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• Scientific Linux - mysql and apachefail to start on reboot

  - by Derek Deed

  Both mysqld and httpd fail to restart following a reboot of the server, although chkconfig --list shows both daemons set to on for run levels 2,3,4 & 5 All control is being exectuted via Webmin Reboot server – MySQl and Apache not running MySQL Database Server MySQL version 5.1.69 MySQL is not running on your system - database list could not be retrieved. Click this button to start the MySQL database server on your system with the command /etc/rc.d/init.d/mysqld start. This Webmin module cannot administer the database until it is started. Apache Webserver Apache version 2.2.15 Start Apache Search Docs.. Global configuration Existing virtual hosts Create virtual host Select all. | Invert selection. Default Server Defines the default settings for all other virtual servers, and processes any unhandled requests. Address Any Port Any Server Name Automatic Document Root /var/www/drupal Virtual Server Processes all requests on port 443 not handled by other virtual servers. Address Any Port 443 Server Name Automatic Document Root /var/www/drupal Select all. | Invert selection. chkconfig --list mysqld mysqld 0:off 1:off 2:on 3:on 4:on 5:on 6:off chkconfig --list httpd httpd 0:off 1:off 2:on 3:on 4:on 5:on 6:off Manually Restart Apache chkconfig --list httpd httpd 0:off 1:off 2:on 3:on 4:on 5:on 6:off Manually Restart MySQL chkconfig --list mysqld mysqld 0:off 1:off 2:on 3:on 4:on 5:on 6:off Everything now running okay; but no difference in the chkconfig outputs above. Set chkconfig --levels 235 httpd on /etc/init.d/httpd start The same for mysqld but no change in operation. Log files show that the shutdown has been completed successfully; but there is no indication of the service restarting until it is executed manually: 131112 13:59:15 InnoDB: Starting shutdown... 131112 13:59:16 InnoDB: Shutdown completed; log sequence number 0 881747021 131112 13:59:16 [Note] /usr/libexec/mysqld: Shutdown complete 131112 13:59:16 mysqld_safe mysqld from pid file /var/run/mysqld/mysqld.pid ended 131112 14:09:52 mysqld_safe Starting mysqld daemon with databases from /var/lib/mysql 131112 14:09:52 InnoDB: Initializing buffer pool, size = 8.0M 131112 14:09:52 InnoDB: Completed initialization of buffer pool [Tue Nov 12 13:59:13 2013] [notice] suEXEC mechanism enabled (wrapper: /usr/sbin/suexec) [Tue Nov 12 13:59:13 2013] [notice] Digest: generating secret for digest authentication ... [Tue Nov 12 13:59:13 2013] [notice] Digest: done [Tue Nov 12 13:59:14 2013] [notice] Apache/2.2.15 (Unix) DAV/2 PHP/5.3.3 mod_ssl/2.2.15 OpenSSL/1.0.0-fips configured -- resuming normal operations [Tue Nov 12 13:59:14 2013] [notice] caught SIGTERM, shutting down [Tue Nov 12 14:27:13 2013] [notice] suEXEC mechanism enabled (wrapper: /usr/sbin/suexec) [Tue Nov 12 14:27:13 2013] [notice] Digest: generating secret for digest authentication ... [Tue Nov 12 14:27:13 2013] [notice] Digest: done [Tue Nov 12 14:27:13 2013] [notice] Apache/2.2.15 (Unix) DAV/2 PHP/5.3.3 mod_ssl/2.2.15 OpenSSL/1.0.0-fips configured -- resuming normal operations Is anyone able to shed any light on this problem, Cheers, Derek.

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• Hudson plugin, Java error "... disagree on InnerClasses attribute"

  - by StackedCrooked

  I am trying to be able to step through the code of a Hudson plugin called SVNPublisher. I checked out the code for SVNPublisher, used Netbeans to open the project, and clicked "Debug Main project". This results in a Firefox window opening address http://localhost:8080 which shows the Hudson main page. Clicking the "New Job" link results in an error page: HTTP ERROR: 500 jar:file:/home/francis/svn/svnpublisher/target/work/webapp/WEB-INF/lib/hudson-core-1.319.jar!/lib/hudson/newFromList/form.jelly:43:47: <j:forEach> hudson.scm.SubversionTagAction and hudson.scm.SubversionTagAction$DescriptorImpl disagree on InnerClasses attribute RequestURI=/newJob Caused by: org.apache.commons.jelly.JellyTagException: jar:file:/home/francis/svn/svnpublisher/target/work/webapp/WEB-INF/lib/hudson-core-1.319.jar!/lib/hudson/newFromList/form.jelly:43:47: hudson.scm.SubversionTagAction and hudson.scm.SubversionTagAction$DescriptorImpl disagree on InnerClasses attribute at org.apache.commons.jelly.impl.TagScript.handleException(TagScript.java:713) at org.apache.commons.jelly.impl.TagScript.run(TagScript.java:282) at org.apache.commons.jelly.impl.ScriptBlock.run(ScriptBlock.java:95) ... I am very new to Hudson and not very experienced with Java so I'm pretty much clueless on the meaning of this error. Can anyone help?

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• How do I read the manifest file for a webapp running in apache tomcat?

  - by Nik Reiman

  I have a webapp which contains a manifest file, in which I write the current version of my application during an ant build task. The manifest file is created correctly, but when I try to read it in during runtime, I get some strange side-effects. My code for reading in the manifest is something like this: InputStream manifestStream = Thread.currentThread() .getContextClassLoader() .getResourceAsStream("META-INFFFF/MANIFEST.MF"); try { Manifest manifest = new Manifest(manifestStream); Attributes attributes = manifest.getMainAttributes(); String impVersion = attributes.getValue("Implementation-Version"); mVersionString = impVersion; } catch(IOException ex) { logger.warn("Error while reading version: " + ex.getMessage()); } When I attach eclipse to tomcat, I see that the above code works, but it seems to get a different manifest file than the one I expected, which I can tell because the ant version and build timestamp are both different. Then, I put "META-INFFFF" in there, and the above code still works! This means that I'm reading some other manifest, not mine. I also tried this.getClass().getClassLoader().getResourceAsStream(...) But the result was the same. What's the proper way to read the manifest file from inside of a webapp running in tomcat? Edit: Thanks for the suggestions so far. Also, I should note that I am running tomcat standalone; I launch it from the command line, and then attach to the running instance in Eclipse's debugger. That shouldn't make a difference, should it?

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• IRQ problem with 2.6.32/2.6.39 kernel on Debian Squeeze x86_64

  - by MasterM

  I recently assembled a new computer so that all hardware is pretty new. Since then I've been experiencing some problem with IRQs when running Debian 6.0. On random occasions, usually after an hour or so of running I hear a beep and this shows up in dmesg: [ 3537.762795] irq 16: nobody cared (try booting with the "irqpoll" option) [ 3537.762797] Pid: 0, comm: swapper Tainted: P W O 2.6.39-2-amd64 #1 [ 3537.762798] Call Trace: [ 3537.762799] <IRQ> [<ffffffff810924d4>] ? __report_bad_irq+0x3a/0xa2 [ 3537.762803] [<ffffffff810926a4>] ? note_interrupt+0x168/0x1da [ 3537.762805] [<ffffffff81090dd4>] ? handle_irq_event_percpu+0x171/0x18f [ 3537.762807] [<ffffffff8100e0e2>] ? read_tsc+0x5/0x16 [ 3537.762809] [<ffffffff8106b8a2>] ? update_ts_time_stats+0x32/0x6b [ 3537.762810] [<ffffffff81090e26>] ? handle_irq_event+0x34/0x52 [ 3537.762812] [<ffffffff81063fb7>] ? sched_clock_idle_wakeup_event+0x12/0x1c [ 3537.762813] [<ffffffff81092df2>] ? handle_fasteoi_irq+0x82/0xa4 [ 3537.762815] [<ffffffff8100aadb>] ? handle_irq+0x1a/0x23 [ 3537.762816] [<ffffffff8100a384>] ? do_IRQ+0x45/0xaa [ 3537.762818] [<ffffffff81332c93>] ? common_interrupt+0x13/0x13 [ 3537.762818] <EOI> [<ffffffff81332c8e>] ? common_interrupt+0xe/0x13 [ 3537.762821] [<ffffffff81026800>] ? native_safe_halt+0x2/0x3 [ 3537.762829] [<ffffffffa016ed58>] ? acpi_idle_do_entry+0x39/0x62 [processor] [ 3537.762831] [<ffffffffa016edde>] ? acpi_idle_enter_c1+0x5d/0xad [processor] [ 3537.762834] [<ffffffff81261033>] ? cpuidle_idle_call+0x11f/0x1cc [ 3537.762835] [<ffffffff81008dd2>] ? cpu_idle+0xab/0xe1 [ 3537.762837] [<ffffffff8169fc60>] ? start_kernel+0x3e0/0x3eb [ 3537.762838] [<ffffffff8169f3c8>] ? x86_64_start_kernel+0x102/0x10f [ 3537.762839] handlers: [ 3537.762840] [<ffffffffa0358d5a>] (rtl8169_interrupt+0x0/0x2d7 [r8169]) [ 3537.762842] [<ffffffffa08ff2ca>] (nv_kern_isr+0x0/0x54 [nvidia]) [ 3537.762902] Disabling IRQ #16 After that Xorg either hogs on CPU or is unstable (up to hanging the system completely). When I restart Xorg everything is fine again and the problem doesn't occur until next reboot. I tried to upgrade the kernel from stock 2.6.32 to 2.6.39 from unstable repository but that didn't help. Booting with irqpoll option only seems to prolong the initial time period after which the problem occurs. I'm using latest NVIDIA drivers and Realtek firmware from firmware-realtek package. I have two GTX 560Ti that run in SLI. Disabling SLI or taking out one card completely doesn't solve the problem either. Output of uname -a is: Linux whitestar 2.6.39-2-amd64 #1 SMP Wed Jun 8 11:01:04 UTC 2011 x86_64 GNU/Linux Output of lspci is: 00:00.0 Host bridge: Intel Corporation Sandy Bridge DRAM Controller (rev 09) 00:01.0 PCI bridge: Intel Corporation Sandy Bridge PCI Express Root Port (rev 09) 00:01.1 PCI bridge: Intel Corporation Sandy Bridge PCI Express Root Port (rev 09) 00:16.0 Communication controller: Intel Corporation Cougar Point HECI Controller #1 (rev 04) 00:19.0 Ethernet controller: Intel Corporation 82579V Gigabit Network Connection (rev 05) 00:1a.0 USB Controller: Intel Corporation Cougar Point USB Enhanced Host Controller #2 (rev 05) 00:1b.0 Audio device: Intel Corporation Cougar Point High Definition Audio Controller (rev 05) 00:1c.0 PCI bridge: Intel Corporation Cougar Point PCI Express Root Port 1 (rev b5) 00:1c.1 PCI bridge: Intel Corporation Cougar Point PCI Express Root Port 2 (rev b5) 00:1c.2 PCI bridge: Intel Corporation Cougar Point PCI Express Root Port 3 (rev b5) 00:1c.4 PCI bridge: Intel Corporation Cougar Point PCI Express Root Port 5 (rev b5) 00:1c.6 PCI bridge: Intel Corporation 82801 PCI Bridge (rev b5) 00:1d.0 USB Controller: Intel Corporation Cougar Point USB Enhanced Host Controller #1 (rev 05) 00:1f.0 ISA bridge: Intel Corporation Cougar Point LPC Controller (rev 05) 00:1f.2 SATA controller: Intel Corporation Cougar Point 6 port SATA AHCI Controller (rev 05) 00:1f.3 SMBus: Intel Corporation Cougar Point SMBus Controller (rev 05) 01:00.0 VGA compatible controller: nVidia Corporation Device 1200 (rev a1) 01:00.1 Audio device: nVidia Corporation Device 0e0c (rev a1) 02:00.0 VGA compatible controller: nVidia Corporation Device 1200 (rev a1) 02:00.1 Audio device: nVidia Corporation Device 0e0c (rev a1) 04:00.0 USB Controller: NEC Corporation uPD720200 USB 3.0 Host Controller (rev 04) 06:00.0 USB Controller: NEC Corporation uPD720200 USB 3.0 Host Controller (rev 04) 07:00.0 PCI bridge: Device 1b21:1080 (rev 01) 08:02.0 Ethernet controller: Realtek Semiconductor Co., Ltd. RTL-8110SC/8169SC Gigabit Ethernet (rev 10) 08:03.0 FireWire (IEEE 1394): VIA Technologies, Inc. VT6306/7/8 [Fire II(M)] IEEE 1394 OHCI Controller (rev c0) Contents of /proc/interrupts: CPU0 CPU1 CPU2 CPU3 CPU4 CPU5 CPU6 CPU7 0: 77 0 0 0 0 0 0 0 IO-APIC-edge timer 1: 2 0 0 0 0 0 0 0 IO-APIC-edge i8042 8: 1 0 0 0 0 0 0 0 IO-APIC-edge rtc0 9: 0 0 0 0 0 0 0 0 IO-APIC-fasteoi acpi 12: 4 0 0 0 0 0 0 0 IO-APIC-edge i8042 16: 699083 0 0 0 0 0 0 0 IO-APIC-fasteoi nvidia, eth0 17: 87810 0 0 0 0 0 0 0 IO-APIC-fasteoi firewire_ohci, hda_intel, nvidia 18: 242 0 0 0 0 0 0 0 IO-APIC-fasteoi hda_intel 23: 85925 0 0 0 0 0 0 0 IO-APIC-fasteoi ehci_hcd:usb5, ehci_hcd:usb6 40: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 41: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 42: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 43: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 44: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 45: 0 0 0 0 0 0 0 0 PCI-MSI-edge PCIe PME 46: 79853 0 0 0 0 0 0 0 PCI-MSI-edge ahci 48: 1 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 49: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 50: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 51: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 52: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 53: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 54: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 55: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 56: 1 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 57: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 58: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 59: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 60: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 61: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 62: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 63: 0 0 0 0 0 0 0 0 PCI-MSI-edge xhci_hcd 64: 173506 0 0 0 0 0 0 0 PCI-MSI-edge hda_intel NMI: 482 89 25 13 277 24 11 10 Non-maskable interrupts LOC: 783857 194752 114133 70577 372438 179065 117179 162016 Local timer interrupts SPU: 0 0 0 0 0 0 0 0 Spurious interrupts PMI: 482 89 25 13 277 24 11 10 Performance monitoring interrupts IWI: 0 0 0 0 0 0 0 0 IRQ work interrupts RES: 131917 46750 7432 3291 150003 9576 3435 3067 Rescheduling interrupts CAL: 2759 6563 7150 6997 5387 7140 7269 6678 Function call interrupts TLB: 4396 2038 1336 492 5434 1896 1121 606 TLB shootdowns TRM: 0 0 0 0 0 0 0 0 Thermal event interrupts THR: 0 0 0 0 0 0 0 0 Threshold APIC interrupts MCE: 0 0 0 0 0 0 0 0 Machine check exceptions MCP: 37 37 37 37 37 37 37 37 Machine check polls ERR: 0 MIS: 0 Last but not least, right after boot-up those lines are usually present in dmesg: [ 18.367094] hda-intel: IRQ timing workaround is activated for card #1. Suggest a bigger bdl_pos_adj. [ 18.458859] hda-intel: IRQ timing workaround is activated for card #2. Suggest a bigger bdl_pos_adj. I'm not sure if it's related or a symptom of a bigger problem so I'm posting it just in case. I don't really know what other information might be of relevance here. Don't hesitate to ask for more in the comments.

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• Does log4net support zeroconf?

  - by urig

  I've recently checked out Apache Chainsaw as a viewer for my log4net logs. One feature that struck me as interesting is zeroconf: http://logging.apache.org/log4j/companions/zeroconf/apidocs/org/apache/log4j/net/ZeroConfSocketHubAppender.html Does log4net support zeroconf for Apache Chainsaw to consume? Is there a log4net zeroconf appender like the Java ZeroConfSocketHubAppender?

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• Can I configure Apache ActiveMQ to use the STOMP protocol over UDP?

  - by Marc C

  I'm developing a STOMP binding for Ada, which is working fine utilizing TCP/IP as the transport between the client and an ActiveMQ server configured as a STOMP broker. I thought to support UDP as well (i.e. STOMP over UDP), however, the lack of pertinent information in the ActiveMQ documentation or in web searches suggests to me that this isn't possible, and perhaps it doesn't even make any sense :-) Confirmation one way or the other (and an ActiveMQ configuration excerpt if this is possible) would be appreciated.

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• How do i use GraphMLReader2 in Jung?

  - by askus

  I want to use class GraphMLReader to read a Undirected Graph from graphML with JUNG2.0. The code is as follow: import edu.uci.ics.jung.io.*; import edu.uci.ics.jung.io.graphml.*; import java.io.*; import java.util.*; import org.apache.commons.collections15.Transformer; import edu.uci.ics.jung.graph.*; class Vertex{ int id; String type; String value; } class Edge{ int id ; String type; String value; } public class Loader{ static String src = "test.xsl"; public static void Main( String[] args){ Reader reader = new FileReader(src ); Transformer<NodeMetadata, Vertex> vtrans = new Transformer<NodeMetadata,Vertex>(){ public Vertex transform(NodeMetadata nmd ){ Vertex v = new Vertex() ; v.type = nmd.getProperty("type"); v.value = nmd.getProperty("value"); v.id = Integer.valueOf( nmd.getId() ); return v; } }; Transformer<EdgeMetadata, Edge> etrans = new Transformer<EdgeMetadata,Edge>(){ public Edge transform( EdgeMetadata emd ){ Edge e = new Edge() ; e.type = emd.getProperty("type"); e.value = emd.getProperty("value"); e.id = Integer.valueOf( emd.getId() ); return e; } }; Transformer<HyperEdgeMetadata, Edge> hetrans = new Transformer<HyperEdgeMetadata,Edge>(){ public Edge transform( HyperEdgeMetadata emd ){ Edge e = new Edge() ; e.type = emd.getProperty("type"); e.value = emd.getProperty("value"); e.id = Integer.valueOf( emd.getId() ); return e; } }; Transformer< GraphMetadata , UndirectedSparseGraph> gtrans = new Transformer<GraphMetadata,UndirectedSparseGraph>(){ public UndirectedSparseGraph<Vertex,Edge> transform( GraphMetadata gmd ){ return new UndirectedSparseGraph<Vertex,Edge>(); } }; GraphMLReader2< UndirectedSparseGraph<Vertex,Edge> , Vertex , Edge> gmlr = new GraphMLReader2< UndirectedSparseGraph<Vertex,Edge> ,Vertex, Edge>( reader, gtrans, vtrans, etrans, hetrans); UndirectedSparseGraph<Vertex,Edge> g = gmlr.readGraph(); return ; } } However, compiler alert that: Loader.java:60: cannot find symbol symbol : constructor GraphMLReader2(java.io.Reader,org.apache.commons.collections15.Transformer<edu.uci.ics.jung.io.graphml.GraphMetadata,edu.uci.ics.jung.graph.UndirectedSparseGraph>,org.apache.commons.collections15.Transformer<edu.uci.ics.jung.io.graphml.NodeMetadata,Vertex>,org.apache.commons.collections15.Transformer<edu.uci.ics.jung.io.graphml.EdgeMetadata,Edge>) location: class edu.uci.ics.jung.io.graphml.GraphMLReader2<edu.uci.ics.jung.graph.UndirectedSparseGraph<Vertex,Edge>,Vertex,Edge> new GraphMLReader2< UndirectedSparseGraph<Vertex,Edge> ,Vertex, Edge>( ^ 1 error How can i solve this problem? Thanks.

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• Junit (3.8.1) testing that an exception is thrown (works in unit test, fails when added to a testSui

  - by Mike Cargal

  I'm trying to test that I'm throwing an exception when appropriate. In my test class I have a method similar to the following: public void testParseException() { try { ClientEntitySingleton.getInstance(); fail("should have thrown exception."); } catch (RuntimeException re) { assertEquals( "<exception message>", re.getMessage()); } } This works fine (green bar) whenever I run that single unitTest class. However, when I add that test to a testSuite, I get a red bar Unit test failure reported on the exception. One more thing... it works in the testSuite, if it's the first test in the suite. Actually, I'm doing two of these tests and just figured out that if I make them the first two tests in the suite, all is good, but I get this failure if a "regular" test precedes it. So I have a work-around, but no real answer. Any ideas? Heres'a stack trace of the "failure" java.lang.RuntimeException: ProcEntity client dn="Xxxxxx/Xxxx/XXX" is defined multiple times. at com.someco.someprod.clientEntityManagement.ClientEntitySingleton.addClientEntity(ClientEntitySingleton.java:247) at com.someco.someprod.clientEntityManagement.ClientEntitySingleton.startElement(ClientEntitySingleton.java:264) at org.apache.xerces.parsers.AbstractSAXParser.startElement(Unknown Source) at org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanStartElement(Unknown Source) at org.apache.xerces.impl.XMLDocumentFragmentScannerImpl$FragmentContentDispatcher.dispatch(Unknown Source) at org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown Source) at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source) at org.apache.xerces.parsers.XMLParser.parse(Unknown Source) at org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source) at com.someco.someprod.clientEntityManagement.ClientEntitySingleton.parse(ClientEntitySingleton.java:216) at com.someco.someprod.clientEntityManagement.ClientEntitySingleton.reload(ClientEntitySingleton.java:303) at com.someco.someprod.clientEntityManagement.ClientEntitySingleton.setInputSourceProvider(ClientEntitySingleton.java:88) at com.someco.someprod.clientEntityManagement.test.TestClientBase.setUp(TestClientBase.java:17) at com.someco.someprod.clientEntityManagement.test.TestClientEntityDup.setUp(TestClientEntityDup.java:8) at junit.framework.TestCase.runBare(TestCase.java:125) at junit.framework.TestResult$1.protect(TestResult.java:106) at junit.framework.TestResult.runProtected(TestResult.java:124) at junit.framework.TestResult.run(TestResult.java:109) at junit.framework.TestCase.run(TestCase.java:118) at junit.framework.TestSuite.runTest(TestSuite.java:208) at junit.framework.TestSuite.run(TestSuite.java:203) at junit.framework.TestSuite.runTest(TestSuite.java:208) at junit.framework.TestSuite.run(TestSuite.java:203) at org.eclipse.jdt.internal.junit.runner.junit3.JUnit3TestReference.run(JUnit3TestReference.java:128) at org.eclipse.jdt.internal.junit.runner.TestExecution.run(TestExecution.java:38) at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:460) at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.runTests(RemoteTestRunner.java:673) at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.run(RemoteTestRunner.java:386) at org.eclipse.jdt.internal.junit.runner.RemoteTestRunner.main(RemoteTestRunner.java:196)

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• How to build Lucene / Solr from source code in windows environment in order to add patches

  - by Simon

  I have successfully implemented Apache’s Solr for free text searching a database driven web site build for windows platforms using Visual Studio in c#. I am trying to get a version Solr working with field collapsing (which is not in the release version). There are patches available from apache and discussions on the web of people successfully doing this for the version I am using but my problem is cannot get the build to work. I am a c# coder on windows platforms so java development is new to me. I understand I need to get the correct source code (and revision) from SVN, add the appropriate patches, then build the war file to deploy to my system. I cannot seem to get the source to build and produce the deployment code including jar (and subsequent war) files. My system is: Windows 7 Ultimate for development Visual Studio 2010 for c# / javascript development MyEclipse 8.6 / Eclipse 3.5 for the java build from source Subecplise 1.6x SVN plugin to get the source from apache’s SVN Apache Solr 1.4.1 So far I have: Found the right patches for the function I need: https://issues.apache.org/jira/browse/SOLR-236 Specifically I need to patch: field_collapsing_1.1.0.patch HTTPS //issues.apache.org/jira/secure/attachment/12357681/field_collapsing_1.1.0.patch and SOLR-236-1_4_1.patch HTTPS //issues.apache.org/jira/secure/attachment/12448216/SOLR-236-1_4_1.patch I downloaded the Lucene trunk version from the day before the patch was released (revision 958303 from 28/6/10) via subeclipse into a java package in myeclipse from: HTTPS //svn.apache.org/repos/asf/lucene/dev/trunk (Solr is the web implementation of Lucene and is in the subfolder solr/) I can apply patches to the solr directory once it has downloaded but the parent Lucene project doesn’t build the war files, copy the jar or other files into the bin folder (it stays empty). The build process starts, but doesn’t do anything apart from creating the folders bin and src. I am building the whole Lucene project, which contains Solr. I have tried building the source without patching and the same happens. If I copy out the Solr directory into a new project, it runs the build and copies all the related files, tests, etc but fails with 4,500 errors and does not produce the jar files or war file, which I assume is because it can’t find the Lucene trunk files which it depends on. I have two interrelated problems 1) I can't get the Lucene downloaded trunk to build 2) The jar, war and associated files are not created Can anyone help with what I am missing to build the war file? I have spent 2 days to get this far as the help online is extremely patchy and I can’t find a walk though tutorial on building a java war file from source in a windows environment. Any help will be much appreciated. Simon

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• can Apache Maven be set to download jar files from an ftp??

  - by sanre6

  i want maven to download custom jar files from an ftp how to set the path? and is there anyway i can combine dependencies or plugins within one element tag.i dont want to write for each dependency r plugin like importing from one external jars folder btw i am using maven plugin for eclipcse ide thanks

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• Why use Buildr instead of Ant or Maven?

  - by Scott Markwell

  http://buildr.apache.org/ http://ant.apache.org/ http://maven.apache.org/ What does another build tool targeted at Java really get me? Is it so hard to write a plugin using Java versus writing it in Ruby? If you use Buildr over another tool, why? Side question: How many build systems does the Apache foundation need targeted at Java?

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• What is the correct way to handle object which is instance of class in apache.xerces?

  - by Roman

  Preface: I'm working on docx parser for java. docx format is based on xml. When I read document its parts are being unmarshalled (with JAXB). And I get a tree of certain elements based on xml markup. Almost problem: But some elements (which are at very deep xml level) returned not as certain class from docx spec (i.e. CTStyle, CTDrawing, CTInline etc) but as Object. Those objects are indeed instances of xerces classes, e.g. ElementNSImpl. Problem: How should I handle these objects. The simplest approach is: CTGraphicData gData = getGraphicData (); Object obj = gData.getAny().get(0); ElementNSImpl element = (ElementNSImpl)obj; But it doesn't seem to be a good solution. I've never worked with xerces directly. What is the better way to do this casting? (If anyone also give me a tip about right way to iterate through nodes it would be great).

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• How to use Apache ivy to resolve dependency with multiple files?

  - by Alexander

  Here is my ivy.xml: <?xml version="1.0" encoding="UTF-8"?> <ivy-module version="2.0"> ... <dependencies> <dependency org="spring" name="richclient" rev="1.1.0"/> </dependencies> </ivy-module> And ivy-settings.xml: <property name="ivy.local.default.root" value="/home/---/dev/Java/_libraries/_ivy" override="false"/> <property name="ivy.local.default.ivy.pattern" value="[organisation]/[module]/[revision]/[type]s/[artifact].[ext]" override="false"/> <property name="ivy.local.default.artifact.pattern" value="[organisation]/[module]/[revision]/[type]s/[artifact].[ext]" override="false"/> <resolvers> <filesystem name="local"> <ivy pattern="${ivy.local.default.root}/${ivy.local.default.ivy.pattern}" /> <artifact pattern="${ivy.local.default.root}/${ivy.local.default.artifact.pattern}" /> </filesystem> </resolvers> Ivy try to find /home/---/dev/Java/_libraries/_ivy/spring/richclient/1.1.0/jars/richclient.jar And here is the problem. Library has 4 jar files. How to include all jars in project from one dependency in ivy.xml? Thx

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• Performance of Java matrix math libraries?

  - by dfrankow

  We are computing something whose runtime is bound by matrix operations. (Some details below if interested.) This experience prompted the following question: Do folk have experience with the performance of Java libraries for matrix math (e.g., multiply, inverse, etc.)? For example: JAMA: http://math.nist.gov/javanumerics/jama/ COLT: http://acs.lbl.gov/~hoschek/colt/ Apache commons math: http://commons.apache.org/math/ I searched and found nothing. Details of our speed comparison: We are using Intel FORTRAN (ifort (IFORT) 10.1 20070913). We have reimplemented it in Java (1.6) using Apache commons math 1.2 matrix ops, and it agrees to all of its digits of accuracy. (We have reasons for wanting it in Java.) (Java doubles, Fortran real*8). Fortran: 6 minutes, Java 33 minutes, same machine. jvisualm profiling shows much time spent in RealMatrixImpl.{getEntry,isValidCoordinate} (which appear to be gone in unreleased Apache commons math 2.0, but 2.0 is no faster). Fortran is using Atlas BLAS routines (dpotrf, etc.). Obviously this could depend on our code in each language, but we believe most of the time is in equivalent matrix operations. In several other computations that do not involve libraries, Java has not been much slower, and sometimes much faster.

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• RHEL Java Application returns "No space left on device" but only 3% used

  - by FiveO

  My Java Application returns following Exception when saving a new file in /opt/wso2 on a CentOS 6.4: Caused by java.io.FileNotFoundException: ... (No space left on device) Caused by: java.io.FileNotFoundException: /opt/wso2/FrameworkFiles/trk_2014062500042488825_TRCK_PatfallHospis_pFromHospis_66601fb3-a03c-4149-93c3-6892e0a10fea.txt (No space left on device) at java.io.FileOutputStream.open(Native Method) at java.io.FileOutputStream.<init>(FileOutputStream.java:212) at java.io.FileOutputStream.<init>(FileOutputStream.java:99) at com.avintis.esb.framework.adapter.wso2.FrameworkAdapterWSO2.sendMessages(FrameworkAdapterWSO2.java:634) ... 23 more But when I run df -a I can see that the partition still has plenty of space available: [root@stzsi466 wso2]# df -a Filesystem 1K-blocks Used Available Use% Mounted on /dev/mapper/vg_stzsi466-lv_root 12054824 2116092 9326380 19% / proc 0 0 0 - /proc sysfs 0 0 0 - /sys devpts 0 0 0 - /dev/pts tmpfs 4030764 0 4030764 0% /dev/shm /dev/sda1 495844 53858 416386 12% /boot /dev/sdb1 51605436 1424288 47559744 3% /opt/wso2 none 0 0 0 - /proc/sys/fs/binfmt_misc [root@stzsi466 ~]# df -i Filesystem Inodes IUsed IFree IUse% Mounted on /dev/mapper/vg_stzsi466-lv_root 765536 45181 720355 6% / tmpfs 1007691 1 1007690 1% /dev/shm /dev/sda1 128016 44 127972 1% /boot /dev/sdb1 3276800 6137 3270663 1% /opt/wso2 What is the problem here? Is it caused by the Java on CentOS 6.4? I have another server running Redhat REHL 6.4 and all works fine - same Java etc. Does anyone know of this problem?

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• How do I take advantage of Connection Pooling with Apache Active MQ?

  - by ScArcher2

  I'd like to know how to properly use connection pooling with Active MQ. Currently I have a Connection Factory that creates a new connection every time I want to send a message. I'd like to be able to pool Connections so I don't incur the overhead of connecting every time.

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• Perl not closing TCP sockets if clients are no longer connected?

  - by LM

  The purpose of the application is to listen for a specific UDP multicast and then to forward the data to any TCP clients connected to the server. The code works fine, but I have a problem with the sockets not closing after the TCP clients disconnects. A socketsniffer utility shows the the sockets remain open and all the UDP data continues to be forwarded to the clients. The problem I believe is with the "if ($write-connected())" block as it always return true, even if the TCP client is no longer connected. I use standard Windows Telnet to connect to the server and to see the data. When I close telnet, the TCP socket is suppose to close on the server. Any reason why connected() show the connections as active even if they are not? Also, what alternative should I use then? Code: #!/usr/bin/perl use IO::Socket::Multicast; use IO::Socket; use IO::Select; my $tcp_port = "4550"; my $tcp_socket = IO::Socket::INET->new( Listen => SOMAXCONN, LocalAddr => '0.0.0.0', LocalPort => $tcp_port, Proto => 'tcp', ReuseAddr => 1, ); use Socket qw(IPPROTO_TCP TCP_NODELAY); setsockopt( $tcp_socket, IPPROTO_TCP, TCP_NODELAY, 1); use constant GROUP => '239.2.0.81'; use constant PORT => '6550'; my $udp_socket= IO::Socket::Multicast->new(Proto=>'udp',LocalPort=>PORT); $udp_socket->mcast_add(GROUP) || die "Couldn't set group: $!\n"; my $read_select = IO::Select->new(); my $write_select = IO::Select->new(); $read_select->add($tcp_socket); $read_select->add($udp_socket); ## Loop forever, reading data from the UDP socket and writing it to the ## TCP socket(s). while (1) { ## No timeout specified (see docs for IO::Select). This will block until a TCP ## client connects or we have data. my @read = $read_select->can_read(); foreach my $read (@read) { if ($read == $tcp_socket) { ## Handle connect from TCP client. Note that UDP connections are ## stateless (no accept necessary)... my $new_tcp = $read->accept(); $write_select->add($new_tcp); } elsif ($read == $udp_socket) { ## Handle data received from UDP socket... my $recv_buffer; $udp_socket->recv($recv_buffer, 1024, undef); ## Write the data read from UDP out to the TCP client(s). Again, no ## timeout. This will block until a TCP socket is writable. my @write = $write_select->can_write(); foreach my $write (@write) { ## Make sure the socket is still connected before writing. if ($write->connected()) { $write->send($recv_buffer); } else { $write_select->remove($write); close $write; } } } } }

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• How to log the output from cmd tree command using Apache Ant exec task?

  - by S.N

  Hi, I am trying to log the output from cmd tree command using ant with the following: <exec dir="${basedir}" executable="cmd" output="output.txt"> <arg value="tree" /> </exec> However, I am seeing the following in the "output.txt": Microsoft Windows XP [Version 5.1.2600] (C) Copyright 1985-2001 Microsoft Corp. When I run the command in the windows cmd: C:\tree>tree I get something like: C:\tree +---test +---test Can anyone tell me how to write a Ant script to print the tree structure in to a file?

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• How to properly encode "[" and "]" in queries using Apache HttpClient?

  - by Jason Nichols

  I've got a GET method that looks like the following: GetMethod method = new GetMethod("http://host/path/?key=[\"item\",\"item\"]"); Such a path works just fine when typed directly into a browser, but the above line when run causes an IllegalArgumentException : Invalid URI. I've looked at using the URIUtils class, but without success. Is there a way to automatically encode this (or to add a query string onto the URL without causing HttpClient to barf?).

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• Opscenter repair service times out. ERROR: Requested range intersects a local range [...]

  - by jlemire-zs

  My production cluster had the repair service enabled since april 16th with the default 9 days time to completion and repairs would complete properly. However, since may 22nd, it is being disabled automatically by Opscenter: From /var/log/opscenter/opscenterd.log: [...] 2014-06-03 21:13:47-0400 [zs_prod] ERROR: Repair task (<Node 10.1.0.22='6417880425364517165'>, (-4019838962446882275L, -4006140687792135587L), set(['zs_logging', 'OpsCenter'])) timed out after 3600 seconds. 2014-06-03 22:16:44-0400 [zs_prod] ERROR: Repair task (<Node 10.1.0.22='6417880425364517165'>, (-4006140687792135587L, -4006140687792135586L), set(['zs_logging', 'OpsCenter'])) timed out after 3600 seconds. 2014-06-03 22:16:44-0400 [zs_prod] ERROR: More than 100 errors during repair service, shutting down repair service 2014-06-03 22:16:44-0400 [zs_prod] INFO: Stopping repair service [...] From /var/log/opscenter/repair_service/zs_prod.log: [...] 2014-06-03 22:16:44-0400 [zs_prod] ERROR: Repair task (<Node 10.1.0.22='6417880425364517165'>, (-4006140687792135587L, -4006140687792135586L), set(['zs_logging', 'OpsCenter'])) timed out after 3600 seconds. 2014-06-03 22:16:44-0400 [zs_prod] ERROR: Task (<Node 10.1.0.22='6417880425364517165'>, (-4006140687792135587L, -4006140687792135586L), set(['zs_logging', 'OpsCenter'])) has failed 1 times. 2014-06-03 22:16:44-0400 [zs_prod] ERROR: 101 errors have ocurred out of 100 allowed. 2014-06-03 22:16:44-0400 [zs_prod] ERROR: More than 100 errors during repair service, shutting down repair service 2014-06-03 22:16:44-0400 [zs_prod] INFO: Stopping repair service On the nodes on which the repair fails, from /var/log/cassandra/system.log: ERROR [RMI TCP Connection(93502)-10.1.0.22] 2014-06-03 20:12:28,858 StorageService.java (line 2560) Repair session failed: java.lang.IllegalArgumentException: Requested range intersects a local range but is not fully contained in one; this would lead to i mprecise repair at org.apache.cassandra.service.ActiveRepairService.getNeighbors(ActiveRepairService.java:164) at org.apache.cassandra.repair.RepairSession.<init>(RepairSession.java:128) at org.apache.cassandra.repair.RepairSession.<init>(RepairSession.java:117) at org.apache.cassandra.service.ActiveRepairService.submitRepairSession(ActiveRepairService.java:97) at org.apache.cassandra.service.StorageService.forceKeyspaceRepair(StorageService.java:2620) at org.apache.cassandra.service.StorageService$5.runMayThrow(StorageService.java:2556) at org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28) These errors, which only occurs if the repair service is running, are the only errors these nodes experience. Outside of the repair task, the Cassandra cluster works perfectly. I am running Opscenter 4.1.2 with a 6 nodes DSE 4.0.2 cluster installed on linux virtual machines. The nodes run a vanilla installation of Ubuntu Server 12.04 64-bit and DSE was installed and secured according to the provided installation documentation. I have been experiencing that problem on my development cluster for a while too (with DSE 4.0.0, 4.0.1 and 4.0.2), but I thought this was because of some configuration error on my part. The problem has appeared spontaneously at some point too. The Cassandra cluster has been working very smoothly with a good write throughput. It is very stable and has enough resources to work with. We did not notice any problems with the applications that depend on it.

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• Is there a way with Apache Ant to update a jar file after it's been built?

  - by predhme

  Is there a way to update a jar file in ANT? EDIT: For example, if I wanted to add some additional files to an already existing JAR file?

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• Will spreading your servers load not just consume more recourses

  - by Saif Bechan

  I am running a heavy real-time updating website. The amount of recourses needed per user are quite high, ill give you an example. Setup Every visit The application is php/mysql so on every visit static and dynamic content is loaded. Recourses: apache,php,mysql Every second (no more than a second will just be too long) The website needs to be updated real-time so every second there is an ajax call thats updates the website. Recourses: jQuery,apache,php,mysql Avarage spending for single user (spending one minute and visited 3 pages) Apache: +/- 63 requests / responsess serving static and dynamic content (img,css,js,html) php: +/- 63 requests / responses mysql: +/- 63 requests / responses jquery: +/- 60 requests / responses Optimization I want to optimize this process, but I think that maybe it would be just the same in the end. Before implementing and testing (which will take weeks) I wanted to have some second opinions from you guys. Every visit I want to start off with having nginx in the front and work as a proxy to deliver the static content. Recources: Dynamic: apache,php,mysql Static: nginx This will spread the load on apache a lot. Every Second For the script that loads every second I want to set up Node.js server side javascript with nginx in te front. I want to set it up that jquery makes a request ones a minute, and node.js streams the data to the client every second. Recources: jQuery,nginx,node.js,mysql Avarage spending for single user (spending one minute and visited 3 pages) Nginx: 4 requests / responsess serving mostly static conetent(img,css,js) Apache: 3 requests only the pages php: 3 requests only the pages node.js: 1 request / 60 responses jquery: 1 request / 60 responses mysql: 63 requests / responses Optimization As you can see in the optimisation the load from Apache and PHP are lifted and places on nginx and node.js. These are known for there light footprint and good performance. But I am having my doubts, because there are still 2 programs extra loaded in the memory and they consume cpu. So it it better to have less programs that do the job, or more. Before I am going to spend a lot of time setting this up I would like to know if it will be worth the while.

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• URL/Apache redirection question. (domain+directory redirect to sudomain)

  - by furstgurshnur

  Hello, I have been trying to figure this out for about 2 hours now. A new requirement came up where it was asked of me to try to find a way to send requests from foo.bar.com/blah to blah.bar.com. Technically /blah doesn't exist, but I was hoping to have the server redirect before it gets to that point. Has anyone had to do this before? What was the solution?

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• Replicated filesystem and EC2 MySQL

  - by El Yobo

  I'm currently investigating migrating our infrastructure over to run on Amazon's EC2 and am trying to figure out the best way to set up a MySQL service. I'm leaning towards running our own MySQL instances, rather than going with Amazon's RDS, but am still considering the best approach for performance and cost on the instance itself. In order to have persistent data, the MySQL data needs to be on an EBS volume (with some form of striped RAID, e.g. RAID0 or RAID10) to improve persistence. However, EBS IO is limited by the network interface (gigabit, so a theoretical maximum of 128 MB/s), while the ephemeral volumes have no such problem. I did see a suggestion for running two MySQL servers on an instance, with a master running on the ephemeral disk (which we would also RAID) and a slave storing changes to an EBS volume, but this has some additional overhead and complexity (two servers). What I was imagining is using some form of replicated file system such that I could have a filesystem on top of a RAID0 of ephemeral volumes to maximise performance all changes from the above immediately replicated to another RAID1 volume backed by multiple EBS volumes to ensure no data loss The advantages of this would be best possible IO performance for the DB server; no network delay in IO decreased IO on EBS volumes (as all read IO will be done on the ephemeral volumes) so decreased cost good data security, as it's backed onto redundant EBS volumes However, I haven't seen an appropriate system to replicate all changes from one volume to the other; is there a filesystem, or any other approach, which will do this? The distributed file systems, e.g. GlusterFS, DRBD etc seem to focus on replicating disks between servers, can they be set up to do what I'm interested in here? I also haven't seen anything about other's taking this approach. Do I have a solution in need of a problem here (i.e. is performance good enough, so this whole idea is redundant)? Is there some flaw in the plan?

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• [Apache] .htaccess rule to redirect 'domain.tld.' to 'domain.tld'

  - by Voyagerfan5761

  I've scoured Google and this site pretty extensively, and I must be missing something. None of the suggestions I've found worked. The problem is simple. I have links coming in to my site using http://domain.name./ but I want all visitors redirected to http://domain.name/ without the trailing dot. How can I do that?

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