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• 50 sequences in one line

  - by user343934

  I have alignment file and long record in it. Suppose while displaying to an end user i want to show Sequence ID and 50 sequences in each line and continue further till the end of file. Can anyone suggest me algorithm or example code in python. Thanks in advance

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• Is PyOpenGL a good place to start learning opengl programing?

  - by Isaiah

  I want to start learning OpenGL but I don't really want to have to learn another language to do it. I already am pretty proficient in python and enjoy the language. I just want to know how close it is to the regular api? Will I be able to pretty easily follow tutorials and books without too much trouble? I know C++ gives better performance, but for just learning can I go wrong with PyOpenGL? Thanks alot

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• What is the best method to remove duplicate image files from your computer

  - by BioGeek

  I have a lot of duplicate image files on my Windows computer, in different subfolders and with different filenames. What Python script or freeware program would you recommend for removing the duplictes? (I've read this similar question, but the poster there is asking about visual duplicates with differing filesizes. Mine are exact duplicates with different filenames.)

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• Image resizing web service

  - by gwik.

  Does someone know a good web service to resize images ? Either an open source (PHP/Python/Ruby) application, or a company providing a web service api.

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• Resize images in directory

  - by Eef

  Hey, I have a directory full of images that I would like to resize to around 60% of their original size. How would I go about doing this? Can be in either Python or Perl Cheers Eef

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• how to write nslookup programmatically?

  - by Jian Lin

  instead of using exec in our script to do an nslookup, is there an easy way to write it programmatically in PHP, Python, or Ruby?

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• Pass parameter one time, but use more times

  - by Gabriel L. Oliveira

  I'm trying to do this: commands = { 'py': 'python %s', 'md': 'markdown "%s" "%s.html"; gnome-open "%s.html"', } commands['md'] % 'file.md' But like you see, the commmands['md'] uses the parameter 3 times, but the commands['py'] just use once. How can I repeat the parameter without changing the last line (so, just passing the parameter one time?)

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• Jython saying "No visible constructors for class"

  - by clutch

  I have a jython servlet as part of a large application running in tomcat5. I tested a few Spring Framework classes and create the objects in the Jython servlet. When I try to create objects of classes in the application I catch an Exception message "No visible constructors for class". These java classes do have a public constructor class, such as: public SchoolImpl() { } I create the object in python: from com.dc.sports.entity import SchoolImpl ... school = SchoolImpl() What am I doing wrong?

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• Workflow for App Engine

  - by Jesse Aldridge

  I'm about to start an App Engine project for the first time. Most likely with Python. I was wondering if anybody could give me a leg up by detailing their workflow when developing for it. What tools do you use to go from start to deployed? Did you do any app engine specific configurations to those tools?

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• What's the Java equivalent of the term "pythonic"?

  - by Chris Sears

  If I wanted a single word that meant "conforming to Java language conventions", what would that be? Python has the term "pythonic". Would it be "javaish"?

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• Running iPython from the OSX terminal.

  - by Az

  So I'm going through the matplotlib documentation and prepared to use the iPython interactive Python shell with ipython -pylab. However I get this: Az's MBP:~ Az$ ipython -pylab -bash: ipython: command not found Did I fail to install iPython? I used easy_install as advised. Any ideas?

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• logging in continouous loop

  - by Mikkel Jans

  What would be a good way to create logs (with python logging module) inside a constant running loop, without producing a large amount of useless log-files? An example would be a loop that constant list a folder, and does some action when it sees a file of a specific type. I want to log that no files were found, or files were found but of a wrong type, without logging that same line constantly for each folder check, as it might run many times a second.

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• Check linux distro name

  - by Ockonal

  Hi guys, I have to get linux distro name from python script. There is dist method in platform module: import platform platform.dist() But it returns >>> platform.dist() ('', '', '') Under my Arch Linux. Why? How can I get the name. p.s. I have to check whether the distro is debian-based.

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• Javascript (and HTML rendering) engine without a GUI for automation?

  - by MTsoul

  Are there any libraries or frameworks that provide the functionality of a browser, but do not need to actually render physically onto the screen? I want to automate navigation on web pages (Mechanize does this, for example), but I want the full browser experience, including Javascript. Thus, I'd like to have a virtual browser of some sort, that I can use to "click on links" programmatically, have DOM elements and JS scripts render within it, and manipulate these elements. Solution preferably in Python, but I can manage others.

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• Writing a program to scrape forums

  - by seanieb

  Hi, I need to write a program to scrape forums. Should I write the program in Python using the Scrapy framework or should I use Php cURL? Also is there a Php equivalent to Scrapy? Thanks

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• how to convert the Interger date format into YYYYMMDD?

  - by ccfenix

  Python and Matlab quite often have integer date representations as follows: 733828.0 733829.0 733832.0 733833.0 733834.0 733835.0 733836.0 733839.0 733840.0 733841.0 these numbers correspond to some dates this year. Do you guys know which function can convert them back to YYYYMMDD format? thanks a million!

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• Can't get the value of an attribute with Selenium RC using xpath??

  - by Gj

  I'm trying to get the first href attribute in a page using Selenium RC (in Python): sel.get_text("xpath=//@href") this returns an empty string. However, an identical xpath on the same page inside Firefox (using the "View XPath" extension) yields the correct value. I've tried fiddling with it, but the same happens for other attributes (eg @class) -- is there something awfully wrong with selenium or am I overlooking something trivial here?

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• Huffman coding two characters as one

  - by Adomas

  Hi, I need huffman code(best in python or in java), which could encode text not by one character (a = 10, b = 11), but by two (ab = 11, ag = 10). Is it possible and if yes, where could i find it, maybe it's somewhere in the internet and i just can'd find it?

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• Tired of ASP.NET, which of the following should I learn and why?

  - by ke42

  Which of the following technology is easy to learn and fun for developing a website? If you could only pick one which would it be and why Clojure/Compojure+Ring/Moustache+Ring Groovy/Grails Python/Django Ruby/Rails Turbogear Cappuccino or Sproutcore Javascript/jQuery

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• Why should I use mock objects (Java)? Do all mocking frameworks serve the same purpose?

  - by Mehmet Yesin

  I'm preparing a presentation and I need to get a better understanding of what mocking is, what is the purpose of using it, what are the common situations that I should use mock objects? I found out that there are a bunch of mocking frameworks out there. Do they all do the same thing or do I use a specific framework for specific testing purpose? What are the differences between these frameworks? Which one would you recommend for testing Java? here are some stuff that I found: 1.MockingToolkitComparisonMatrix which seems biased. 2.What are mock objects in Java? This is a year old. I thought there might be some better answer today. Thank you.

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• How to mock WCF Web Services with Rhino Mocks.

  - by Will

  How do I test a class that utilizes proxy clients generated by a Web Service Reference? I would like to mock the client, but the generated client interface doesn't contain the close method, which is required to properly terminate the proxy. If I don't use the interface, but instead a concrete reference, I get access to the close method but loose the ability to mock the proxy. I'm trying to test a class similar to this: public class ServiceAdapter : IServiceAdapter, IDisposable { // ILoggingServiceClient is generated via a Web Service reference private readonly ILoggingServiceClient _loggingServiceClient; public ServiceAdapter() : this(new LoggingServiceClient()) {} internal ServiceAdapter(ILoggingServiceClient loggingServiceClient) { _loggingServiceClient = loggingServiceClient; } public void LogSomething(string msg) { _loggingServiceClient.LogSomething(msg); } public void Dispose() { // this doesn't compile, because ILoggingServiceClient doesn't contain Close(), // yet Close is required to properly terminate the WCF client _loggingServiceClient.Close(); } }

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• Numpy: Creating a complex array from 2 real ones?

  - by Duncan Tait

  I swear this should be so easy... Why is it not? :( In fact, I want to combine 2 parts of the same array to make a complex array: Data[:,:,:,0] , Data[:,:,:,1] These don't work: x = np.complex(Data[:,:,:,0], Data[:,:,:,1]) x = complex(Data[:,:,:,0], Data[:,:,:,1]) Am I missing something? Does numpy not like performing array functions on complex numbers? Here's the error: TypeError: only length-1 arrays can be converted to Python scalars Cheers

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• how to set wxPython main frame bottom right on screen?

  - by Hitesh Chavda

  For better description, +-----------------------+ | Desktop (screen) | | | | | | +----------+ | | | wxPython | | | | App. | | | | | | | | | | | +----------+ | +-----------------------+ Look at WxPython App., which is align to the bottom right of screen. How to I position my main frame because screen width is different on each pc? For Better Understanding, I want to pop-up small window like Digsby and FeedNotifier use! i think both use python!!

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• Using s/// in an expression

  - by mikeY

  I got a headache looking for this: How do you use s/// in an expression as opposed to an assignment. To clarify what I mean, I'm looking for a perl equivalent of python's re.sub(...) when used in the following context: newstring = re.sub('ab', 'cd', oldstring) The only way I know how to do this in perl so far is: $oldstring =~ s/ab/cd/; $newstring = $oldstring; Note the extra assignment.

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• Navigation graphics overlayed over video

  - by Hrishikesh Choudhari

  Hey, Imagine I have a video playing.. Can I have some sort of motion graphics being played 'over' that video.. Like say the moving graphics is on an upper layer than the video, which would be the lower layer.. I am comfortable in a C++ and Python, so a solution that uses these two will be highly appreciated.. Thank you in advance, Rishi..

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