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  • Writing csv files with python with exact formatting parameters

    - by Ben Harrison
    I'm having trouble with processing some csv data files for a project. The project's programmer has moved onto greener pastures, and now I'm trying to finish the data analysis up (I did/do the statistical analysis.) The programmer suggested using python/csv reader to help break down the files, which I've had some success with, but not in a way I can use. This code is a little different from what I was trying before. I am essentially attempting to create an array. In the raw data format, the first 7 rows contain no data, and then each column contains 50 experiments, each with 4000 rows, for 200000 some rows total. What I want to do is take each column, and make it an individual csv file, with each experiment in its own column. So it would be an array of 50 columns and 4000 rows for each data type. The code here does break down the correct values, I think the logic is okay, but it is breaking down the opposite of how I want it. I want the separators without quotes (the commas and spaces) and I want the element values in quotes. Right now it is doing just the opposite for both, element values with no quotes, and the separators in quotes. I've spent several hours trying to figure out how to do this to no avail, import csv ifile = open('00_follow_maverick.csv') epistemicfile = open('00_follower_maverick_EP.csv', 'w') reader = csv.reader(ifile) colnum = 0 rownum = 0 y = 0 z = 8 for column in reader: rownum = 4000 * y + z for element in column: writer = csv.writer(epistemicfile) if y <= 50: y = y + 1 writer.writerow([element]) writer.writerow(',') rownum = x * y + z if y > 50: y = 0 z = z + 1 writer.writerow(' ') rownum = x * y + z if z >= 4008: break What is going on: I am taking each row in the raw data file in iterations of 4000, so that I can separate them with commas for the 50 experiments. When y, the experiment indicator here, reaches 50, it resets back to experiment 0, and adds 1 to z, which tells it which row to look at, by the formula of 4000 * y + z. When it completes the rows for all 50 experiments, it is finished. The problem here is that I don't know how to get python to write the actual values in quotes, and my separators outside of quotes. Any help will be most appreciated. Apologies if this seems a stupid question, I have no programming experience, this is my first attempt ever. Thank you.

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  • Which python mpi library to use?

    - by Dana the Sane
    I'm starting work on some simulations using MPI and want to do the programming in Python/scipy. The scipy site lists a number of mpi libraries, but I was hoping to get feedback on quality, ease of use, etc from anyone who has used one.

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  • Reading a MIDI file in Python

    - by Logan
    I want to be able to read events from a MIDI file in Python. I have looked for libraries, but can't find one that works with my MIDI file in windows. I do not need to do anything real time, and just want a simple library that gives me events and times. Would it be easier to write one for myself? Any help would be appreciated.

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  • Launch a webpage on a Firefox (win) tab using Python

    - by Leandro Ardissone
    Hi, I'm trying to launch a website url in a new tab using python in that way, but it didn't worked in these both ways: Method 1: os.system('C:\Program Files\Mozilla Firefox\Firefox.exe -new-tab http://www.google.com/'); and Method 2: os.startfile('C:\Program Files\Mozilla Firefox\Firefox.exe -new-tab http://www.google.com/'); If I don't add the parameters (-new-tab http://www.google.com/) it works, opening the default page.

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  • Get CGI Fields from URL Python

    - by user299196
    When using the cgi module in Python, I can't seem to figure out how to extract CGI variables in the URL. For example if the url servercgi.py?name=user , how do I get 'name' after import cgi? For some reason, form.getvalue and form['user'] do not work but if I print the object, I see something like FieldStorage(None, None, [MiniFieldStoreage('name', 'user')]).

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  • Python: using doctests for classes

    - by Adam Matan
    Hi, Is it possible to use Python's doctest concept for classes, not just functions? If so, where shall I put the doctests - at the class' docstring, or at the constructor's docstring? To clarify, I'm looking for something like: class Test: """ >>> a=Test(5) >>> a.multiply_by_2() 10 """ def __init__(self, number): self._number=number def multiply_by_2(self): return self._number*2 Thanks in advance, Adam

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  • Japanese in python function

    - by ha22109
    Hello All, I wrote a function in python which is used to tell me whether the two words are similar or not. but now i want to pass japanese text in my same function.It is giving error not a ascii character.I tried using utf -8 ecoding, but then it giving the same error Non-ASCII character '\xe3' in file Is there any way to do that.I cant generate the msg file for that since the 2 keyword will be not be constant.

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  • Python: Cannot concatenate str and NoneType objects

    - by Chase Higgins
    sql = """ INSERT INTO [SCHOOLINFO] VALUES( '""" + self.accountNo + """', '""" + self.altName + """', '""" + self.address1 + """', '""" + self.address2 + """', '""" + self.city + """', '""" + self.state + """', '""" + self.zipCode + """', '""" + self.phone1 + """', '""" + self.phone2 + """', '""" + self.fax + """', '""" + self.contactName + """', '""" + self.contactEmail + """', '""" + self.prize_id + """', '""" + self.shipping + """', '""" + self.chairTempPass + """', '""" + self.studentCount + """' ) """; I have the following code and Python keeps throwing the error that it cannon concatenate strings and nonetype objects. The thing is I have verified every variable here is in fact a string and is not null. I have been stuck on this for quite some time today, and any help would be greatly appreciated.

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  • For-loops in python

    - by Znarkus
    What is the best way of doing this in Python? for (v = n / 2 - 1; v >= 0; v--) I actually tried Google first, but as far as I can see the only solution would be to use while.

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  • Python multiprocessing global variable updates not returned to parent

    - by user1459256
    I am trying to return values from subprocesses but these values are unfortunately unpicklable. So I used global variables in threads module with success but have not been able to retrieve updates done in subprocesses when using multiprocessing module. I hope I'm missing something. The results printed at the end are always the same as initial values given the vars dataDV03 and dataDV04. The subprocesses are updating these global variables but these global variables remain unchanged in the parent. import multiprocessing # NOT ABLE to get python to return values in passed variables. ants = ['DV03', 'DV04'] dataDV03 = ['', ''] dataDV04 = {'driver': '', 'status': ''} def getDV03CclDrivers(lib): # call global variable global dataDV03 dataDV03[1] = 1 dataDV03[0] = 0 # eval( 'CCL.' + lib + '.' + lib + '( "DV03" )' ) these are unpicklable instantiations def getDV04CclDrivers(lib, dataDV04): # pass global variable dataDV04['driver'] = 0 # eval( 'CCL.' + lib + '.' + lib + '( "DV04" )' ) if __name__ == "__main__": jobs = [] if 'DV03' in ants: j = multiprocessing.Process(target=getDV03CclDrivers, args=('LORR',)) jobs.append(j) if 'DV04' in ants: j = multiprocessing.Process(target=getDV04CclDrivers, args=('LORR', dataDV04)) jobs.append(j) for j in jobs: j.start() for j in jobs: j.join() print 'Results:\n' print 'DV03', dataDV03 print 'DV04', dataDV04 I cannot post to my question so will try to edit the original. Here is the object that is not picklable: In [1]: from CCL import LORR In [2]: lorr=LORR.LORR('DV20', None) In [3]: lorr Out[3]: <CCL.LORR.LORR instance at 0x94b188c> This is the error returned when I use a multiprocessing.Pool to return the instance back to the parent: Thread getCcl (('DV20', 'LORR'),) Process PoolWorker-1: Traceback (most recent call last): File "/alma/ACS-10.1/casa/lib/python2.6/multiprocessing/process.py", line 232, in _bootstrap self.run() File "/alma/ACS-10.1/casa/lib/python2.6/multiprocessing/process.py", line 88, in run self._target(*self._args, **self._kwargs) File "/alma/ACS-10.1/casa/lib/python2.6/multiprocessing/pool.py", line 71, in worker put((job, i, result)) File "/alma/ACS-10.1/casa/lib/python2.6/multiprocessing/queues.py", line 366, in put return send(obj) UnpickleableError: Cannot pickle <type 'thread.lock'> objects In [5]: dir(lorr) Out[5]: ['GET_AMBIENT_TEMPERATURE', 'GET_CAN_ERROR', 'GET_CAN_ERROR_COUNT', 'GET_CHANNEL_NUMBER', 'GET_COUNT_PER_C_OP', 'GET_COUNT_REMAINING_OP', 'GET_DCM_LOCKED', 'GET_EFC_125_MHZ', 'GET_EFC_COMB_LINE_PLL', 'GET_ERROR_CODE_LAST_CAN_ERROR', 'GET_INTERNAL_SLAVE_ERROR_CODE', 'GET_MAGNITUDE_CELSIUS_OP', 'GET_MAJOR_REV_LEVEL', 'GET_MINOR_REV_LEVEL', 'GET_MODULE_CODES_CDAY', 'GET_MODULE_CODES_CMONTH', 'GET_MODULE_CODES_DIG1', 'GET_MODULE_CODES_DIG2', 'GET_MODULE_CODES_DIG4', 'GET_MODULE_CODES_DIG6', 'GET_MODULE_CODES_SERIAL', 'GET_MODULE_CODES_VERSION_MAJOR', 'GET_MODULE_CODES_VERSION_MINOR', 'GET_MODULE_CODES_YEAR', 'GET_NODE_ADDRESS', 'GET_OPTICAL_POWER_OFF', 'GET_OUTPUT_125MHZ_LOCKED', 'GET_OUTPUT_2GHZ_LOCKED', 'GET_PATCH_LEVEL', 'GET_POWER_SUPPLY_12V_NOT_OK', 'GET_POWER_SUPPLY_15V_NOT_OK', 'GET_PROTOCOL_MAJOR_REV_LEVEL', 'GET_PROTOCOL_MINOR_REV_LEVEL', 'GET_PROTOCOL_PATCH_LEVEL', 'GET_PROTOCOL_REV_LEVEL', 'GET_PWR_125_MHZ', 'GET_PWR_25_MHZ', 'GET_PWR_2_GHZ', 'GET_READ_MODULE_CODES', 'GET_RX_OPT_PWR', 'GET_SERIAL_NUMBER', 'GET_SIGN_OP', 'GET_STATUS', 'GET_SW_REV_LEVEL', 'GET_TE_LENGTH', 'GET_TE_LONG_FLAG_SET', 'GET_TE_OFFSET_COUNTER', 'GET_TE_SHORT_FLAG_SET', 'GET_TRANS_NUM', 'GET_VDC_12', 'GET_VDC_15', 'GET_VDC_7', 'GET_VDC_MINUS_7', 'SET_CLEAR_FLAGS', 'SET_FPGA_LOGIC_RESET', 'SET_RESET_AMBSI', 'SET_RESET_DEVICE', 'SET_RESYNC_TE', 'STATUS', '_HardwareDevice__componentName', '_HardwareDevice__hw', '_HardwareDevice__stickyFlag', '_LORRBase__logger', '__del__', '__doc__', '__init__', '__module__', '_devices', 'clearDeviceCommunicationErrorAlarm', 'getControlList', 'getDeviceCommunicationErrorCounter', 'getErrorMessage', 'getHwState', 'getInternalSlaveCanErrorMsg', 'getLastCanErrorMsg', 'getMonitorList', 'hwConfigure', 'hwDiagnostic', 'hwInitialize', 'hwOperational', 'hwSimulation', 'hwStart', 'hwStop', 'inErrorState', 'isMonitoring', 'isSimulated'] In [6]:

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  • Fitting a gamma distribution with (python) Scipy

    - by Archanimus
    Hi folks, Can anyone help me out in fitting a gamma distribution in python? Well, I've got some data : X and Y coordinates, and I want to find the gamma parameters that fit this distribution... In the Scipy doc, it turns out that a fit method actually exists but I don't know how to use it :s.. first, in wich format the argument "data" must be, and how can I provide the seconde argument (the parameters) since this what I'm looking for ??? Thanks a lot!

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  • Write xml file using lxml library in Python

    - by systempuntoout
    I'm using lxml to create an XML file from scratch; having a code like this: from lxml import etree root = etree.Element("root") root.set("interesting", "somewhat") child1 = etree.SubElement(root, "test") How do i write root Element object to an xml file using write() method of ElementTree class?

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  • Reading Python Documentation for 3rd party modules

    - by Shadyabhi
    I recently downloaded IMDbpy moduele.. When I do, import imdb help(imdb) i dont get the full documentation.. I have to do im = imdb.IMDb() help(im) to see the available methods. I dont like this console interface. Is there any better way of reading the doc. I mean all the doc related to module imdb in one page..

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  • How to get a html elements with python lxml

    - by Damiano
    Hello! I have this html code: <table> <tr> <td class="test"><b><a href="">aaa</a></b></td> <td class="test">bbb</td> <td class="test">ccc</td> <td class="test"><small>ddd</small></td> </tr> <tr> <td class="test"><b><a href="">eee</a></b></td> <td class="test">fff</td> <td class="test">ggg</td> <td class="test"><small>hhh</small></td> </tr> </table> I use this Python code to extract all <td class="test"> with lxml module. import urllib2 import lxml.html code = urllib.urlopen("http://www.example.com/page.html").read() html = lxml.html.fromstring(code) result = html.xpath('//td[@class="test"][position() = 1 or position() = 4]') It works good! The result is: <td class="test"><b><a href="">aaa</a></b></td> <td class="test"><small>ddd</small></td> <td class="test"><b><a href="">eee</a></b></td> <td class="test"><small>hhh</small></td> (so the first and the fourth column of each <tr>) Now, I have to extract: aaa (the title of the link) ddd (text between <small> tag) eee (the title of the link) hhh (text between <small> tag) How could I extract these values? (the problem is that I have to remove <b> tag and get the title of the anchor on the first column and remove <small> tag on the forth column) Thank you!

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