Example:

</plugin>       
       <plugin>
           <groupId>org.jvnet.jaxb2.maven2</groupId>
           <artifactId>maven-jaxb2-plugin</artifactId>
           <version>0.7.1</version>
           <executions>
             <execution>
               <goals>
                 <goal>generate</goal>
               </goals>
             </execution>
           </executions>
            <configuration>
             <schemaDirectory>src/main/resources/dir1</schemaDirectory>
              <schemaIncludes>
                  <include>schema1.xsd</include>
              </schemaIncludes>
              <generatePackage>schema1.package</generatePackage>
           </configuration>
         </plugin>
          <plugin>
           <groupId>org.jvnet.jaxb2.maven2</groupId>
           <artifactId>maven-jaxb2-plugin</artifactId>
           <version>0.7.1</version>
           <executions>
             <execution>
               <goals>
                 <goal>generate</goal>
               </goals>
             </execution>
           </executions>
            <configuration>
             <schemaDirectory>src/main/resources/dir2</schemaDirectory>
              <schemaIncludes>
                  <include>schema2.xsd</include>
              </schemaIncludes>
              <generatePackage>schema2.package</generatePackage>
           </configuration>
         </plugin>
       </plugins>

What happened: Maven executes the the first plugin. Then deletes the target folder and creates the second package, which then is visible.

I tried to set target/somedir1 for the first configuration and target/somedir2 for the second configuration. But the behavior does not not change? Any ideas? I do not want to generate the packages directly in the src/main/java folder, because these packages are genereated and should not be mixed with manual created classes.