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• Is there an extensible SQL like query language that is safe for exposing via a public API?

  - by Lokkju

  I want to expose some spatial (and a few non-spatial) datasets via a public API. The backend store will either be PostgreSQL/PostGIS, sqlite/spatialite, or CouchDB/GeoCouch. My goal is to find a some, preferably standard, way to allow people to make complex spatial queries against the data. I would like it to be a simple GET based request. The idea is to allow safe SQL type queries, without allowing unsafe ones. I would rather modify something that is off the shelf than doing the entire thing myself. I specifically want to support requesting specific fields from a table; joining results; and spatial functions that are already implemented by the underlying datastore. Ideas anyone?

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• What is "rfcTextOfMessage" value? : Google Apps Email Migration API Developer's Guide

  - by Pari

  I am using Google API to test below code: MailItemService mailItemService = new MailItemService(domain, "Sample Migration Application"); mailItemService.setUserCredentials(userEmail, password); MailItemEntry entry = new MailItemEntry(); entry.Rfc822Msg = new Rfc822MsgElement(rfcTextOfMessage); Referring to this Link . I used Sample Value given for "rfcTextOfMessage". But how to change To,Send and Date values for different mails? Is there any way to get this format? Note: I am using C#

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• How to install pip/easy_install on debian 6 for python3.2

  - by atomAltera

  I'm trying to install pip or setup tools form python 3.2 in debian 6. First case: apt-get install python3-pip...OK python3 easy_install.py webob Searching for webob Reading http://pypi.python.org/simple/webob/ Reading http://webob.org/ Reading http://pythonpaste.org/webob/ Best match: WebOb 1.2.2 Downloading http://pypi.python.org/packages/source/W/WebOb/WebOb-1.2.2.zip#md5=de0f371b46554709ce5b93c088a11cae Processing WebOb-1.2.2.zip Traceback (most recent call last): File "easy_install.py", line 5, in <module> main() File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1931, in main with_ei_usage(lambda: File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1912, in with_ei_usage return f() File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 1935, in <lambda> distclass=DistributionWithoutHelpCommands, **kw File "/usr/local/lib/python3.2/distutils/core.py", line 148, in setup dist.run_commands() File "/usr/local/lib/python3.2/distutils/dist.py", line 917, in run_commands self.run_command(cmd) File "/usr/local/lib/python3.2/distutils/dist.py", line 936, in run_command cmd_obj.run() File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 368, in run self.easy_install(spec, not self.no_deps) File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 608, in easy_install return self.install_item(spec, dist.location, tmpdir, deps) File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 638, in install_item dists = self.install_eggs(spec, download, tmpdir) File "/usr/lib/python3/dist-packages/setuptools/command/easy_install.py", line 799, in install_eggs unpack_archive(dist_filename, tmpdir, self.unpack_progress) File "/usr/lib/python3/dist-packages/setuptools/archive_util.py", line 67, in unpack_archive driver(filename, extract_dir, progress_filter) File "/usr/lib/python3/dist-packages/setuptools/archive_util.py", line 154, in unpack_zipfile data = z.read(info.filename) File "/usr/local/lib/python3.2/zipfile.py", line 891, in read with self.open(name, "r", pwd) as fp: File "/usr/local/lib/python3.2/zipfile.py", line 980, in open close_fileobj=not self._filePassed) File "/usr/local/lib/python3.2/zipfile.py", line 489, in __init__ self._decompressor = zlib.decompressobj(-15) AttributeError: 'NoneType' object has no attribute 'decompressobj' Second case: from http://pypi.python.org/pypi/distribute#installation-instructions python3 distribute_setup.py Downloading http://pypi.python.org/packages/source/d/distribute/distribute-0.6.28.tar.gz Extracting in /tmp/tmpv6iei2 Traceback (most recent call last): File "distribute_setup.py", line 515, in <module> main(sys.argv[1:]) File "distribute_setup.py", line 511, in main _install(tarball, _build_install_args(argv)) File "distribute_setup.py", line 73, in _install tar = tarfile.open(tarball) File "/usr/local/lib/python3.2/tarfile.py", line 1746, in open raise ReadError("file could not be opened successfully") tarfile.ReadError: file could not be opened successfully Third case: from http://pypi.python.org/pypi/distribute#installation-instructions tar -xzvf distribute-0.6.28.tar.gz cd distribute-0.6.28 python3 setup.py install Before install bootstrap. Scanning installed packages No setuptools distribution found running install running bdist_egg running egg_info writing distribute.egg-info/PKG-INFO writing top-level names to distribute.egg-info/top_level.txt writing dependency_links to distribute.egg-info/dependency_links.txt writing entry points to distribute.egg-info/entry_points.txt reading manifest file 'distribute.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'distribute.egg-info/SOURCES.txt' installing library code to build/bdist.linux-x86_64/egg running install_lib running build_py copying distribute.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO copying distribute.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying distribute.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying distribute.egg-info/entry_points.txt -> build/bdist.linux-x86_64/egg/EGG-INFO copying distribute.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO creating 'dist/distribute-0.6.28-py3.2.egg' and adding 'build/bdist.linux-x86_64/egg' to it Traceback (most recent call last): File "setup.py", line 220, in <module> scripts = scripts, File "/usr/local/lib/python3.2/distutils/core.py", line 148, in setup dist.run_commands() File "/usr/local/lib/python3.2/distutils/dist.py", line 917, in run_commands self.run_command(cmd) File "/usr/local/lib/python3.2/distutils/dist.py", line 936, in run_command cmd_obj.run() File "build/src/setuptools/command/install.py", line 73, in run self.do_egg_install() File "build/src/setuptools/command/install.py", line 93, in do_egg_install self.run_command('bdist_egg') File "/usr/local/lib/python3.2/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/usr/local/lib/python3.2/distutils/dist.py", line 936, in run_command cmd_obj.run() File "build/src/setuptools/command/bdist_egg.py", line 241, in run dry_run=self.dry_run, mode=self.gen_header()) File "build/src/setuptools/command/bdist_egg.py", line 542, in make_zipfile z = zipfile.ZipFile(zip_filename, mode, compression=compression) File "/usr/local/lib/python3.2/zipfile.py", line 689, in __init__ "Compression requires the (missing) zlib module") RuntimeError: Compression requires the (missing) zlib module zlib1g-dev installed Help me please

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• Problem with urllib

  - by Eva

  I wrote this code: import urllib proxies = {'http': 'http://112.65.135.54:8080/'} opener = urllib.FancyURLopener(proxies) r = opener.open("http://www.python.org/") print r.read() and when I execute it this program works fine, and send for me source code of python.org But when i use this: import urllib proxies = {'http': 'http://80.176.245.196:1080/'} opener = urllib.FancyURLopener(proxies) r = opener.open("http://www.python.org/") print r.read() this program does not send me the source code of python.org What am I going to do?

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• A python random function acts differently when assigned to a list or called directly...

  - by Dror Hilman

  I have a python function that randomize a dictionary representing a position specific scoring matrix. for example: mat = { 'A' : [ 0.53, 0.66, 0.67, 0.05, 0.01, 0.86, 0.03, 0.97, 0.33, 0.41, 0.26 ] 'C' : [ 0.14, 0.04, 0.13, 0.92, 0.99, 0.04, 0.94, 0.00, 0.07, 0.23, 0.35 ] 'T' : [ 0.25, 0.07, 0.01, 0.01, 0.00, 0.04, 0.00, 0.03, 0.06, 0.12, 0.14 ] 'G' : [ 0.08, 0.23, 0.20, 0.02, 0.00, 0.06, 0.04, 0.00, 0.54, 0.24, 0.25 ] } The scambling function: def scramble_matrix(matrix, iterations): mat_len = len(matrix["A"]) pos1 = pos2 = 0 for count in range(iterations): pos1,pos2 = random.sample(range(mat_len), 2) #suffle the matrix: for nuc in matrix.keys(): matrix[nuc][pos1],matrix[nuc][pos2] = matrix[nuc][pos2],matrix[nuc][pos1] return matrix def print_matrix(matrix): for nuc in matrix.keys(): print nuc+"[", for count in matrix[nuc]: print "%.2f"%count, print "]" now to the problem... When I try to scramble a matrix directly, It's works fine: print_matrix(mat) print "" print_matrix(scramble_matrix(mat,10)) gives: A[ 0.53 0.66 0.67 0.05 0.01 0.86 0.03 0.97 0.33 0.41 0.26 ] C[ 0.14 0.04 0.13 0.92 0.99 0.04 0.94 0.00 0.07 0.23 0.35 ] T[ 0.25 0.07 0.01 0.01 0.00 0.04 0.00 0.03 0.06 0.12 0.14 ] G[ 0.08 0.23 0.20 0.02 0.00 0.06 0.04 0.00 0.54 0.24 0.25 ] A[ 0.41 0.97 0.03 0.86 0.53 0.66 0.33.05 0.67 0.26 0.01 ] C[ 0.23 0.00 0.94 0.04 0.14 0.04 0.07 0.92 0.13 0.35 0.99 ] T[ 0.12 0.03 0.00 0.04 0.25 0.07 0.06 0.01 0.01 0.14 0.00 ] G[ 0.24 0.00 0.04 0.06 0.08 0.23 0.54 0.02 0.20 0.25 0.00 ] but when I try to assign this scrambling to a list , it does not work!!! ... print_matrix(mat) s=[] for x in range(3): s.append(scramble_matrix(mat,10)) for matrix in s: print "" print_matrix(matrix) result: A[ 0.53 0.66 0.67 0.05 0.01 0.86 0.03 0.97 0.33 0.41 0.26 ] C[ 0.14 0.04 0.13 0.92 0.99 0.04 0.94 0.00 0.07 0.23 0.35 ] T[ 0.25 0.07 0.01 0.01 0.00 0.04 0.00 0.03 0.06 0.12 0.14 ] G[ 0.08 0.23 0.20 0.02 0.00 0.06 0.04 0.00 0.54 0.24 0.25 ] A[ 0.01 0.66 0.97 0.67 0.03 0.05 0.33 0.53 0.26 0.41 0.86 ] C[ 0.99 0.04 0.00 0.13 0.94 0.92 0.07 0.14 0.35 0.23 0.04 ] T[ 0.00 0.07 0.03 0.01 0.00 0.01 0.06 0.25 0.14 0.12 0.04 ] G[ 0.00 0.23 0.00 0.20 0.04 0.02 0.54 0.08 0.25 0.24 0.06 ] A[ 0.01 0.66 0.97 0.67 0.03 0.05 0.33 0.53 0.26 0.41 0.86 ] C[ 0.99 0.04 0.00 0.13 0.94 0.92 0.07 0.14 0.35 0.23 0.04 ] T[ 0.00 0.07 0.03 0.01 0.00 0.01 0.06 0.25 0.14 0.12 0.04 ] G[ 0.00 0.23 0.00 0.20 0.04 0.02 0.54 0.08 0.25 0.24 0.06 ] A[ 0.01 0.66 0.97 0.67 0.03 0.05 0.33 0.53 0.26 0.41 0.86 ] C[ 0.99 0.04 0.00 0.13 0.94 0.92 0.07 0.14 0.35 0.23 0.04 ] T[ 0.00 0.07 0.03 0.01 0.00 0.01 0.06 0.25 0.14 0.12 0.04 ] G[ 0.00 0.23 0.00 0.20 0.04 0.02 0.54 0.08 0.25 0.24 0.06 ] What is the problem??? Why the scrambling do not work after the first time, and all the list filled with the same matrix?!

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• How do I create a list or set object in a class in Python?

  - by Az

  For my project, the role of the Lecturer (defined as a class) is to offer projects to students. Project itself is also a class. I have some global dictionaries, keyed by the unique numeric id's for lecturers and projects that map to objects. Thus for the "lecturers" dictionary (currently): lecturer[id] = Lecturer(lec_name, lec_id, max_students) I'm currently reading in a white-space delimited text file that has been generated from a database. I have no direct access to the database so I haven't much say on how the file is formatted. Here's a fictionalised snippet that shows how the text file is structured. Please pardon the cheesiness. 0001 001 "Miyamoto, S." "Even Newer Super Mario Bros" 0002 001 "Miyamoto, S." "Legend of Zelda: Skies of Hyrule" 0003 002 "Molyneux, P." "Project Milo" 0004 002 "Molyneux, P." "Fable III" 0005 003 "Blow, J." "Ponytail" The structure of each line is basically proj_id, lec_id, lec_name, proj_name. Now, I'm currently reading the relevant data into the relevant objects. Thus, proj_id is stored in class Project whereas lec_name is a class Lecturer object, et al. The Lecturer and Project classes are not currently related. However, as I read in each line from the text file, for that line, I wish to read in the project offered by the lecturer into the Lecturer class; I'm already reading the proj_id into the Project class. I'd like to create an object in Lecturer called offered_proj which should be a set or list of the projects offered by that lecturer. Thus whenever, for a line, I read in a new project under the same lec_id, offered_proj will be updated with that project. If I wanted to get display a list of projects offered by a lecturer I'd ideally just want to use print lecturers[lec_id].offered_proj. My Python isn't great and I'd appreciate it if someone could show me a way to do that. I'm not sure if it's better as a set or a list, as well. Update After the advice from Alex Martelli and Oddthinking I went back and made some changes and tried to print the results. Here's the code snippet: for line in csv_file: proj_id = int(line[0]) lec_id = int(line[1]) lec_name = line[2] proj_name = line[3] projects[proj_id] = Project(proj_id, proj_name) lecturers[lec_id] = Lecturer(lec_id, lec_name) if lec_id in lecturers.keys(): lecturers[lec_id].offered_proj.add(proj_id) print lec_id, lecturers[lec_id].offered_proj The print lecturers[lec_id].offered_proj line prints the following output: 001 set([0001]) 001 set([0002]) 002 set([0003]) 002 set([0004]) 003 set([0005]) It basically feels like the set is being over-written or somesuch. So if I try to print for a specific lecturer print lec_id, lecturers[001].offered_proj all I get is the last the proj_id that has been read in.

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• Google Street View API v3 : how can I avoid having "fish-eye" effect on Firefox?

  - by Benj

  I'm using google maps API V3 and I'm having trouble displaying correctly the street view within Firefox. I always get the "fish-eye" view (does not happen with Google chrome). So I assumed that the problem came from Firefox. I took a look to the street view options but found nothing. I would like to know if there is an option to have a flatten street view or if it is because Firefox does not support this kind of feature. If someone could explain it to me, I would be grateful. Below, what it looks in Firefox : And what it looks in Chrome :

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• goo.gl Api: How to know if URL was added to user's history?

  - by Manuel

  I'm using the goo.gl API as described here. It's easy to use and it works with or without authantication (I'm using OAuth). So, if I provide the OAuth token / secret, the shortened URL is added to the users history. My problem is, that I would like to show to the user that the shortened URL was added to his goo.gl history. The respone you get from the shortening request, however, is always the same, whether you use authorization or not: { "kind": "urlshortener#url", "id": "http://goo.gl/fbsS", "longUrl": "http://www.google.com/" } So, does anyone know a way to find out, if the shortened URL was successfully added to the user's history? Is there a parameter you can add to the request URL that leads to a more detailed result string?

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• Setting post tags in wordpress via XMLRPC API when submitting a post?

  - by aviv

  Hi, I am trying to use WordPress API via XMLRPC to submit new posts. But i can't set the post tags (nor the categories). echo "Adding $term to blog via XMLRPC ..."; $client = new IXR_Client("http://$blog.wordpress.com/xmlrpc.php"); $content = array('title'=>$term, 'description'=>"All about $term", 'category'=>'barvaz,moshe', 'tags'=>'tag1,tag2'); $client->query('metaWeblog.newPost', 0, $username, $password, $content, true); $rv = $client->getResponse(); print_r($rv); Any idea?

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• How can I tag a user in a photo using the Facebook Graph API?

  - by fr6

  I tried: $args = array( 'access_token' => $access_token, 'id' => $uid ); $url = "https://graph.facebook.com/{$idPhoto}/tags"; $ch = curl_init(); curl_setopt($ch, CURLOPT_URL, $url); curl_setopt($ch, CURLOPT_HEADER, false); curl_setopt($ch, CURLOPT_RETURNTRANSFER, true); curl_setopt($ch, CURLOPT_POST, true); curl_setopt($ch, CURLOPT_POSTFIELDS, $args); curl_setopt($ch, CURLOPT_SSL_VERIFYPEER, false); curl_setopt($ch, CURLOPT_SSL_VERIFYHOST, 2); $data = curl_exec($ch); It has returned me: {"error":{"type":"QueryParseException","message":"Unknown path components: \/tags"}} It does not seem possible because its not in the Facebook documentation: http://developers.facebook.com/docs/api#publishing Can someone confirm me that it's not possible to tag a user in a recently uploaded photo?

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• Facebook Graph API: Feed publishing showing up as link type instead of status?

  - by Redth

  So I'm publishing to a Facebook Group's Feed in my app, using the Graph API. It works fine, except facebook keeps treating the published info as a 'link' feed item type instead of 'status' like it does when I enter the same from facebook's site. eg: string url = "https://graph.facebook.com/<id-of-group/feed?access_token=<access-token>"; string data = "message=hello"; webClient.UploadString(url, "POST", data); Now when I pull the feed items, the json that is returned has "item":"link", with "link":"http://www.facebook.com", whereas I'd expect it to be "item":"status" and no or an empty "link" property. Any ideas?

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• A couple of questions about the encoding of a mail message in GAE Python API?

  - by Ivan

  I've noticed that dev_appserver inbound mail tab now encodes the email body to base64. Why the change? How can I detect what the encoding of the message is?

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• Java: Best practices for turning foreign horror-code into clean API...?

  - by java.is.for.desktop

  Hello, everyone! I have a project (related to graph algorithms). It is written by someone else. The code is horrible: public fields, no getters/setters huge methods, all public some classes have over 20 fields some classes have over 5 constructors (which are also huge) some of those constructors just left many fields null (so I can't make some fields final, because then every second constructor signals errors) methods and classes rely on each other in both directions I have to rewrite this into a clean and understandable API. Problem is: I myself don't understand anything in this code. Please give me hints on analyzing and understanding such code. I was thinking, perhaps, there are tools which perform static code analysis and give me call graphs and things like this.

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• How to upload a picture for an event using the Facebook Graph API?

  - by Thorarin

  I would like to know how to add a picture to an event using the Facebook Graph API. I have seen this question and tried some variations on that theme, without any success. The official documentation doesn't seem to make any mention of it. I'm using PHP for this particular project and I've looked at the PHP SDK source code, which is not helpful in any way. Requesting metadata for pictures using https://graph.facebook.com/eventid/picture?metadata=1&access_token... doesn't seem to be recognized, so no help there either. Has anyone come across some example or documentation on how to do this? (don't care about which language it is in)

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• What is a reasonly priced map API solution for a startup?

  - by Kevin

  I've been developing my application with Google Maps and the wonderful rails plugin for it, expecting to find that when I put my app into production that the commercial licensing wouldn't be too expensive. Then I found out it cost $10,000/year, no exceptions so far. http://www.47hats.com/2009/07/google-maps-the-10k-gotcha/ That's not a terrible price to pay for unlimited usage when your site becomes successful, but for those of us trying to build something from the ground up, that's a hefty price to pay. I've looked at Bing and Yahoo but they're very wishy-washy with what ballpark the pricing is. That on top of the fact I have to ditch my nice rails plugin YM4R for Google maps... Is anyone out there using a map API solution that doesn't cost an arm and a leg to get started with in a commercial aspect? I don't mind not using a plugin, I just need something that will work and is cost affordable in the beginning.

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• Is there a more up to date RSS feed API for Python than Feedparser?

  - by Rhubarb

  Seems it hasn't been updated in a while, and lacks support for things like sy:updateFrequency.

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• Where to start with Google Reader as an API?

  - by EAMann

  I want to build a widget for WordPress that simultaneously displays my latest Google Reader items on the front page and allows for management from behind the WordPress dashboard. I can already add my "shared" items using code I've found in various Google searches, but that's not exactly what I'm looking for. I like the functionality of the Google Reader widget in iGoogle, and I want to replicate that on the WordPress dashboard and build a read-only version for the WordPress front-end. Where do I start in the API (public or 'unofficial') to get this built?

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• Passing Auth to API calls with Web Service References

  - by coffeeaddict

  I am new to web services. The last time I dealt with SOAP was when I created a bunch of wrapper classes that sent requests and received responses back per some response objects/classes I had created. So I had an object to send certain API requests and likewise a set of objects to hold the response back as an object so I could utilize that 3rd party API. Then someone came to me and said why not just use the wsdl and a web service. Ok, so today I went and created a "Service Reference". I see that this is what's called a "Proxy Class". You just instantiate an instance of this and then walla you have access to all the methods from the wsdl. But this leaves me with auth questions. Back when I created my own classes manually, I had a class which exposed properties that I would set then access for things like signature, username, password that got sent along with the Http request that were required by whatever 3rd party API I was using to make API calls. But then with using a Service Reference, how then would I pass this information just like I had done in my custom classes? For instance I'm going to be working with the PayPal API. It requires you to send a signature and a few other pieces of information like username and password. // Determins if API call needs to use a session based URI string requestURI = UseAuthURI == true ? _requestURIAuthBased + aSessionID : _requestURI; byte[] data = XmlUtil.DocumentToBytes(doc); // Create the atual Request instance HttpWebRequest request = CreateWebRequest(requestURI, data.Length); So how do I pass username, password, signature, etc. when using web service references for each method call? Is it as simple as specifying it as a param to the method or do you use the .Credentials and .URL methods of your proxy class object? It seems to me Credentials means windows credentials but I could be wrong. Is it limited to that or can you use that to specify those required header values that PayPal expects with each method call/API request?

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• Should my internal API classes be all in one package?

  - by Chris

  I'm hard at work packaging up an API for public consumption. As such I'm trying to limit the methods that are exposed to only those that I wish to be public and supportable. Underneath this of course there are a multitude of limited access methods. The trouble is that I have a lot of internal code that needs to access these restricted methods without making those methods public. This creates two issues: I can't create interfaces to communicate between classes as this would make these my internal methods public. I can't access protected or default methods unless I put the majority of my internal classes in the same package. So, I have around 70 or 80 internal classes in cleanly segregated packages BUT with overly permissive access modifiers. Would you say that a single package is the lesser of two evils or is there a better way to be able to mask my internal methods whilst keeping more granular packages? I'd be interested to find out the best practice here. I'm already aware of This

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• Google Maps API v3... non-mobile?

  - by andrhamm

  I'm trying to make a Google Maps widget for my website but all of the examples are for full-screen mobile devices. The tutorials work when I copy paste them exactly as shown but they don't seem to work when I want them to only occupy a portion of the page. From what I've read, the v3 is the best API yet (for what I need) because of its speed and compatibility with mobile devices. I plan to make a widget very similar to the MarkerClusterer example from the demo gallery but I can't get it working. Is this a common issue? I know I'm being vague but I would appreciate some help. Thanks

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• How can I find the nearest intersection via the Google Maps API?

  - by dusoft

  How can I find the closest intersection of the street I have coordinates of? For instance, say I have street A running from south to north that is crossed by street X on the north and by street Y on the south. Does the Google Maps API allow for finding coordinates of the nearest crossroad (either X or Y) of street A? I couldn't find it mentioned anywhere. PS: The only solution I am aware of is to guess the lowest number and the highest number of building on the street A and to draw polyline between them. I am not sure about this though.

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• Should I uniform different API calls to a single format before caching?

  - by bluedaniel

  The problem is that I am recreating the social media widget/icons on http://about.me/bluedaniel (thats me). Anyhow there can be up to 6 or 7 different API calls on the page and obviously I am caching them, at the moment with Memcached. The question is, as they arrive in various formats and sizes (fb-json, linkedin-xml, wordpress-rss etc), should I universally format/convert them before storing it in the cache. At present I have recreated the html widget and then stored that, but I worry about saving huge blocks of html in the cache as it doesn't seem that smart.

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• Parse large XML file w/ script or use BioPython API ?

  - by jeremy04

  Hey guys this is my first question on here. I'm trying to make a local copy of the UniprotKB in SQL. The UniprotKB is 2.1GB, and it comes in XML and a special text format used by SwissProt Here are my options: 1) Use a SAX parser (XML) - I chose Ruby, and Nokogiri. I started writing the parser, but my initial reaction: how would I map the XML schema to the SAX parser? 2) BioPython - I already have BioSQL/Biopython installed, which literally created my SQL schema for me, and I was able to successfully insert one SwissProt/Uniprot txt file into the database. I'm running it right now (crosses fingers) on the entire 2.1gb. Here is the code I'm running: from Bio import SeqIO from BioSQL import BioSeqDatabase from Bio import SwissProt server = BioSeqDatabase.open_database(driver = "MySQLdb", user = "root", passwd = "", host="localhost", db = "bioseqdb") db = server["uniprot"] iterator = SeqIO.parse(open("/path/to/uniprot_sprot.dat", "r"), "swiss") db.load(iterator) server.commit() Edit: it's now crashing because the transactions are getting locked (since the tables are Innodb) Error Number: 1205 Lock wait timeout exceeded; try restarting transaction. I'm using MySQL version: 5.1.43 Should I switch my database to Postgrelsql ?

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• When using the Facebook Connect Actionscript API (no JS, just straight Flash), how can I listen for

  - by techno

  Hey guys, When using the Facebook Connect AS API, the user will be prompted to log in to FB in a pop up window. At this point I want to block interaction in my flash movie and wait for them to complete logging in (or potentially close/cancel and not log in). I have seen examples where people put up a Flex "Alert" box with some hint like "Press ok once you have logged into facebook", but I want to automatically listen for them logging in or canceling/closing the popup window without logging in. Is there an event I can listen for with flash? So far I am using ZERO javascript, but I guess I could add a little if it is needed for this... I definitely want to avoid having some sort of "Press OK" alert box, but instead have the flash application automatically react to the user logging in with the popup window.

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• How to ensure YouTube API only returns videos that are playable on iPhone?

  - by prendio2

  I'm building some YouTube search functionality into an iPhone app and want to ensure that I only receive results that will be playable on the device. According to the Searching for videos section in the API reference doc this seems to be relatively straightforward: The format parameter specifies that videos must be available in a particular video format. Your request can specify any of the following formats: I've currently set my project to only return videos with "format=1" which will limit to: RTSP streaming URL for mobile video playback. H.263 video (up to 176x144) and AMR audio. I'd love if someone could confirm that this is in fact the appropriate setting or let me know if I'm missing something. Cheers.

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