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  • Python structure mistake

    - by jaddy123
    I'm writing a program in which I can Reverse the sequence and Replace all As with Ts, all Cs with Gs, all Gs with Cs, and all Ts with As. the program is to read a sequence of bases and output the reverse complement sequence. I am having trouble to do it so can anyone please help me with this by having a look on my code: word = raw_input("Enter sequence: ") a = word.replace('A', 'T') b = word.replace('C', 'G') c = word.replace('G', 'C') d = word.replace('T', 'A') if a == word and b == word and c == word and d == word: print "Reverse complement sequence: ", word And I want this sort of output: Enter sequence: CGGTGATGCAAGG Reverse complement sequence: CCTTGCATCACCG Regards

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  • Python sort strings started with digits

    - by vlad
    I have the next list: a = ['1th Word', 'Another Word', '10th Word'] print a.sort() >>> ['10th Word', '1th Word', 'Another Word'] But I need: ['1th Word', '10th Word','Another Word'] Is there an easy way to do this? I tried: r = re.compile(r'(\d+)') def sort_by_number(s): m = r.match(s) return m.group(0) x.sort(key=sort_by_number) But some strings do not have numbers and this leads to an errors. Thanks.

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  • Python - Removing duplicates from a string

    - by Daniel
    def remove_duplicates(strng): """ Returns a string which is the same as the argument except only the first occurrence of each letter is present. Upper and lower case letters are treated as different. Only duplicate letters are removed, other characters such as spaces or numbers are not changed. >>> remove_duplicates('apple') 'aple' >>> remove_duplicates('Mississippi') 'Misp' >>> remove_duplicates('The quick brown fox jumps over the lazy dog') 'The quick brown fx jmps v t lazy dg' >>> remove_duplicates('121 balloons 2 u') '121 balons 2 u' """ s = strng.split() return strng.replace(s[0],"") Writing a function to get rid of duplicate letters but so far have been playing around for an hour and can't get anything. Help would be appreciated, thanks.

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  • Python get raw_input but manually decide when string is done

    - by Jasie
    I want someone to type words in the console, and autocomplete from a list when they hit "tab" key. However, raw_input won't return a string until someone hits [Enter]. How do I read characters into a variable until the user hits [Enter]? *Note: I don't want to use import readline for autocompletion because of OS issues.

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  • python win32api registery key change

    - by user340495
    Hi, I am trying to trigger an event every time a registry value is being modified. import win32api import win32event import win32con import _winreg key = _winreg.OpenKey(_winreg.HKEY_CURRENT_USER,'Control Panel\Desktop',0,_winreg.KEY_READ) sub_key = _winreg.CreateKey(key,'Wallpaper') evt = win32event.CreateEvent(None,0,0,None) win32api.RegNotifyChangeKeyValue(sub_key,1,win32api.REG_NOTIFY_CHANGE_ATTRIBUTES,evt,True) ret_code=win32event.WaitForSingleObject(evt,3000) if ret_code == win32con.WAIT_OBJECT_0: print "CHANGED" if ret_code == win32con.WAIT_TIMEOUT: print "TIMED" my problem is that this is never triggered , the event always time-out. (the reg key I am trying to follow is the wallpaper) [ please note I trigger the event by 1) manually changing the registry value in regedit 2) an automated script which run this : from ctypes import windll from win32con import * windll.user32.SystemParametersInfoA(SPI_SETDESKWALLPAPER, 0,"C:\wall.jpg",SPIF_UPDATEINIFILE | SPIF_SENDWININICHANGE) ] Thanks for any help in advance :) EDIT:: sorry about formatting

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  • Stock Symbols using python

    - by nimmyliji
    Hi all, Hi, I am looking for some stock symbol look-up API. I could able to query yahoo finance with a symbol & could able to retrieve the stock price & other details. Is there any API for stock symbol searches Any help would be great .. Thanks

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  • Sort a list numerically in Python

    - by Matthew
    So I have this list, we'll call it listA. I'm trying to get the [3] item in each list e.g. ['5.01','5.88','2.10','9.45','17.58','2.76'] in sorted order. So the end result would start the entire list over again with Santa at the top. Does that make any sense? [['John Doe', u'25.78', u'20.77', '5.01'], ['Jane Doe', u'21.08', u'15.20', '5.88'], ['James Bond', u'20.57', u'18.47', '2.10'], ['Michael Jordan', u'28.50', u'19.05', '9.45'], ['Santa', u'31.13', u'13.55', '17.58'], ['Easter Bunny', u'17.20', u'14.44', '2.76']]

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  • How to stop attributes from being pickled in Python

    - by Ries
    I am using gnosis.xml.pickle to convert an object of my own class to xml. The object is initialized so that: self.logger = MyLogger() But when I do dump the object to a string I get an exception stating that the pickler encountered an unpickleable type . Is there a way to 'tag' the logger attribute so that pickler will know not to try and pickle that attribute?

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  • Checking if a string's characters are ascending alphabetically and its ascent is evenly spaced python

    - by FRU5TR8EDD
    So need to check if a string's characters are ascending alphabetically and if that ascent is evenly spaced. a = "abc" b = "ceg" So a is alphabetically ascending and it's spacing is 1 (if you convert to the ordinal values they are 97,98,99). And b is also alphabetically ascending and it's spacing is 2 (99,101,103). And I am sticking with the following code: a = 'jubjub' words1 = [] ords = [ord(letter) for letter in a] diff = ords[1] - ords[0] for ord_val in range(1, len(ords)-1): if diff > 0: if ords[ord_val + 1] - ords[ord_val] == diff: if a not in words1: words1.append((a, diff)) print words1 How come 'jubjub' works, 'ace' works, but 'catcat' doesn't?

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  • Simple python mvc framework

    - by Overdose
    Is there any lightweight mvc webframework which is not necessary to install to the server? I need something simple, that i could just copy to the shared hosting. And it must handle urls other that localhost/test.py, something like this localhost/Blog/test

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  • Python Frequently Asked Questions

    - by Casebash
    After seeing this suggestion for creating tag homepages/FAQs, I thought it'd be best to go on ahead and start collecting links to frequently asked questions to demonstrate how this would work. Object Oriented Metaclasses Missing features Enums Tools Available IDEs?

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  • python regular expressions, how to extract longest of overlapping groups

    - by xulochavez
    Hi How can I extract the longest of groups which start the same way For example, from a given string, I want to extract the longest match to either CS or CSI. I tried this "(CS|CSI).*" and it it will return CS rather than CSI even if CSI is available. If I do "(CSI|CS).*" then I do get CSI if it's a match, so I gues the solution is to always place the shorter of the overlaping groups after the longer one. Is there a clearer way to express this with re's? somehow it feels confusing that the result depends on the order you link the groups.

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  • Python Threading, loading one thread after another

    - by Michael
    Hi, I'm working on a media player and am able to load in a single .wav and play it. As seen in the code below. foo = wx.FileDialog(self, message="Open a .wav file...", defaultDir=os.getcwd(), defaultFile="", style=wx.FD_MULTIPLE) foo.ShowModal() queue = foo.GetPaths() self.playing_thread = threading.Thread(target=self.playFile, args=(queue[0], 'msg')) self.playing_thread.start() But the problem is, when I try to make the above code into a loop for multiple .wav files. Such that while playing_thread.isActive == True, create and .start() the thread. Then if .isActive == False, pop queue[0] and load the next .wav file. Problem is, my UI will lock up and I'll have to terminate the program. Any ideas would be appreciated.

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  • Normalising book titles - Python

    - by RadiantHex
    Hi folks, I have a list of books titles: "The Hobbit: 70th Anniversary Edition" "The Hobbit" "The Hobbit (Illustrated/Collector Edition)[There and Back Again]" "The Hobbit: or, There and Back Again" "The Hobbit: Gift Pack" and so on... I thought that if I normalised the titles somehow, it would be easier to implement an automated way to know what book each edition is referring to. normalised = ''.join([char for char in title if char in (string.ascii_letters + string.digits)]) or normalised = '' for char in title: if char in ':/()|': break normalised += char return normalised But obviously they are not working as intended, as titles can contain special characters and editions can basically have very different title layouts. Help would be very much appreciated! Thanks :)

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  • Threaded Python port scanner

    - by Amnite
    I am having issues with a port scanner I'm editing to use threads. This is the basics for the original code: for i in range(0, 2000): s = socket(AF_INET, SOCK_STREAM) result = s.connect_ex((TargetIP, i)) if(result == 0) : c = "Port %d: OPEN\n" % (i,) s.close() This takes approx 33 minutes to complete. So I thought I'd thread it to make it run a little faster. This is my first threading project so it's nothing too extreme, but I've ran the following code for about an hour and get no exceptions yet no output. Am I just doing the threading wrong or what? import threading from socket import * import time a = 0 b = 0 c = "" d = "" def ScanLow(): global a global c for i in range(0, 1000): s = socket(AF_INET, SOCK_STREAM) result = s.connect_ex((TargetIP, i)) if(result == 0) : c = "Port %d: OPEN\n" % (i,) s.close() a += 1 def ScanHigh(): global b global d for i in range(1001, 2000): s = socket(AF_INET, SOCK_STREAM) result = s.connect_ex((TargetIP, i)) if(result == 0) : d = "Port %d: OPEN\n" % (i,) s.close() b += 1 Target = raw_input("Enter Host To Scan:") TargetIP = gethostbyname(Target) print "Start Scan On Host ", TargetIP Start = time.time() threading.Thread(target = ScanLow).start() threading.Thread(target = ScanHigh).start() e = a + b while e < 2000: f = raw_input() End = time.time() - Start print c print d print End g = raw_input()

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  • Python unittest: Generate multiple tests programmatically?

    - by Rosarch
    I have a function to test, under_test, and a set of expected input/output pairs: [ (2, 332), (234, 99213), (9, 3), # ... ] I would like each one of these input/output pairs to be tested in its own test_* method. Is that possible? This is sort of what I want, but forcing every single input/output pair into a single test: class TestPreReqs(unittest.TestCase): def setUp(self): self.expected_pairs = [(23, 55), (4, 32)] def test_expected(self): for exp in self.expected_pairs: self.assertEqual(under_test(exp[0]), exp[1]) if __name__ == '__main__': unittest.main()

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  • Concatenation of many lists in Python

    - by Space_C0wb0y
    Suppose i have a function like this: def getNeighbors(vertex) which returns a list of vertices that are neighbors of the given vertex. Now i want to create a list with all the neighbors of the neighbors. I do that like this: listOfNeighborsNeighbors = [] for neighborVertex in getNeighbors(vertex): listOfNeighborsNeighbors.append(getNeighbors(neighborsVertex)) Is there a more pythonic way to do that?

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  • Number of elements in Python Set

    - by Tim
    I have a list of phone numbers that have been dialed (nums_dialed). I also have a set of phone numbers which are the number in a client's office (client_nums) How do I efficiently figure out how many times I've called a particular client (total) For example: >>>nums_dialed=[1,2,2,3,3] >>>client_nums=set([2,3]) >>>??? total=4 Problem is that I have a large-ish dataset: len(client_nums) ~ 10^5; and len(nums_dialed) ~10^3.

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  • difference between 2 pieces Python code

    - by draw
    Hello, I'm doing an exercise as following: # B. front_x # Given a list of strings, return a list with the strings # in sorted order, except group all the strings that begin with 'x' first. # e.g. ['mix', 'xyz', 'apple', 'xanadu', 'aardvark'] yields # ['xanadu', 'xyz', 'aardvark', 'apple', 'mix'] # Hint: this can be done by making 2 lists and sorting each of them # before combining them. sample solution: def front_x(words): listX = [] listO = [] for w in words: if w.startswith('x'): listX.append(w) else: listO.append(w) listX.sort() listO.sort() return listX + listO my solution: def front_x(words): listX = [] for w in words: if w.startswith('x'): listX.append(w) words.remove(w) listX.sort() words.sort() return listX + words as I tested my solution, the result is a little weird. Here is the source code with my solution: http://dl.dropbox.com/u/559353/list1.py. You might want to try it out.

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  • Error when feeding a mysql db with a python-parsed data

    - by Barnabe
    I use this bit of code to feed some data i have parsed from a web page to a mysql database c=db.cursor() c.executemany( """INSERT INTO data (SID, Time, Value1, Level1, Value2, Level2, Value3, Level3, Value4, Level4, Value5, Level5, ObsDate) VALUES (%s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s)""", clean_data ) The parsed data looks like this (there are several hundred such lines) clean_data = [(161,00:00:00,8.19,1,4.46,4,7.87,4,6.54,null,4.45,6,2010-04-12),(162,00:00:00,7.55,1,9.52,1,1.90,1,4.76,null,0.14,1,2010-04-12),(164,00:00:00,8.01,1,8.09,1,0,null,8.49,null,0.20,2,2010-04-12),(166,00:00:00,8.30,1,4.77,4,10.99,5,9.11,null,0.36,2,2010-04-12)] if i hard code the data as above mySQL accepts my request (except for some quibbles about formatting) but if the variable clean_data is instead defined as the result of the parsing code, like this: cleaner = [(""" $!!'""", ')]'),(' $!!', ') etc etc] def processThis(str,lst): for find, replace in lst: str = str.replace(find, replace) return str clean_data = processThis(data,cleaner) then i get the dreaded "TypeError: not enough arguments for format string" After playing with formatting options for a few hours (I am very new to this) I am confused... what is the difference between the hard coded data and the result of the processThis function as fas as mySQL is concerned? Any idea greatly appreciated...

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  • How to make buttons in python/pygame?

    - by user1334014
    I'm making a game in pygame and on the first screen I want there to be buttons that you can press to (i) start the game, (ii) load a new screen with instructions, and (iii) exit the program. I've found this code online for button making, but I don't really understand it (I'm not that good at object oriented programming). If I could get some explanation as to what it's doing that would be great. Also, when I use it and try to open a file on my computer using the file path, I get the error sh: filepath :Permission denied, which I don't know how to solve. #load_image is used in most pygame programs for loading images def load_image(name, colorkey=None): fullname = os.path.join('data', name) try: image = pygame.image.load(fullname) except pygame.error, message: print 'Cannot load image:', fullname raise SystemExit, message image = image.convert() if colorkey is not None: if colorkey is -1: colorkey = image.get_at((0,0)) image.set_colorkey(colorkey, RLEACCEL) return image, image.get_rect() class Button(pygame.sprite.Sprite): """Class used to create a button, use setCords to set position of topleft corner. Method pressed() returns a boolean and should be called inside the input loop.""" def __init__(self): pygame.sprite.Sprite.__init__(self) self.image, self.rect = load_image('button.png', -1) def setCords(self,x,y): self.rect.topleft = x,y def pressed(self,mouse): if mouse[0] > self.rect.topleft[0]: if mouse[1] > self.rect.topleft[1]: if mouse[0] < self.rect.bottomright[0]: if mouse[1] < self.rect.bottomright[1]: return True else: return False else: return False else: return False else: return False def main(): button = Button() #Button class is created button.setCords(200,200) #Button is displayed at 200,200 while 1: for event in pygame.event.get(): if event.type == MOUSEBUTTONDOWN: mouse = pygame.mouse.get_pos() if button.pressed(mouse): #Button's pressed method is called print ('button hit') if __name__ == '__main__': main() Thank you to anyone who can help me.

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