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• What would cause native gem extensions on OS X to build but fail to load?

  - by goodmike

  I am having trouble with some of my rubygems, in particular those that use native extensions. I am on a MacBookPro, with Snow Leopard. I have XCode 3.2.1 installed, with gcc 4.2.1. Ruby 1.8.6, because I'm lazy and a scaredy cat and don't want to upgrade yet. Ruby is running in 32-bit mode. I built this ruby from scratch when my MBP ran OSX 10.4. When I require one of the affected gems in irb, I get a Load Error for the gem extension's bundle file. For example, here's nokogigi dissing me: > require 'rubygems' = true > require 'nokogiri' LoadError: Failed to load /usr/local/lib/ruby/gems/1.8/gems/nokogiri-1.4.1/lib/nokogiri/nokogiri.bundle This is also happening with the Postgres pg and MongoDB mongo gems. My first thought was that the extensions must not be building right. But gem install wasn't throwing any errors. So I reinstalled with the verbose flag, hoping to see some helpful warnings. I've put the output in a Pastie, and the only warning I see is a consistent one about "passing argument n of ‘foo’ with different width due to prototype." I suspect that this might be an issue from upgrading to Snow Leopard, but I'm a little surprised to experience it now, since I've updated my XCode. Could it stem from running Ruby in 1.8.6? I'm embarrassed that I don't know quite enough about my Mac and OSX to know where to look next, so any guidance, even just a pointer to some document I couldn't find via Google, would be most welcome. Michael

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• Best pattern to load enumerated values from DAL using WCF RIA Services

  - by Dale Halliwell

  I would like to be able to load several RIA entitysets in a single call without chaining/nesting several small LoadOperations together so that they load sequentially. I have several pages that have a number of comboboxes on them. These comboboxes are populated with static values from a database (for example status values). Right now I preload these values in my VM by one method that strings together a series of LoadOperations for each type that I want to load. For example: public void LoadEnums() { context.Load(context.GetMyStatusValues1Query()).Completed += (s, e) => { this.StatusValues1 = context.StatusValues1; context.Load(context.GetMyStatusValues2()).Completed += (s1, e1) => { this.StatusValues2 = context.StatusValues2; context.Load(context.GetMyStatusValues3Query()).Completed += (s2, e2) => { this.StatusValues3 = context.StatusValues3; (....and so on) }; }; }; }; While this works fine, it seems a bit nasty. Also, I would like to know when the last loadoperation completes so that I can load whatever entity I want to work on after this, so that these enumerated values resolve properly in form elements like comboboxes and listboxes. (I think) I can't do this easily above without creating a delegate and calling that on the completion of the last loadoperation. So my question is: does anyone out there know a better pattern to use, ideally where I can load all my static entitysets in a single LoadOperation?

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• wopen calls when porting to Linux

  - by laura

  I have an application which was developed under Windows, but for gcc. The code is mostly OS-independent, with very few classes which are Windows specific because a Linux port was always regarded as necessary. The API, especially that which gets called as a direct result of user interaction, is using wide char arrays instead of char arrays (as a side note, I cannot change the API itself - at this point, std::wstring cannot be used). These are considered as encoded in UTF-16. In some places, the code opens files, mostly using the windows-specific _wopen function call. The problem with this is there is no wopen-like substitute for Linux because Linux "only deals with bytes". The question is: how do I port this code ? What if I wanted to open a file with the name "something™.log", how would I go about doing so in Linux ? Is a cast to char* sufficient, would the wide chars be picked up automatically based on the locale (probably not) ? Do I need to convert manually ? I'm a bit confused regarding this, perhaps someone could point me to some documentation regarding the matter.

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• How do I find the module dependencies of my Perl script?

  - by zoul

  I want another developer to run a Perl script I have written. The script uses many CPAN modules that have to be installed before the script can be run. Is it possible to make the script (or the perl binary) to dump a list of all the missing modules? Perl prints out the missing modules’ names when I attempt to run the script, but this is verbose and does not list all the missing modules at once. I’d like to do something like: $ cpan -i `said-script --list-deps` Or even: $ list-deps said-script > required-modules # on my machine $ cpan -i `cat required-modules` # on his machine Is there a simple way to do it? This is not a show stopper, but I would like to make the other developer’s life easier. (The required modules are sprinkled across several files, so that it’s not easy for me to make the list by hand without missing anything. I know about PAR, but it seems a bit too complicated for what I want.) Update: Thanks, Manni, that will do. I did not know about %INC, I only knew about @INC. I settled with something like this: print join("\n", map { s|/|::|g; s|\.pm$||; $_ } keys %INC); Which prints out: Moose::Meta::TypeConstraint::Registry Moose::Meta::Role::Application::ToClass Class::C3 List::Util Imager::Color … Looks like this will work.

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• Help passing reference to class subroutine in Perl.

  - by stephenmm

  I am trying to pass a routine to another subroutine within a Perl module. But when I pass the sub reference the passed in ref no longer has the object data. Maybe its not possible to do it this way. The line I have a question about is the "unless" lines below: sub get_flag_end { my $self = shift; return ( -e "$self->{file}" ); } sub wait_for_end { my $self = shift; my $timeout = shift; my $poll_interval = shift; # Is it even possible to pass the oject subroutine and retain the objects data? #unless ( $self->timeout( $timeout, $poll_interval, $self->get_flag_end ) ) { # does not work unless ( $self->timeout( $timeout, $poll_interval, \&get_flag_end ) ) { # call happens but members are empty die "!!!ERROR!!! Timed out while waiting for wait_for_end: timeout=$timeout, poll_interval=$poll_interval \n"; } } sub timeout { my $self = shift; my $timeout = shift; my $poll_interval = shift; my $test_condition = shift; until ($test_condition->() || $timeout <= 0) { $timeout -= $poll_interval; sleep $poll_interval; } return $timeout > 0; # condition was met before timeout } I know that I could change the "get_flag_end" routine to take the value as an argument to the subroutine but what if there was a bunch of stuff done in "get_flag_end" and I needed more members from the object. I simplified the code a bit to make it a little easier to follow.

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• parameter error in my Facebook app

  - by Robert

  I have written a small app and put it on facebook. I got an application ID and secret. Then I wrote the following script to access my app (just as told on the facebook page). <?php require './src/facebook.php'; $facebook = new Facebook(array( 'appId' => 'xxxx', 'secret' => 'xxxx', 'cookie' => true, // enable optional cookie support )); try { $me = $facebook->api('/me'); } catch (FacebookApiException $e) { error_log($e); } if ($facebook->getSession()) { echo '<a href="' . $facebook->getLogoutUrl() . '">Logout</a>'; } else { echo '<a href="' . $facebook->getLoginUrl() . '">Login</a>'; } ?> Then I started running this script. It prompted me with the login link, then took me to the facebook login page. However, after I enter my facebook login details, I get this error page: Error. API Error Code: 100 API Error Description: Invalid parameter Error Message: next is not owned by the application. Could anyone help me a little bit please, I am really confused here about what's going on.

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• Nusphere PHPEd: PHP Function Hints Lost Arguments?

  - by Eli

  Hi All, My PHPEd suddenly stopped showing arguments and arg order in the hints, and now just shows a basic description of the function. Before I go digging around in the config files, has anyone else had this problem? Thanks! Edit: Sorry, I may not have been entirely clear on this. There is no problem with my own classes, only with the actual php functions. Example: How it used to work: I type a PHP function, say strpos. As soon as I type the '(' at the end of it, I get the little yellow box, showing something like this: int strpos ( string $haystack , mixed $needle [, int $offset=0 ] ) with the first argument bold. If I type it, and then a comma, it bolds the second arg, and so on. This is really nice, since PHP functions are a bit scrambled as far as argument order, and I don't have to look them up every time. How it works now: I type a php function, say strpos. As soon as I type the '(' at the end of it, I get the little yellow box. It says something like "strpos - Returns the numeric position of the first occurrence of needle in the haystack string." There are no arguments shown, which makes the little box basically worthless - I know what strpos does, I just want a reminder of the argument order. I think this may be a problem with the included PHPDoc, which I never use, but may be the source of the data for the hint box. I did recently upgrade to 5.6, but ended up removing it and restoring 5.2. I installed to a different folder, and uninstalled from there, but it may have overwritten something in the original folder? I'm using v5.2 (5220). Thanks!

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• How is conversion of float/double to int handled in printf?

  - by Sandip

  Consider this program int main() { float f = 11.22; double d = 44.55; int i,j; i = f; //cast float to int j = d; //cast double to int printf("i = %d, j = %d, f = %d, d = %d", i,j,f,d); //This prints the following: // i = 11, j = 44, f = -536870912, d = 1076261027 return 0; } Can someone explain why the casting from double/float to int works correctly in the first case, and does not work when done in printf? This program was compiled on gcc-4.1.2 on 32-bit linux machine. EDIT: Zach's answer seems logical, i.e. use of format specifiers to figure out what to pop off the stack. However then consider this follow up question: int main() { char c = 'd'; // sizeof c is 1, however sizeof character literal // 'd' is equal to sizeof(int) in ANSI C printf("lit = %c, lit = %d , c = %c, c = %d", 'd', 'd', c, c); //this prints: lit = d, lit = 100 , c = d, c = 100 //how does printf here pop off the right number of bytes even when //the size represented by format specifiers doesn't actually match //the size of the passed arguments(char(1 byte) & char_literal(4 bytes)) return 0; } How does this work?

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• Generate a table of contents from HTML with Python

  - by Oli

  I'm trying to generate a table of contents from a block of HTML (not a complete file - just content) based on its <h2> and <h3> tags. My plan so far was to: Extract a list of headers using beautifulsoup Use a regex on the content to place anchor links before/inside the header tags (so the user can click on the table of contents) -- There might be a method for replacing inside beautifulsoup? Output a nested list of links to the headers in a predefined spot. It sounds easy when I say it like that, but it's proving to be a bit of a pain in the rear. Is there something out there that does all this for me in one go so I don't waste the next couple of hours reinventing the wheel? A example: <p>This is an introduction</p> <h2>This is a sub-header</h2> <p>...</p> <h3>This is a sub-sub-header</h3> <p>...</p> <h2>This is a sub-header</h2> <p>...</p>

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• How to force the build to be out of date, when a text file is modified?

  - by demoncodemonkey

  The Scenario My project has a post-build phase set up to run a batch file, which reads a text file "version.txt". The batch file uses the information in version.txt to inject the DLL with a version block using this tool. The version.txt is included in my project to make it easy to modify. It looks a bit like this: @set #Description="TankFace Utility Library" @set #FileVersion="0.1.2.0" @set #Comments="" Basically the batch file renames this file to version.bat, calls it, then renames it back to version.txt afterwards. The Problem When I modify version.txt (e.g. to increment the file version), and then press F7, the build is not seen as out-of-date, so the post-build step is not executed, so the DLL's version doesn't get updated. I really want to include the .txt file as an input to the build, but without anything actually trying to use it. If I #include the .txt file from a CPP file in the project, the compiler fails because it obviously doesn't understand what "@set" means. If I add /* ... */ comments around the @set commands, then the batch file has some syntax errors but eventually succeeds. But this is a poor solution I think. So... how would you do it?

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• UPDATE query that fixes orphaned records

  - by Jed

  I have an Access database that has two tables that are related by PK/FK. Unfortunately, the database tables have allowed for duplicate/redundant records and has made the database a bit screwy. I am trying to figure out a SQL statement that will fix the problem. To better explain the problem and goal, I have created example tables to use as reference: You'll notice there are two tables, a Student table and a TestScore table where StudentID is the PK/FK. The Student table contains duplicate records for students John, Sally, Tommy, and Suzy. In other words the John's with StudentID's 1 and 5 are the same person, Sally 2 and 6 are the same person, and so on. The TestScore table relates test scores with a student. Ignoring how/why the Student table allowed duplicates, etc - The goal I'm trying to accomplish is to update the TestScore table so that it replaces the StudentID's that have been disabled with the corresponding enabled StudentID. So, all StudentID's = 1 (John) will be updated to 5; all StudentID's = 2 (Sally) will be updated to 6, and so on. Here's the resultant TestScore table that I'm shooting for (Notice there is no longer any reference to the disabled StudentID's 1-4): Can you think of a query (compatible with MS Access's JET Engine) that can accomplish this goal? Or, maybe, you can offer some tips/perspectives that will point me in the right direction. Thanks.

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• How to gray out HTML form inputs?

  - by typoknig

  What is the best way to gray out text inputs on an HTML form? I need the inputs to be grayed out when a user checks a check box. Do I have to use JavaScript for this (not very familiar with JScript) or can I use PHP (which I am more familiar with)? EDIT: After some reading I have got a little bit of code, but it is giving me problems. For some reason I cannot get my script to work based on the state of the form input (enabled or disabled) or the state of my checkbox (checked or unchecked), but my script works fine when I base it on the values of the form inputs. I have written my code exactly like several examples online (mainly this one) but to no avail. None of the stuff that is commented out will work. What am I doing wrong here? <label>Mailing address same as residental address</label> <input name="checkbox" onclick="disable_enable() "type="checkbox" style="width:15px"/><br/><br/> <script type="text/javascript"> function disable_enable(){ if (document.form.mail_street_address.value==1) document.form.mail_street_address.value=0; //document.form.mail_street_address.disabled=true; //document.form.mail_city.disabled=true; //document.form.mail_state.disabled=true; //document.form.mail_zip.disabled=true; else document.form.mail_street_address.value=1; //document.form.mail_street.disabled=false; //document.form.mail_city.disabled=false; //document.form.mail_state.disabled=false; //document.form.mail_zip.disabled=false; } </script>

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• Template problems: No matching function for call

  - by Nick Sweet

  I'm trying to create a template class, and when I define a non-member template function, I get the "No matching function for call to randvec()" error. I have a template class defined as: template <class T> class Vector { T x, y, z; public: //constructors Vector(); Vector(const T& x, const T& y, const T& z); Vector(const Vector& u); //accessors T getx() const; T gety() const; T getz() const; //mutators void setx(const T& x); void sety(const T& y); void setz(const T& z); //operations void operator-(); Vector plus(const Vector& v); Vector minus(const Vector& v); Vector cross(const Vector& v); T dot(const Vector& v); void times(const T& s); T length() const; //Vector<T>& randvec(); //operators Vector& operator=(const Vector& rhs); friend std::ostream& operator<< <T>(std::ostream&, const Vector<T>&); }; and the function in question, which I've defined after all those functions above, is: //random Vector template <class T> Vector<double>& randvec() { const int min=-10, max=10; Vector<double>* r = new Vector<double>; int randx, randy, randz, temp; const int bucket_size = RAND_MAX/(max-min +1); temp = rand(); //voodoo hackery do randx = (rand()/bucket_size)+min; while (randx < min || randx > max); r->setx(randx); do randy = (rand()/bucket_size)+min; while (randy < min || randy > max); r->sety(randy); do randz = (rand()/bucket_size)+min; while (randz < min || randz > max); r->setz(randz); return *r; } Yet, every time I call it in my main function using a line like: Vector<double> a(randvec()); I get that error. However, if I remove the template and define it using 'double' instead of 'T', the call to randvec() works perfectly. Why doesn't it recognize randvec()? P.S. Don't mind the bit labeled voodoo hackery - this is just a cheap hack so that I can get around another problem I encountered.

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• Unexpected performance curve from CPython merge sort

  - by vkazanov

  I have implemented a naive merge sorting algorithm in Python. Algorithm and test code is below: import time import random import matplotlib.pyplot as plt import math from collections import deque def sort(unsorted): if len(unsorted) <= 1: return unsorted to_merge = deque(deque([elem]) for elem in unsorted) while len(to_merge) > 1: left = to_merge.popleft() right = to_merge.popleft() to_merge.append(merge(left, right)) return to_merge.pop() def merge(left, right): result = deque() while left or right: if left and right: elem = left.popleft() if left[0] > right[0] else right.popleft() elif not left and right: elem = right.popleft() elif not right and left: elem = left.popleft() result.append(elem) return result LOOP_COUNT = 100 START_N = 1 END_N = 1000 def test(fun, test_data): start = time.clock() for _ in xrange(LOOP_COUNT): fun(test_data) return time.clock() - start def run_test(): timings, elem_nums = [], [] test_data = random.sample(xrange(100000), END_N) for i in xrange(START_N, END_N): loop_test_data = test_data[:i] elapsed = test(sort, loop_test_data) timings.append(elapsed) elem_nums.append(len(loop_test_data)) print "%f s --- %d elems" % (elapsed, len(loop_test_data)) plt.plot(elem_nums, timings) plt.show() run_test() As much as I can see everything is OK and I should get a nice N*logN curve as a result. But the picture differs a bit: Things I've tried to investigate the issue: PyPy. The curve is ok. Disabled the GC using the gc module. Wrong guess. Debug output showed that it doesn't even run until the end of the test. Memory profiling using meliae - nothing special or suspicious. ` I had another implementation (a recursive one using the same merge function), it acts the similar way. The more full test cycles I create - the more "jumps" there are in the curve. So how can this behaviour be explained and - hopefully - fixed? UPD: changed lists to collections.deque UPD2: added the full test code UPD3: I use Python 2.7.1 on a Ubuntu 11.04 OS, using a quad-core 2Hz notebook. I tried to turn of most of all other processes: the number of spikes went down but at least one of them was still there.

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• Are there scenarios where the ViewModel needs to invoke methods on the View w.r.t. MVVM in WPF?

  - by Gishu

  As per the pattern, the ViewModel exposes Properties(with change notification) and Commands (to notify the VM of user actions) that the View binds to. The only communication that flows from the VM to the View is the property change notifications (so that the View can refresh itself with updated data). In MVP or PresentationModel form of the pattern (if I'm not mistaken), the View implements a plain vanilla interface (consisting of methods, properties and/or events). With MVVM, it feels methods on the IView have been outlawed (along with IView itself). One scenario I could think of was to set the focus to a certain control in the View. (When the user does ActionX, the focus should immediately be set to FieldY). In MVP, I'd write this as IView.ActivateField(NameConstant), which the presenter or PM would invoke. In MVVM, this seems to be a fringe case that needs a workaround / little bit of code-behind. The VM implements an ActiveField Property, which it sets to NameConstant. The view picks up the change notification event and in a code-behind event handler, activates the Name control. Is the above just an exception to the norm? Or are there other such scenarios, where the VM needs to invoke a method on the View ?

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• Use the output of logs in the execution of a program

  - by myle

  When I try to create a specific object, the program crashes. However, I use a module (mechanize) which logs useful information just before the crash. If I had somehow this information available I could avoid it. Is there any way to use the information which is logged (when I use the function set_debug_redirects) during the normal execution of the program? Just to be a bit more specific, I try to emulate the login behavior in a webpage. The program crashes because it can't handle a specific Following HTTP-EQUIV=REFRESH to <omitted_url>. Given this url, which is available in the logs but not as part of the exception which is thrown, I could visit this page and complete successfully the login process. Any other suggestions that may solve the problem are welcomed. It follows the code so far. SERVICE_LOGIN_BOX_URL = "https://www.google.com/accounts/ServiceLoginBox?service=adsense&ltmpl=login&ifr=true&rm=hide&fpui=3&nui=15&alwf=true&passive=true&continue=https%3A%2F%2Fwww.google.com%2Fadsense%2Flogin-box-gaiaauth&followup=https%3A%2F%2Fwww.google.com%2Fadsense%2Flogin-box-gaiaauth&hl=en_US" def init_browser(): # Browser br = mechanize.Browser() # Cookie Jar cj = cookielib.LWPCookieJar() br.set_cookiejar(cj) # Browser options br.set_handle_equiv(True) br.set_handle_gzip(False) br.set_handle_redirect(True) br.set_handle_referer(True) br.set_handle_robots(True) br.set_handle_refresh(mechanize._http.HTTPRefreshProcessor(), max_time=30.0, honor_time=False) # Want debugging messages? #br.set_debug_http(True) br.set_debug_redirects(True) #br.set_debug_responses(True) return br def adsense_login(login, password): br = init_browser() r = br.open(SERVICE_LOGIN_BOX_URL) html = r.read() # Select the first (index zero) form br.select_form(nr=0) br.form['Email'] = login br.form['Passwd'] = password br.submit() req = br.click_link(text='click here to continue') try: # this is where it crashes br.open(req) except HTTPError, e: sys.exit("post failed: %d: %s" % (e.code, e.msg)) return br

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• Zend Framework or CakePHP?

  - by gorzan

  My group is going to attempt to build a new CMS from scratch, designed to serve the needs of our organization. It should be noted that none of us have any formal programming education, but we've picked up this and that from developing different websites, among others the one our community uses now. We've decided to program the new CMS in PHP, with total MVC seperation. Not wanting to re-invent all the little cogs and wheels needed for such a potentially large project as this, we've been looking into using a PHP framework, and some googling and blog-surfing landed us in a discussion: Zend vs Cake? Anyone have any useful input here? Also, any other tips for embarking on this project would be appreciated. (Except for suggestions for existing CMSes, we know they're out there.) EDIT: It seems I was a bit unclear. None of us are NEW to PHP - in fact, we all have fairly extensive experience from previous projects, including the current solution our community's website runs on which we built ourselves. The decision to not use an existing CMS is a very informed one, so although I appreciate all the good suggestions we really are going to do this ourselves. So. Zend vs Cake?

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• Is Perl's flip-flop operator bugged? It has global state, how can I reset it?

  - by Evan Carroll

  I'm dismayed. Ok, so this was probably the most fun perl bug I've ever found. Even today I'm learning new stuff about perl. Essentially, the flip-flop operator .. which returns false until the left-hand-side returns true, and then true until the right-hand-side returns false keep global state (or that is what I assume.) My question is can I reset it, (perhaps this would be a good addition to perl4-esque hardly ever used reset())? Or, is there no way to use this operator safely? I also don't see this (the global context bit) documented anywhere in perldoc perlop is this a mistake? Code use feature ':5.10'; use strict; use warnings; sub search { my $arr = shift; grep { !( /start/ .. /never_exist/ ) } @$arr; } my @foo = qw/foo bar start baz end quz quz/; my @bar = qw/foo bar start baz end quz quz/; say 'first shot - foo'; say for search \@foo; say 'second shot - bar'; say for search \@bar; Spoiler $ perl test.pl first shot foo bar second shot

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• How to minify JS in PHP easily...Or something else

  - by RickyAYoder

  I've done some looking around, but I'm still confused a bit. I tried Crockford's JSMin, but Win XP can't unzip the executable file for some reason. What I really want though is a simple and easy-to-use JS minifier that uses PHP to minify JS code--and return the result. The reason why is because: I have 2 files (for example) that I'm working between: scripts.js and scripts_template.js scripts_template is normal code that I write out--then I have to minify it and paste the minified script into scripts.js--the one that I actually USE on my website. I want to eradicate the middle man by simply doing something like this on my page: <script type="text/javascript" src="scripts.php"></script> And then for the contents of scripts.php: <?php include("include.inc"); header("Content-type:text/javascript"); echo(minify_js(file_get_contents("scripts_template.js"))); This way, whenever I update my JS, I don't have to constantly go to a website to minify it and re-paste it into scripts.js--everything is automatically updated. Yes, I have also tried Crockford's PHP Minifier and I've taken a look at PHP Speedy, but I don't understand PHP classes just yet...Is there anything out there that a monkey could understand, maybe something with RegExp? How about we make this even simpler? I just want to remove tab spaces--I still want my code to be readable. It's not like the script makes my site lag epically, it's just anything is better than nothing. Tab removal, anyone? And if possible, how about removing completely BLANK lines?

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• Sql Serve - Cascade delete has multiple paths

  - by Anders Juul

  Hi all, I have two tables, Results and ComparedResults. ComparedResults has two columns which reference the primary key of the Results table. My problem is that if a record in Results is deleted, I wish to delete all records in ComparedResults which reference the deleted record, regardless of whether it's one column or the other (and the columns may reference the same Results row). A row in Results may deleted directly or through cascade delete caused by deleting in a third table. Googling this could indicate that I need to disable cascade delete and rewrite all cascade deletes to use triggers instead. Is that REALLY nessesary? I'd be prepared to do much restructuring of the database to avoid this, as my main area is OO programming, and databases should 'just work'. It is hard to see, however, how a restructuring could help as I would just move the problem around... Or am I missing something? I am also a bit at a loss as to why my initial construct should even be a problem for the Sql Server?! Any comments welcome and much appreciated! Anders, Denmark

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• Efficient splitting of elements in a field

  - by Gary

  I have a field in a text file exported from a database. The field contains addresses but sometimes they are quite long and the database allows them to contain multiple lines. When exported, the newline character gets replaced with a dollar sign like this: first part of very long address$second part of very long address$third part of very long address Not every address has multiple lines and no address contains more than three lines. The length of each line is variable. I'm massaging the data for import into MS Access which is used for a mailmerge. I want to split the field on the $ sign if it's there but if the field only contains 1 line, I want to set my two extra output fields to a zero length string so that I don't wind up with blank lines in the address when it gets printed. I have an awk file that's working correctly on all the other data in the textfile but I need to get this last bit working. I tried the below code. Aside from the fact that I get a syntax error at the else, I'm not sure this is a good way to do what I want. This is being done with gawk on Windows. BEGIN { FS = "|" } $1 != "HEADER" { if ($6 ~ /\$/) split($6, arr, "$") address = arr[1] addresstwo = arr[2] addressthree = arr[3] addressLength = length(address) addressTwoLength = length(addresstwo) addressThreeLength = length(addressthree) else { address = $6 addressLength = length($6) addresstwo = "" addressTwoLength = length(addresstwo) addressthree = "" addressThreeLength = length(addressthree) } printf("%*s\t%*s\t\%*s\n", addressLength, address, addressTwoLength, addresstwo, addressThreeLength, addressthree) }

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• Webstart omits cookie, resulting in EOFException in ObjectInputStream when accessing Servlets?!

  - by Houtman

  Hi, My app. is started from both the commandline and by using an JNLP file. Im running java version 1.6.0_14 First i had the problem that i created the Buffered input and output streams in incorrect order. Found the solution here at StackOverflow . So starting from the commandline works fine now. But when starting the app using Webstart, it ends here java.io.EOFException at java.io.ObjectInputStream$PeekInputStream.readFully(Unknown Source) at java.io.ObjectInputStream$BlockDataInputStream.readShort(Unknown Source) at java.io.ObjectInputStream.readStreamHeader(Unknown Source) at java.io.ObjectInputStream.<init>(Unknown Source) at <..>remoting.thinclient.RemoteSocketChannel.<init>(RemoteSocketChannel.java:76) I found some posts regarding similar problems; at ibm.com - identifies cookies problem at bugs.sun.com - identifies problem as solved in 6u10(b12)? The first suggests that there is a problem in Webstart with cookies. It doesn't seem to be acknowledged as a proper java bug though.. Still i am a bit lost in the solution provided regarding the cookies.(ibm link) Can anyone expand on the cookie solution? I can't find information on how the cookie is generated in the first place. Many thanks.

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• rpy2: Converting a data.frame to a numpy array

  - by Mike Dewar

  I have a data.frame in R. It contains a lot of data : gene expression levels from many (125) arrays. I'd like the data in Python, due mostly to my incompetence in R and the fact that this was supposed to be a 30 minute job. I would like the following code to work. To understand this code, know that the variable path contains the full path to my data set which, when loaded, gives me a variable called immgen. Know that immgen is an object (a Bioconductor ExpressionSet object) and that exprs(immgen) returns a data frame with 125 columns (experiments) and tens of thousands of rows (named genes). robjects.r("load('%s')"%path) # loads immgen e = robjects.r['data.frame']("exprs(immgen)") expression_data = np.array(e) This code runs, but expression_data is simply array([[1]]). I'm pretty sure that e doesn't represent the data frame generated by exprs() due to things like: In [40]: e._get_ncol() Out[40]: 1 In [41]: e._get_nrow() Out[41]: 1 But then again who knows? Even if e did represent my data.frame, that it doesn't convert straight to an array would be fair enough - a data frame has more in it than an array (rownames and colnames) and so maybe life shouldn't be this easy. However I still can't work out how to perform the conversion. The documentation is a bit too terse for me, though my limited understanding of the headings in the docs implies that this should be possible. Anyone any thoughts?

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• Python: Memory usage and optimization when modifying lists

  - by xApple

  The problem My concern is the following: I am storing a relativity large dataset in a classical python list and in order to process the data I must iterate over the list several times, perform some operations on the elements, and often pop an item out of the list. It seems that deleting one item out of a Python list costs O(N) since Python has to copy all the items above the element at hand down one place. Furthermore, since the number of items to delete is approximately proportional to the number of elements in the list this results in an O(N^2) algorithm. I am hoping to find a solution that is cost effective (time and memory-wise). I have studied what I could find on the internet and have summarized my different options below. Which one is the best candidate ? Keeping a local index: while processingdata: index = 0 while index < len(somelist): item = somelist[index] dosomestuff(item) if somecondition(item): del somelist[index] else: index += 1 This is the original solution I came up with. Not only is this not very elegant, but I am hoping there is better way to do it that remains time and memory efficient. Walking the list backwards: while processingdata: for i in xrange(len(somelist) - 1, -1, -1): dosomestuff(item) if somecondition(somelist, i): somelist.pop(i) This avoids incrementing an index variable but ultimately has the same cost as the original version. It also breaks the logic of dosomestuff(item) that wishes to process them in the same order as they appear in the original list. Making a new list: while processingdata: for i, item in enumerate(somelist): dosomestuff(item) newlist = [] for item in somelist: if somecondition(item): newlist.append(item) somelist = newlist gc.collect() This is a very naive strategy for eliminating elements from a list and requires lots of memory since an almost full copy of the list must be made. Using list comprehensions: while processingdata: for i, item in enumerate(somelist): dosomestuff(item) somelist[:] = [x for x in somelist if somecondition(x)] This is very elegant but under-the-cover it walks the whole list one more time and must copy most of the elements in it. My intuition is that this operation probably costs more than the original del statement at least memory wise. Keep in mind that somelist can be huge and that any solution that will iterate through it only once per run will probably always win. Using the filter function: while processingdata: for i, item in enumerate(somelist): dosomestuff(item) somelist = filter(lambda x: not subtle_condition(x), somelist) This also creates a new list occupying lots of RAM. Using the itertools' filter function: from itertools import ifilterfalse while processingdata: for item in itertools.ifilterfalse(somecondtion, somelist): dosomestuff(item) This version of the filter call does not create a new list but will not call dosomestuff on every item breaking the logic of the algorithm. I am including this example only for the purpose of creating an exhaustive list. Moving items up the list while walking while processingdata: index = 0 for item in somelist: dosomestuff(item) if not somecondition(item): somelist[index] = item index += 1 del somelist[index:] This is a subtle method that seems cost effective. I think it will move each item (or the pointer to each item ?) exactly once resulting in an O(N) algorithm. Finally, I hope Python will be intelligent enough to resize the list at the end without allocating memory for a new copy of the list. Not sure though. Abandoning Python lists: class Doubly_Linked_List: def __init__(self): self.first = None self.last = None self.n = 0 def __len__(self): return self.n def __iter__(self): return DLLIter(self) def iterator(self): return self.__iter__() def append(self, x): x = DLLElement(x) x.next = None if self.last is None: x.prev = None self.last = x self.first = x self.n = 1 else: x.prev = self.last x.prev.next = x self.last = x self.n += 1 class DLLElement: def __init__(self, x): self.next = None self.data = x self.prev = None class DLLIter: etc... This type of object resembles a python list in a limited way. However, deletion of an element is guaranteed O(1). I would not like to go here since this would require massive amounts of code refactoring almost everywhere.

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• pie chart (php graph lib) problem !

  - by gin

  i'm using phpgraphlib for creating charts i tried one of the example of the pie charts ex (with lil bit pf changes) which is : include('phpgraphlib.php'); include('phpgraphlib_pie.php'); $graph = new PHPGraphLibPie(400, 200); $data = array("CBS" = 0, "NBC" = 1); $graph-addData($data); $graph-setTitle('8/29/07 Top 5 TV Networks Market Share'); $graph-setLabelTextColor('50,50,50'); $graph-setLegendTextColor('50,50,50'); $graph-createGraph(); ? and whether i put $data = array("CBS" = 0, "NBC" = 1); or $data = array("CBS" = 1, "NBC" = 0); the pie chart have the same color.. shouldn't the whole pie/slice suppose to be colored with some color (i.e. blue) if ("CBS" = 0, "NBC" = 1) , while if ("CBS" = 1, "NBC" = 0) it should be colored with other color (i.e. red)/? is there any way to fix it? i would really appreciate any help ,,

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