries to open an editor in shell-mode

    - by Chris Conway
    I like to use Emacs' shell mode, but it has a few deficiencies. One of those is that it's not smart enough to open a new buffer when a shell command tries to invoke an editor. For example with the environment variable VISUAL set to vim I get the following from svn propedit: $ svn propedit svn:externals . "svn-prop.tmp" 2L, 149C[1;1H ~ [4;1H~ [5;1H~ [6;1H~ [7;1H~ ... (It may be hard to tell from the representation, but it's a horrible, ugly mess.) With VISUAL set to "emacs -nw", I get $ svn propedit svn:externals . emacs: Terminal type "dumb" is not powerful enough to run Emacs. It lacks the ability to position the cursor. If that is not the actual type of terminal you have, use the Bourne shell command `TERM=... export TERM' (C-shell: `setenv TERM ...') to specify the correct type. It may be necessary to do `unset TERMINFO' (C-shell: `unsetenv TERMINFO') as well.svn: system('emacs -nw svn-prop.tmp') returned 256 (It works with VISUAL set to just emacs, but only from inside an Emacs X window, not inside a terminal session.) Is there a way to get shell mode to do the right thing here and open up a new buffer on behalf of the command line process?

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