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  • what changes when your input is giga/terabyte sized?

    - by Wang
    I just took my first baby step today into real scientific computing today when I was shown a data set where the smallest file is 48000 fields by 1600 rows (haplotypes for several people, for chromosome 22). And this is considered tiny. I write Python, so I've spent the last few hours reading about HDF5, and Numpy, and PyTable, but I still feel like I'm not really grokking what a terabyte-sized data set actually means for me as a programmer. For example, someone pointed out that with larger data sets, it becomes impossible to read the whole thing into memory, not because the machine has insufficient RAM, but because the architecture has insufficient address space! It blew my mind. What other assumptions have I been relying in the classroom that just don't work with input this big? What kinds of things do I need to start doing or thinking about differently? (This doesn't have to be Python specific.)

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  • Setting a Global Doctype

    - by Batfan
    Is it possible using PHP (I was thinking may the phpinfo file or a php.ini file) or an .htaccess file to set a doctype for an entire subdirectory? Basically, in a nutshell, I'm using a software that uses XSL templates to output data to a set of HTML files. Modifying the xsl:output tag to include the doctype breaks the template and therefore, does not work. Just adding the doctype in the XSL file, breaks it as well. I need the proper doctypes in place for my CSS to function properly, cross-browser. I realize that I could add the doctype to the HTML files after export but, I'm really striving to automate this process. Any thoughts?

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  • How can chunks be allocated in a node.js stream in object mode all at once?

    - by Quentin Engles
    I can see how buffers, and strings can be sent as chunks, but I'm having a problem thinking about how streams can be dealt when working in object mode. Say I have a byte stream from an http request message. I want to take that message, parse, and then transform it into one big object. I already know how to parse the message. What I'm wondering is if the message is big so it has many chunks, but I want to make one object for the output how can I make sure the data event waits for the whole thing? Is this just a matter of not using the push method until the chunked data has finished being sent? That would then restrict the stream data output to a smaller object which I think I'm fine with for now. As an added condition the larger data will be reduced in size after the the transform.

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  • issue running a batch script to kill a process

    - by user657064
    I am using the following script on a command line to kill a hypothetical notepad process (using a Korn shell in Windows XP, if that matters): kill $(tasklist | grep -i notepad.exe | awk '{print 2}') Now I take this line, and put it into a batch file c:\temp\testkill.bat, thinking that I should just as well be able to kill the process by running the batch file. However, when I run the batch file, I get the following awk error about unbalanced parentheses: C:/Temp ./testkill.bat C:\Tempkill $(tasklist | grep -i notepad.exe | awk '{print $2}') awk: unbalanced () Context is: {print $2}) <<< C:/Temp So I'm baffled as to why I am getting this error about unbalanced parentheses when I run this script via a batch file, but have no issues when I run the command directly from the command line? (Btw, I'm not necessarily tied to this way of killing a process - as a total noob to shell scripting, I am additionally wondering why if I write the following on the command line: tasklist | grep -i notepad.exe | awk '{print $2}' | kill the process ID that comes out of the tasklist/grep/awk calls doesn't seem to properly get piped to kill...)

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  • Programming practice

    - by exc1z
    I've decided to get some experience working on some project this summer. Due to local demand on market I would prefer to learn Java (Standard and Enterprise Editions). But I can't even to conjecture what kind of project to do. Recently I had some ideas about C. With C I could to contribute to huge Linux projects. I don't mean that my work will be surely commited. I could get the code and practice with it. But C it's not right thing to get good job in my area. In case of JavaSE there is a chance to develop some desktop applications. But thinking about JavaEE I get stuck. I'll be very thankful for answers.

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  • Confusion with cookie session token and oauth2.0 don't know where to go anymore

    - by byte_slave
    Hi guys, I'm completely confused, frustrated and nothing seems to make sense and work any more. I' dev some iframe fb app and i've been using the javascript sdk (FB.Init()) to get the access_token, but doesn't always work, sometimes i'm already logged into FB and doesn't works... Did some reading, and read also that there is problems using cookies in iframes in Opera and IE, so I was thinking in use the OAuth 2.0 but i'm not sure how via facebook sdk c# and now I'm now completely lost, don't know if i still need to use the javascript FB.Init(). Documentation out there is poor and unclear, a lot of stuff refers to old code, and after hours of reading, jumping on examples, i'm completely messed up and confused. Can some, please, point/explain/enlightening me about this? Thanks a lot guys, appreciated! Merry christmas!

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  • Java: how to represent graphs?

    - by Rosarch
    I'm implementing some algorithms to teach myself about graphs and how to work with them. What would you recommend is the best way to do that in Java? I was thinking something like this: public class Vertex { private ArrayList<Vertex> outnodes; //Adjacency list. if I wanted to support edge weight, this would be a hash map. //methods to manipulate outnodes } public class Graph { private ArrayList<Vertex> nodes; //algorithms on graphs } But I basically just made this up. Is there a better way? Also, I want it to be able to support variations on vanilla graphs like digraphs, weighted edges, multigraphs, etc.

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  • Can't read output of httpservice

    - by tag
    I have an HTTPservice that uses id="myhttp" url="site.com/script.php" method="POST" resultFormat="xml" script.php returns $output = '' . $worked . ''; echo $output; Problem is when I try to read worked, it tells me the variable worked is not there event.result.worked myhttp.lastResult.worked The only thing that works is using toString() myhttp.lastResult.toString() or event.result.toString() What am I doing wrong? I plan to add other variables to the output time, so need to access each time and worked separately. I may also need to return multiple responses each with their own worked and time values. How do I do that. I was thinking to not use XML. Is there a more lightweight option. Flex shows I have the following options: array e4x flashvars object text xml

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  • Visual Studio 2005 - strange characters rendered for ANSI text

    - by Apogee
    Hi all, Has anyone seen this odd text rendering issue in VS2005 before? The first line of using statements actually says "using System;". If I copy the line as it is displayed and paste into notepad, the text appears correctly, so clearly the character codes are correct. In addition, the solution compiles and runs correctly. I was thinking it might be due to ClearCase using a different character encoding as all the solutions we're using were freshly checked-out yesterday on to a new build machine, but this is only happening in 2 of our ~30 solutions. Incidentally the same .cs files when opened in VS2008 render correctly on this machine, could this be a corruption in VS2005?

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  • Check for state change in objects using serialization?

    - by sev7n
    I have a form that is bind to an object, and when the user trying to leave the form, I want to warn them if anything on the form has been changed, and prompt them to save. My question is, is there any way to achieve this without implementing IComparar for all my classes in the binded object? I was thinking if there is a way I can serialize my object when loading the form, and do a simple comparison against the change object that also get serialized. Something like a string comparison. Hope that make sense, Thanks

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  • iPhone: Custom UITableViewCell with multiple areas that respond to taps?

    - by Nick
    I've been asked to create a custom UITableViewCell with multiple areas that can be tapped. These areas won't have buttons or any graphics - they'll be invisible. 3 different methods will be called depending on which third of the cell the user taps i.e. || decrementFooCount || viewFooDetails || incrementFooCount || The cell has a few labels on it that need to be visible at all times - the fooName and fooCount. I'm thinking perhaps three hidden UIButtons over the cell? I also need to maintain the swipe to delete default behavior.

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  • How to use JNI, but only when available for current platform?

    - by Mecki
    What is the common way (or best practice) to optionally use JNI? E.g. I have a Java class and this class is 100% pure Java, so it can run on all platforms. However, on some platforms I'd like to speed up some heavy calculations using JNI - which works fine. Unfortunately I cannot support any existing Java platform in the world. So I guess it is fine to initially only support the big three: Linux, Windows, Mac OS X. So what I'd like to do is to use JNI on those three platforms and use the 100% pure Java version on all other platforms. Now I can think of various ways how to do that (loading class dynamically for example and either loading the JNI class or the pure Java one), but thinking that this is a common issue that thousands of projects had to solve in the past for sure, I'm really surprised to not find any documentation or references to the question how to solve this most elegantly or effectively.

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  • What's the point of having to provide a cacheName for NSFetchedResultsController?

    - by dontWatchMyProfile
    NSFetchedResultsController *frc = [[NSFetchedResultsController alloc] initWithFetchRequest:fetchRequest managedObjectContext:moc sectionNameKeyPath:nil cacheName:@"Root"]; Why do we have to think about a cacheName? How important is this decision? What would happen if there are two NSFetchedResultsController instances using the exact same cacheName? Does that matter? Is that some kind of singleton stuff? Thinking about Core Animation, there's also this strange animationID parameter, but setting it to the exact same thing for dozens of simultaneous animations doesn't hurt the animations at all. So I guess it's probably the same thing here...or not?

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  • Converting one alphabet to another

    - by Branimir
    I am preparing a simple dictionary project and I have prepared it to search in 2 languages. Still, as one of them is using Cyrillic letters, I have to be able to check in the database, even if the word is written in Latin letters. What do I mean in Cyrillic: ??? in Latin: kon Both should give the description of the word (in this case "horse"). I have been thinking of using two structures with two alphabets in order to achieve this....Still somehow I cannot get it. Does some of you have experience in a similar situation? If yes - please share an advice or code-sample.

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  • Mac: How to see list of running network services?

    - by Jordan
    I am writing an application that needs to connect with a running network service on a Mac. Problem is, I have no idea what the service is called or even what port it uses. Is there a way to browse all running network services on my Mac? More info: I am connecting to a MIDI network session (found under 'Audio MIDI settings', present on all OSX installs). Am I correct in thinking this is a network service? I am planning to use NSNetServiceBrowser to locate all local computers running this service. (is this the best way to go about it?) Any help is much appreciated - thanks!

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  • Delphi developer switching to C#

    - by Dorin Duminica
    Hello, I'm a Delphiholic for quite some time now and lately I was thinking of learning some C# as well, however I'm kinda' "afraid of the unknown", I've done some simple apps as a test drive for C# and I have to admit that I've liked it, HOWEVER I do not really like the IDE... that being said here's the question that I would appreciate if others who went down this path would answer: As a Delphi developer what are the "main basic" changes from the Delphi language(by basic I mean basic -- utility functions, streams, etc.), I'm used to add "System, Classes, Windows" to uses not "use System.XXX.YYY.ZZZ", I'm trying to make a partial equality in my mind from Delphi to C# until I can see where does Delphi go hand-in-hand with C# and so on... I hope the question is pretty clear, if not, do not hesitate to swear me and I'll try to clarify as well as I can :-)

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  • printing double in binary

    - by Happy Mittal
    In Thinking in C++ by Bruce eckel, there is a program given to print a double value in binary.(Chapter 3, page no. 189) int main(int argc, char* argv[]) { if(argc != 2) { cout << "Must provide a number" << endl; exit(1); } double d = atof(argv[1]); unsigned char* cp = reinterpret_cast<unsigned char*>(&d); for(int i = sizeof(double); i > 0 ; i -= 2) { printBinary(cp[i-1]); printBinary(cp[i]); } } Here while printing cp[i] when i=8(assuming double is of 8 bytes), wouldn't it be undefined behaviour? I mean this code doesn't work as it doesn't print cp[0].

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  • Is it possible to apply inheritance to a Singleton class?

    - by Bragaadeesh
    Hi, Today I faced one question in interview. Is it possible to apply inheritance concept on Singleton Classes. I said since the constructor is private, we cannot extend that Singleton class (can someone please validate this). Next thing he asked me is to apply inheritance on that Singleton class. So, I made the Singleton's constructor as protected thinking that child's constructor also has be protected. But I was wrong the child can have a modifier either equal to or higher than that. So, I asked him to give a real world example on such a case. He was not able to give me one and said that I cant ask questions and wanted me to tell whether this scenario is possible or not. I went kind of blank. My question here is, Is this possible? Even if its possible, what is the use of it? What real world scenario would demand such a use. Thanks

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  • XML through web service

    - by Krt_Malta
    Hi, I have some data which I think would be best to be represented in XML. I want this data to be transmitted from a Java Web service to a web client so basically I want the XML data to be transmitted. What I'm thinking is reading from the XML file from the web service converting it to an object and sending it to the client and the client would convert it to xml again. But I'm not sure if this is the best way I could do it... Any opinions please? Thanks and regards, Krt_Malta

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  • Working effectively with unit tests / Anyone tried the in-assembly approach?

    - by CodingCrapper
    I'm trying to re-introduce unit testing into my team as our current coverage is very poor. Our system is quite large 40+ projects/assemblies. We current use a project named [SystemName].Test.csproj were all the test code is dumped and organised to represent the namespaces using folders. This approach is not very scalable and makes it difficult to find tests. I've been thinking about added a Tests folder to each project, this would put the unit tests "in the developers face" and make them easy to find. The downside is the Production release code would contain references to nunit, nmocks as well as the test code and test data.... Has anyone tried this approach? How is everyone else working with unit tests on large projects? Having a Tests project per "real" project/assembly would introduce too many new projs. Thanks in advance

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  • Querying my JPA provider (Hibernate) for a collection of <Id,Name> of an entity

    - by Ittai
    Hi, I have an entity which looks something like this: Id (PK) Name Other business properties and associations... I have the need for my DAL (JPA with hibernate as provider) to return a list of the entities which correlate to some constraints (or just return them all) but instead of returning the entities themselves I'd like to receive only the Id and the Name properties. I know this can be achieved with HQL/SQL (something like: select id,name from entity where...) but I don't want to go down that road. I was thinking of somehow defining the pair a compositioned part of the entity and thought that might help me but I'm not sure that's "legal" as the Id is the PK. The logic for this scenario is to have a textbox which asynchronously queries the web-service (and through it the DAL) for the relevant entities and once an entity is selected then it is loaded as a whole and shipped to the front-end. Would appreciate any feedback, Ittai

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  • What are the best security measures to take for making certain directories private?

    - by Sattvic
    I have a directory on my server that I do not want Search Engines to crawl and I already set this rule in robots.txt I do want people that have logged in to be able to have access to this directory without having to enter a password or anything. I am thinking that a cookie is the best thing to put on users computers after they login, and if they have a cookie, they can access the directory. Is this possible, or is there a better way? I want people without this cookie to not have access to this directory - access for members only Any suggestions on the best design for this?

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  • API verbs for an interruptible operation

    - by 280Z28
    I have a long running task as part of my application. The task can be started, paused, resumed, and cancelled. I'm trying to find the best interface for these operations. Two seem clear: Pause and Cancel. This leaves the start and resume operations. I could include both Start and Resume. This has the downside of either requiring the API consumer to check the state before starting/resuming the operation to call the right method, or making the methods aliases of each other. I'm thinking I should include either Start or Resume, but I don't know which one is the most appropriate. Does anyone have any examples in the .NET Framework of such behavior? I prefer to follow established patterns whenever they are available.

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  • WPF: how to make normal listbox left-drag-select behavior use middle mouse instead?

    - by Scott Bilas
    I'm building a special listbox control that our designers want customized in some tweaky ways. One thing they want to see is that the middle button-drag does what the left button-drag normally does (we are repurposing left-drag to other things). So it needs the two key features that left-drag does in a ListBox default implementation: While holding down the button and dragging, the selection starts where I click down and extends to where I drag. While dragging outside the listbox region, it scrolls if there is scrollable space in that direction. Before I go an duplicate this functionality by hand, is there any easy way to fool ListBox into thinking it's getting left-mouse drag events but instead is getting middle-mouse?

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  • Does iOS 4 Have "Real" Multitasking?

    - by pkulak
    Ever since the first beta came out I've been trying to find out if "real" multitasking is possible. I.E., can you put a program in the background and have it hang on to a network connection indefinitely? I'm thinking about IM or IRC apps, for example. I've compiled an app myself on OS 4, and without changing a thing it appeared to stay running in the background, but for all I know it was just suspended to memory. The docs say the best you can do is request up to 10 minutes, but in the developer presentation they showed off Skype sitting in the background and then notifying the user that a call was coming in. Does anyone know for sure how this is all going to work?

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