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  • Sequential numbering from recursive function? e.g. 2, 2.1, 2.1.1, 2.2, 2.2.1

    - by Pete
    I have a recursive function reading a "table of contents" of documents from a database. I would like to print numbering with the document that reflects where the item is in the tree, e.g. First item, 1.1 Child of first item, 1.1.1 Child of child of first item, 1.2 Child of first item, Second item, 2.1 Child of second item, etc. Rather stumped about this at the moment - help please?

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • java tracing spaghetti code

    - by Amarsh
    Folks, I have just joined this company which has a huge source tree based upon JSP/Servlet and EJB 1.2. No documentation exists. The code has been written over seven years, with a large number of undocumented changes. Are there any tool tah can assist me in tracing the execution? Putting a breakpoint is not helping me much.

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  • Skip Lists -- ever used them?

    - by Head Geek
    I'm wondering whether anyone here has ever used a skip list. It looks to have roughly the same advantages as a balanced binary tree, but is simpler to implement. If you have, did you write your own, or use a pre-written library (and if so, what was its name)?

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  • Java: what is the class for the isBinary-method?

    - by HH
    I am accustomed to java.io.* and java.util.* but not to the tree: com.starbase.util Class FileUtils java.lang.Object | +--com.starbase.util.FileUtils Source. So which class should I import to use the isBinary-method? Do I do "import java.lang.Object;" or "import java.lang.Object.com.starbase.util.FileUtils;"?

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  • need a project design tool

    - by santosh
    I am looking for simple and easy to use tools through which I can get project's visual picture of folder/file tree stucture , its classes, functions and objects, relations between classes and files.

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  • Catch all DOM events on a page (without Firebug et. al.)

    - by Morten Bergfall
    How would I go about creating a cross-browser script, that would intercept all events firing on a page/browser window/DOM-tree (regardless of browser)? What I'm hoping to accomplish is basically to get a better understanding of the different handling of events in different browsers; I know the basic theory, but need to see to believe...

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  • What is the best approach to use different CFLAGS for the same source files?

    - by evilsocket
    Hello, i need to build the same source tree twice, 1 - with normal cflags to build the project binary 2 - with cflags plus -fPIC to build a static library that would be some sort of SDK to develop project dynamic modules. Using only one Makefile, what is the best approach to accomplish this? It would be nice to do some sort of : all: $(OBJECTS) lib_rule: $(OBJECTS) CFLAGS += -fPIC .cpp.o: $(CC) -c $< -o $@ $(CFLAGS) But obviously it can't be done. Thanks

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  • Drupal using Solr externally on another machine?

    - by Meg
    I'd like to use the Drupal solr search module with the Apache Solr Search hosted on an external machine. I know that Acquia offer this as a service. But it's not an affordable option for me. I'd like to install Solr on an inexpensive VPS and have all my various Drupal sites which are on different hosts accessing the search functions. Am I barking up the wrong tree?

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  • cmake and parallel building with "make -jN"

    - by Roman D
    Hi all, I'm trying to setup a parallel CMake-based build for my source tree, but when I issue $ cmake . $ make -j2 I get a jobserver unavailable: using -j1. Add '+' to parent make rule warning. Does anyone have an idea if it is possible to fix it somehow?

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  • Java IDE - find all INDIRECT usages/references of a function or class?

    - by GreenieMeanie
    In Netbeans or in Eclipse, you can use "Find Usages" or "References" from the right click context menu. If a() calls b(), using the functionality from b() will show you a(). However, what I want is to be able to see some kind of tree or have an option to see all usages of a given/class or method, such that if z() calls a() that using the functionality will show both z() and a(). Any IDE plugins or external tools that can do this?

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  • COM library for Explorer-like system views

    - by chrisd
    To provide a Windows Explorer-like view of the user's system, we have been using the shell controls from LogicNP (formerly Sky Software), but these have deficiencies, e.g., no support for Win7 libraries. The vendor has not responded to our inquiries about updates, so we're looking to replace the package. Requirements: ActiveX (no managed code or MFC) Tree and list views of the system Per-item checkboxes 32- and 64-bit versions Any recommendations for a replacement product? TIA.

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  • using 3rd party dll in enterprise web based application?

    - by mazhar
    I found a great control with example here for mvc It fulfills all my requirement but the problem is that it uses a js tree dll. Should I go on and used that example in my application? Do you people refrain from using 3rd party free dll in applications? How will I tell that it will not expire or not cause problem later on Forgive me if this is inappropriate question but thx in advance for any appropiate reply on this topic. just trying to get the point of view of you people on this

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  • How can I show the contents of a file at a specific state of a git repo?

    - by richcollins
    I want to show the contents of a file given by a path at a specific state of a git repo. I unsuccessfully tried this: git show f825334150cd4bc8f46656b2daa8fa1e92f7796d:Katana/source/Git/GitLocalBranch.h fatal: ambiguous argument 'f825334150cd4bc8f46656b2daa8fa1e92f7796d:Katana/source/Git/GitLocalBranch.h': unknown revision or path not in the working tree. Use '--' to separate paths from revisions The commit in question didn't modify the file specified. How can I show the contents of a file at a given state (specified by a commit hash) regardless of the involvement of the file in the commit?

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  • How to write an RDF Schema?

    - by trickdev
    I am trying to get my head around using RDF to describe custom resources. I understand there are xmlns' out there such as Dublin Core and foaf which provide predefined element sets. How do I go about creating my own? I may be barking up the wrong tree of course and should stick to xml + xsd?

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