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• no namenode error in pseudo-mode

  - by Anshu Basia

  I'm new to hadoop and is in learning phase. As per Hadoop Definitve guide, i have set up my hadoop in pseudo distributed mode and everything was working fine. I was even able to execute all the examples from chapter 3 yesterday. Today, when i rebooted my unix and tried to run start-dfs.sh and then tried http://localhost/50070....it is showing error and when i try to stop dfs (stop-dfs.sh) it says no namenode to stop. I have been googling the issue but no result. Also, when i format my namenode again...everything starts working fine and i'm able to connect to the localhost/50070 and even replicate files and directories in hdfs but as soon as i restart my linux and try to connect to hdfs the same problem comes up. Below is the error log: ************************************************************/ 2011-06-22 15:45:55,249 INFO org.apache.hadoop.hdfs.server.namenode.NameNode: STARTUP_MSG: /************************************************************ STARTUP_MSG: Starting NameNode STARTUP_MSG: host = ubuntu/127.0.1.1 STARTUP_MSG: args = [] STARTUP_MSG: version = 0.20.203.0 STARTUP_MSG: build = http://svn.apache.org/repos/asf/hadoop/common/branches/branch-0.20-security-203 -r 1099333; compiled by 'oom' on Wed May 4 07:57:50 PDT 2011 ************************************************************/ 2011-06-22 15:45:56,383 INFO org.apache.hadoop.metrics2.impl.MetricsConfig: loaded properties from hadoop-metrics2.properties 2011-06-22 15:45:56,455 INFO org.apache.hadoop.metrics2.impl.MetricsSourceAdapter: MBean for source MetricsSystem,sub=Stats registered. 2011-06-22 15:45:56,494 INFO org.apache.hadoop.metrics2.impl.MetricsSystemImpl: Scheduled snapshot period at 10 second(s). 2011-06-22 15:45:56,494 INFO org.apache.hadoop.metrics2.impl.MetricsSystemImpl: NameNode metrics system started 2011-06-22 15:45:57,007 INFO org.apache.hadoop.metrics2.impl.MetricsSourceAdapter: MBean for source ugi registered. 2011-06-22 15:45:57,031 WARN org.apache.hadoop.metrics2.impl.MetricsSystemImpl: Source name ugi already exists! 2011-06-22 15:45:57,059 INFO org.apache.hadoop.metrics2.impl.MetricsSourceAdapter: MBean for source jvm registered. 2011-06-22 15:45:57,070 INFO org.apache.hadoop.metrics2.impl.MetricsSourceAdapter: MBean for source NameNode registered. 2011-06-22 15:45:57,374 INFO org.apache.hadoop.hdfs.util.GSet: VM type = 32-bit 2011-06-22 15:45:57,374 INFO org.apache.hadoop.hdfs.util.GSet: 2% max memory = 19.33375 MB 2011-06-22 15:45:57,374 INFO org.apache.hadoop.hdfs.util.GSet: capacity = 2^22 = 4194304 entries 2011-06-22 15:45:57,374 INFO org.apache.hadoop.hdfs.util.GSet: recommended=4194304, actual=4194304 2011-06-22 15:45:57,854 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: fsOwner=anshu 2011-06-22 15:45:57,854 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: supergroup=supergroup 2011-06-22 15:45:57,854 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: isPermissionEnabled=true 2011-06-22 15:45:57,868 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: dfs.block.invalidate.limit=100 2011-06-22 15:45:57,869 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: isAccessTokenEnabled=false accessKeyUpdateInterval=0 min(s), accessTokenLifetime=0 min(s) 2011-06-22 15:45:58,769 INFO org.apache.hadoop.hdfs.server.namenode.FSNamesystem: Registered FSNamesystemStateMBean and NameNodeMXBean 2011-06-22 15:45:58,809 INFO org.apache.hadoop.hdfs.server.namenode.NameNode: Caching file names occuring more than 10 times **2011-06-22 15:45:58,825 INFO org.apache.hadoop.hdfs.server.common.Storage: Storage directory /tmp/hadoop-anshu/dfs/name does not exist. 2011-06-22 15:45:58,827 ERROR org.apache.hadoop.hdfs.server.namenode.FSNamesystem: FSNamesystem initialization failed. org.apache.hadoop.hdfs.server.common.InconsistentFSStateException: Directory /tmp/hadoop-anshu/dfs/name is in an inconsistent state: storage directory does not exist or is not accessible. at org.apache.h**adoop.hdfs.server.namenode.FSImage.recoverTransitionRead(FSImage.java:291) at org.apache.hadoop.hdfs.server.namenode.FSDirectory.loadFSImage(FSDirectory.java:97) at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.initialize(FSNamesystem.java:379) at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.<init>(FSNamesystem.java:353) at org.apache.hadoop.hdfs.server.namenode.NameNode.initialize(NameNode.java:254) at org.apache.hadoop.hdfs.server.namenode.NameNode.<init>(NameNode.java:434) at org.apache.hadoop.hdfs.server.namenode.NameNode.createNameNode(NameNode.java:1153) at org.apache.hadoop.hdfs.server.namenode.NameNode.main(NameNode.java:1162) 2011-06-22 15:45:58,828 ERROR org.apache.hadoop.hdfs.server.namenode.NameNode: org.apache.hadoop.hdfs.server.common.InconsistentFSStateException: Directory /tmp/hadoop-anshu/dfs/name is in an inconsistent state: storage directory does not exist or is not accessible. at org.apache.hadoop.hdfs.server.namenode.FSImage.recoverTransitionRead(FSImage.java:291) at org.apache.hadoop.hdfs.server.namenode.FSDirectory.loadFSImage(FSDirectory.java:97) at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.initialize(FSNamesystem.java:379) at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.<init>(FSNamesystem.java:353) at org.apache.hadoop.hdfs.server.namenode.NameNode.initialize(NameNode.java:254) at org.apache.hadoop.hdfs.server.namenode.NameNode.<init>(NameNode.java:434) at org.apache.hadoop.hdfs.server.namenode.NameNode.createNameNode(NameNode.java:1153) at org.apache.hadoop.hdfs.server.namenode.NameNode.main(NameNode.java:1162) 2011-06-22 15:45:58,829 INFO org.apache.hadoop.hdfs.server.namenode.NameNode: SHUTDOWN_MSG: /************************************************************ SHUTDOWN_MSG: Shutting down NameNode at ubuntu/127.0.1.1 ************************************************************/ Any help is appreciated Thank-you

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• Google Maps v3: Enforcing min. zoom level when using fitBounds

  - by chris

  I'm drawing a series of markers on a map (using v3 of the maps api). In v2, I had the following code: bounds = new GLatLngBounds(); ... loop thru and put markers on map ... bounds.extend(point); ... end looping map.setCenter(bounds.getCenter()); var level = map.getBoundsZoomLevel(bounds); if ( level == 1 ) level = 5; map.setZoom(level > 6 ? 6 : level); And that work fine to ensure that there was always an appropriate level of detail displayed on the map. I'm trying to duplicate this functionality in v3, but the setZoom and fitBounds don't seem to be cooperating: ... loop thru and put markers on the map var ll = new google.maps.LatLng(p.lat,p.lng); bounds.extend(ll); ... end loop var zoom = map.getZoom(); map.setZoom(zoom > 6 ? 6 : zoom); map.fitBounds(bounds); I've tried different permutation (moving the fitBounds before the setZoom, for example) but nothing I do with setZoom seems to affect the map. Am I missing something? Is there a way to do this?

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• JavaScript - Settting property on Object in Image load function, property not set once outside funct

  - by Sunday Ironfoot

  Sometimes JavaScript doesn't make sense to me, consider the following code that generates a photo mosaic based on x/y tiles. I'm trying to set a .Done property to true once each Mosaic image has been downloaded, but it's always false for some reason, what am I doing wrong? var tileData = []; function generate() { var image = new Image(); image.onload = function() { // Build up the 'tileData' array with tile objects from this Image for (var i = 0; i < tileData.length; i++) { var tile = tileData[i]; var tileImage = new Image(); tileImage.onload = function() { // Do something with this tile Image tile.Done = true; }; tileImage.src = tile.ImageUrl; } }; image.src = 'Penguins.jpg'; tryDisplayMosaic(); } function tryDisplayMosaic() { setTimeout(function() { for (var i = 0; i < tileData.length; i++) { var tile = tileData[i]; if (!tile.Done) { tryDisplayMosaic(); return; } } // If we get here then all the tiles have been downloaded alert('All images downloaded'); }, 2000); } Now for some reason the .Done property on the tile object is always false, even though it is explicitly being set to true inside tileImage.onload = function(). And I can ensure you that this function DOES get called because I've placed an alert() call inside it. Right now it's just stuck inside an infinite loop calling tryDisplayMosaic() constantly. Also if I place a loop just before tryDisplayMosaic() is called, and in that loop I set .Done = true, then .Done property is true and alert('All images downloaded'); will get called.

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• Django - no module named app

  - by Koran

  Hi, I have been trying to get an application written in django working - but it is not working at all. I have been working on for some time too - and it is working on dev-server perfectly. But I am unable to put in the production env (apahce). My project name is apstat and the app name is basic. I try to access it as following Blockquote http://hostname/apstat But it shows the following error: MOD_PYTHON ERROR ProcessId: 6002 Interpreter: 'domU-12-31-39-06-DD-F4.compute-1.internal' ServerName: 'domU-12-31-39-06-DD-F4.compute-1.internal' DocumentRoot: '/home/ubuntu/server/' URI: '/apstat/' Location: '/apstat' Directory: None Filename: '/home/ubuntu/server/apstat/' PathInfo: '' Phase: 'PythonHandler' Handler: 'django.core.handlers.modpython' Traceback (most recent call last): File "/usr/lib/python2.6/dist-packages/mod_python/importer.py", line 1537, in HandlerDispatch default=default_handler, arg=req, silent=hlist.silent) File "/usr/lib/python2.6/dist-packages/mod_python/importer.py", line 1229, in _process_target result = _execute_target(config, req, object, arg) File "/usr/lib/python2.6/dist-packages/mod_python/importer.py", line 1128, in _execute_target result = object(arg) File "/usr/lib/pymodules/python2.6/django/core/handlers/modpython.py", line 228, in handler return ModPythonHandler()(req) File "/usr/lib/pymodules/python2.6/django/core/handlers/modpython.py", line 201, in __call__ response = self.get_response(request) File "/usr/lib/pymodules/python2.6/django/core/handlers/base.py", line 134, in get_response return self.handle_uncaught_exception(request, resolver, exc_info) File "/usr/lib/pymodules/python2.6/django/core/handlers/base.py", line 154, in handle_uncaught_exception return debug.technical_500_response(request, *exc_info) File "/usr/lib/pymodules/python2.6/django/views/debug.py", line 40, in technical_500_response html = reporter.get_traceback_html() File "/usr/lib/pymodules/python2.6/django/views/debug.py", line 114, in get_traceback_html return t.render(c) File "/usr/lib/pymodules/python2.6/django/template/__init__.py", line 178, in render return self.nodelist.render(context) File "/usr/lib/pymodules/python2.6/django/template/__init__.py", line 779, in render bits.append(self.render_node(node, context)) File "/usr/lib/pymodules/python2.6/django/template/debug.py", line 81, in render_node raise wrapped TemplateSyntaxError: Caught an exception while rendering: No module named basic Original Traceback (most recent call last): File "/usr/lib/pymodules/python2.6/django/template/debug.py", line 71, in render_node result = node.render(context) File "/usr/lib/pymodules/python2.6/django/template/debug.py", line 87, in render output = force_unicode(self.filter_expression.resolve(context)) File "/usr/lib/pymodules/python2.6/django/template/__init__.py", line 572, in resolve new_obj = func(obj, *arg_vals) File "/usr/lib/pymodules/python2.6/django/template/defaultfilters.py", line 687, in date return format(value, arg) File "/usr/lib/pymodules/python2.6/django/utils/dateformat.py", line 269, in format return df.format(format_string) File "/usr/lib/pymodules/python2.6/django/utils/dateformat.py", line 30, in format pieces.append(force_unicode(getattr(self, piece)())) File "/usr/lib/pymodules/python2.6/django/utils/dateformat.py", line 175, in r return self.format('D, j M Y H:i:s O') File "/usr/lib/pymodules/python2.6/django/utils/dateformat.py", line 30, in format pieces.append(force_unicode(getattr(self, piece)())) File "/usr/lib/pymodules/python2.6/django/utils/encoding.py", line 71, in force_unicode s = unicode(s) File "/usr/lib/pymodules/python2.6/django/utils/functional.py", line 201, in __unicode_cast return self.__func(*self.__args, **self.__kw) File "/usr/lib/pymodules/python2.6/django/utils/translation/__init__.py", line 62, in ugettext return real_ugettext(message) File "/usr/lib/pymodules/python2.6/django/utils/translation/trans_real.py", line 286, in ugettext return do_translate(message, 'ugettext') File "/usr/lib/pymodules/python2.6/django/utils/translation/trans_real.py", line 276, in do_translate _default = translation(settings.LANGUAGE_CODE) File "/usr/lib/pymodules/python2.6/django/utils/translation/trans_real.py", line 194, in translation default_translation = _fetch(settings.LANGUAGE_CODE) File "/usr/lib/pymodules/python2.6/django/utils/translation/trans_real.py", line 180, in _fetch app = import_module(appname) File "/usr/lib/pymodules/python2.6/django/utils/importlib.py", line 35, in import_module __import__(name) ImportError: No module named basic My settings.py is as follows: INSTALLED_APPS = ( 'django.contrib.auth', 'django.contrib.contenttypes', 'django.contrib.sessions', 'django.contrib.sites', 'apstat.basic', 'django.contrib.admin', ) If I remove the apstat.basic, it goes through, but that is not a solution. Is it something I am doing in apache? My apache - settings are - <VirtualHost *:80> ServerAdmin webmaster@localhost DocumentRoot /home/ubuntu/server/ <Directory /> Options None AllowOverride None </Directory> <Directory /home/ubuntu/server/apstat> AllowOverride None Order allow,deny allow from all </Directory> <Location "/apstat"> SetHandler python-program PythonHandler django.core.handlers.modpython SetEnv DJANGO_SETTINGS_MODULE apstat.settings PythonOption django.root /home/ubuntu/server/ PythonDebug On PythonPath "['/home/ubuntu/server/'] + sys.path" </Location> </VirtualHost> I have now sat for more than a day on this. If someone can help me out, it would be very nice.

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• jQuery + InnovaStudio WYSIWYG Editor

  - by Phil Sturgeon

  I am trying to avoid hard-coding each instance of this WYSIWYG editor so I am using jQuery to create an each() loop based on function name. Annoyingly InnovaStudio seems to explode when I try. Documentation Attempt #1 <script type="text/javascript"> /* id = $(this).attr('id'); if(id.length == 0) { id = 'wysiwyg-' + wysiwyg_count; $(this).attr('id', id); } WYSIWYG[wysiwyg_count] = new InnovaEditor('WYSIWYG[' + wysiwyg_count + ']'); WYSIWYG[wysiwyg_count].REPLACE(id); */ var demo = new InnovaEditor('demo'); demo.REPLACE('wysiwyg-1'); console.log('loop'); </script> Effect Works fine, but of course only works for a single instance of the editor. If I want multiple instances I need to use an each. Attempt #2: <script type="text/javascript"> var wysiwyg_count = 1; //var WYSIWYG = []; var demo; (function($) { $(function() { $('.wysiwyg-simple').each(function(){ /* id = $(this).attr('id'); if(id.length == 0) { id = 'wysiwyg-' + wysiwyg_count; $(this).attr('id', id); } WYSIWYG[wysiwyg_count] = new InnovaEditor('WYSIWYG[' + wysiwyg_count + ']'); WYSIWYG[wysiwyg_count].REPLACE(id); */ demo = new InnovaEditor('demo'); demo.REPLACE('wysiwyg-1'); console.log('loop'); }); }); })(jQuery); </script> Effect Replaces the entire HTML body of my page with JUST WYSIWYG related code and complains as no JS is available (not even Firebug, so can't debug). Does anybody know what the hell is going on here?

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• Django TemplateSyntaxError only on live server (templates exist)

  - by Tom

  I'm getting a strange error that only occurs on the live server. My Django templates directory is set up like so base.html two-column-base.html portfolio index.html extranet base.html index.html The portfolio pages work correctly locally on multiple machines. They inherit from either the root base.html or two-column-base.html. However, now that I've posted them to the live box (local machines are Windows, live is Linux), I get a TemplateSyntaxError: "Caught TemplateDoesNotExist while rendering: base.html" when I try to load any portfolio pages. It seems to be a case where the extends tag won't work in that root directory (???). Even if I do a direct_to_template on two-column-base.html (which extends base.html), I get that error. The extranet pages all work perfectly, but those templates all live inside the /extranet folder and inherit from /extranet/base.html. Possible issues I've checked: file permissions on the server are fine the template directory is correct on the live box (I'm using os.path.dirname(os.path.realpath(__file__)) to make things work across machines) files exist and the /templates directories exactly match my local copy removing the {% extends %} block from the top of any broken template causes the templates to render without a problem manually starting a shell session and calling get_template on any of the files works, but trying to render it blows up with the same exception on any of the extended templates. Doing the same with base.html, it renders perfectly (base.html also renders via direct_to_template) Django 1.2, Python 2.6 on Webfaction. Apologies in advance because this is my 3rd or 4th "I'm doing something stupid" question in a row. The only x-factor I can think of is this is my first time using Mercurial instead ofsvn. Not sure how I could have messed things up via that. EDIT: One possible source of problems: local machine is Python 2.5, live is 2.6. Here's a traceback of me trying to render 'two-column-base.html', which extends 'base.html'. Both files are in the same directory, so if it can find the first, it can find the second. c is just an empty Context object. >>> render_to_string('two-column-base.html', c) Traceback (most recent call last): File "<console>", line 1, in <module> File "/home/lightfin/webapps/django/lib/python2.6/django/template/loader.py", line 186, in render_to_string return t.render(context_instance) File "/home/lightfin/webapps/django/lib/python2.6/django/template/__init__.py", line 173, in render return self._render(context) File "/home/lightfin/webapps/django/lib/python2.6/django/template/__init__.py", line 167, in _render return self.nodelist.render(context) File "/home/lightfin/webapps/django/lib/python2.6/django/template/__init__.py", line 796, in render bits.append(self.render_node(node, context)) File "/home/lightfin/webapps/django/lib/python2.6/django/template/debug.py", line 72, in render_node result = node.render(context) File "/home/lightfin/webapps/django/lib/python2.6/django/template/loader_tags.py", line 103, in render compiled_parent = self.get_parent(context) File "/home/lightfin/webapps/django/lib/python2.6/django/template/loader_tags.py", line 100, in get_parent return get_template(parent) File "/home/lightfin/webapps/django/lib/python2.6/django/template/loader.py", line 157, in get_template template, origin = find_template(template_name) File "/home/lightfin/webapps/django/lib/python2.6/django/template/loader.py", line 138, in find_template raise TemplateDoesNotExist(name) TemplateSyntaxError: Caught TemplateDoesNotExist while rendering: base.html I'm wondering if this is somehow related to the template caching that was just added to Django. EDIT 2 (per lazerscience): template-related settings: import os PROJECT_ROOT = os.path.dirname(os.path.realpath(__file__)) TEMPLATE_DIRS = ( os.path.join(PROJECT_ROOT, 'templates'), ) sample view: def project_list(request, jobs, extra_context={}): context = { 'jobs': jobs, } print context context.update(extra_context) return render_to_response('portfolio/index.html', context, context_instance=RequestContext(request)) The templates in reverse-order are: http://thosecleverkids.com/junk/index.html http://thosecleverkids.com/junk/portfolio-base.html http://thosecleverkids.com/junk/two-column-base.html http://thosecleverkids.com/junk/base.html though in the real project the first two live in a directory called "portfolio".

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• Fastest image iteration in Python

  - by Greg

  I am creating a simple green screen app with Python 2.7.4 but am getting quite slow results. I am currently using PIL 1.1.7 to load and iterate the images and saw huge speed-ups changing from the old getpixel() to the newer load() and pixel access object indexing. However the following loop still takes around 2.5 seconds to run for an image of around 720p resolution: def colorclose(Cb_p, Cr_p, Cb_key, Cr_key, tola, tolb): temp = math.sqrt((Cb_key-Cb_p)**2+(Cr_key-Cr_p)**2) if temp < tola: return 0.0 else: if temp < tolb: return (temp-tola)/(tolb-tola) else: return 1.0 .... for x in range(width): for y in range(height): Y, cb, cr = fg_cbcr_list[x, y] mask = colorclose(cb, cr, cb_key, cr_key, tola, tolb) mask = 1 - mask bgr, bgg, bgb = bg_list[x,y] fgr, fgg, fgb = fg_list[x,y] pixels[x,y] = ( (int)(fgr - mask*key_color[0] + mask*bgr), (int)(fgg - mask*key_color[1] + mask*bgg), (int)(fgb - mask*key_color[2] + mask*bgb)) Am I doing anything hugely inefficient here which makes it run so slow? I have seen similar, simpler examples where the loop is replaced by a boolean matrix for instance, but for this case I can't see a way to replace the loop. The pixels[x,y] assignment seems to take the most amount of time but not knowing Python very well I am unsure of a more efficient way to do this. Any help would be appreciated.

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• identation control while developing a small python like language

  - by sap

  Hello, Im developing a small python like language using flex, byacc (for lexical and parsing) and C++, but i have a few questions regarding scope control. just as python it uses white spaces (or tabs) for identation, not only that but i want to implement index breaking like for instance if you type "break 2" inside a while loop thats inside another while loop it would not only break from the last one but from the first loop as well (hence the number 2 after break) and so on. example: while 1 while 1 break 2 end end #after break 2 it would jump right here but since i dont have an "anti" tab character to check when a scope ends (like C for example i would just use the '}' char) i was wondering if this method would the the best: i would define a global variable, like "int tabIndex" on my yacc file that i would access in my lex file using extern. then everytime i find a tab character on my lex file i would increment that variable by 1. when parsing on my yacc file if i find a "break" keyword i would decrement by the amount typed after it from the tabIndex variable, and when i reach and EOF after compiling and i get a tabIndex != 0 i would output compilation error. now the problem is, whats the best way to see if the identation got reduced, should i read \b (backspace) chars from lex and then reduce the tabIndex variable (when the user doesnt use break)? another method to achieve this? also just another small question, i want every executable to have its starting point on the function called start() should i hardcode this onto my yacc file? sorry for the long question any help is greatly appretiated. also if someone can provide an yacc file for python would be nice as a guideline (tried looking on google and had no luck). thanks in advance.

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• How can I use Qt to get html code of the redirected page??

  - by Claire Huang

  I'm trying to use Qt to download the html code from the following url: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=nucleotide&cmd=search&term=AB100362 this url will re-direct to www.ncbi.nlm.nih.gov/nuccore/27884304 I try to do it by following way, but I cannot get anything. it works for some webpage such as www.google.com, but not for this NCBI page. is there any way to get this page?? QNetworkReply::NetworkError downloadURL(const QUrl &url, QByteArray &data) { QNetworkAccessManager manager; QNetworkRequest request(url); QNetworkReply *reply = manager.get(request); QEventLoop loop; QObject::connect(reply, SIGNAL(finished()), &loop, SLOT(quit())); loop.exec(); if (reply->error() != QNetworkReply::NoError) { return reply->error(); } data = reply->readAll(); delete reply; return QNetworkReply::NoError; } void GetGi() { int pos; QString sGetFromURL = "http://www.ncbi.nlm.nih.gov/entrez/query.fcgi"; QUrl url(sGetFromURL); url.addQueryItem("db", "nucleotide"); url.addQueryItem("cmd", "search"); url.addQueryItem("term", "AB100362"); QByteArray InfoNCBI; int errorCode = downloadURL(url, InfoNCBI); if (errorCode != 0 ) { QMessageBox::about(0,tr("Internet Error "), tr("Internet Error %1: Failed to connect to NCBI.\t\nPlease check your internect connection.").arg(errorCode)); return "ERROR"; } }

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• theoretical and practical matrix multiplication FLOP

  - by mjr

  I wrote traditional matrix multiplication in c++ and tried to measure and compare its theoretical and practical FLOP. As I know inner loop of MM has 2 operation therefore simple MM theoretical Flops is 2*n*n*n (2n^3) but in practice I get something like 4n^3 + number of operation which is 2 i.e. 6n^3 also if I just try to add up only one array a[i][j]++ practical flops then calculate like 3n^3 and not n^3 as you see again it is 2n^3 +1 operation and not 1 operation * n^3 . This is in case if I use 1D array in three nested loops as Matrix multiplication and compare flop, practical flop is the same (near) the theoretical flop and depend exactly as the number of operation in inner loop.I could not find the reason for this behaviour. what is the reason in both case? I know that theoretical flop is not the same as practical one because of some operations like load etc. system specification: Intel core2duo E4500 3700g memory L2 cache 2M x64 fedora 17 sample results: Matrix matrix multiplication 512*512 Real_time: 1.718368 Proc_time: 1.227672 Total flpops: 807,107,072 MFLOPS: 657.429016 Real_time: 3.608078 Proc_time: 3.042272 Total flpops: 807,024,448 MFLOPS: 265.270355 theoretical flop: 2*512*512*512=268,435,456 Practical flops= 6*512^3 =807,107,072 Using 1 dimensional array float d[size][size]:512 or any size for (int j = 0; j < size; ++j) { for (int k = 0; k < size; ++k) { d[k]=d[k]+e[k]+f[k]+g[k]+r; } } Real_time: 0.002288 Proc_time: 0.002260 Total flpops: 1,048,578 MFLOPS: 464.027161 theroretical flop: *4n^2=4*512^2=1,048,576* practical flop : 4n^2+overhead (other operation?)=1,048,578 3 loop version: Real_time: 1.282257 Proc_time: 1.155990 Total flpops: 536,872,000 MFLOPS: 464.426117 theoretical flop:4n^3 = 536,870,912 practical flop: *4n^3=4*512^3+overheads(other operation?)=536,872,000* thank you

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• Strange behavior due to wx.Frame.SetTitle

  - by Anurag Uniyal

  In a wxPython application, which i am porting to Mac OSX, I set title of app frame every 500msec in update UI event, and due to that all the panels and windows are refreshed. That seems strange to me and almost halts my application which has many custom drawn controls and screens. I wanted to know what could be the reason behind it, is it normal for MAC? Here is a self-constrained script which replicates the scenario using timers. It keeps on printing "on paint" every 500ms because in timer I set title every 500ms. import wx app = wx.PySimpleApp() frame = wx.Frame(None, title="BasePainter Test") painter = wx.Panel(frame) def onPaint(event): dc = wx.PaintDC(painter) print "onPaint" painter.Bind(wx.EVT_PAINT, onPaint) def loop(): frame.SetTitle(frame.GetTitle()) wx.CallLater(500, loop) loop() frame.Show(True) app.SetTopWindow(frame) app.MainLoop() My system details: >>> sys.version '2.5 (r25:51918, Sep 19 2006, 08:49:13) \n[GCC 4.0.1 (Apple Computer, Inc. build 5341)]' >>> wx.VERSION (2, 8, 10, 1, '') >>> os.uname() ('Darwin', 'agyeys-mac-mini.local', '9.8.0', 'Darwin Kernel Version 9.8.0: Wed Jul 15 16:55:01 PDT 2009; root:xnu-1228.15.4~1/RELEASE_I386', 'i386')

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• Troubles Iterating Over A HashMap with JSF, MyFaces & Facelets

  - by Lee Theobald

  Hi all, I'm having some trouble looping over a HashMap to print out it's values to the screen. Could someone double check my code to see what I'm doing wrong. I can't seem to find anything wrong but there must be something. In a servlet, I am adding the following to the request: Map<String, String> facetValues = new HashMap<String, String>(); // Filling the map req.setAttribute(facetField.getName(), facetValues); In one case "facetField.getName()" evaluates to "discipline". So in my page I have the following: <ui:repeat value="${requestScope.discipline}" var="item"> <li>Item: <c:out value="${item}"/>, Key: <c:out value="${item.key}"/>, Value: <c:out value="${item.item}"/></li> </ui:repeat> The loop is ran once but all the outputs are blank?!? I would have at least expected something in item if it's gone over the loop once. Checking the debug popup for Facelets, discipline is there and on the loop. Printing it to the screen results in something that looks like a map to me (I've shortened the output) : {300=0, 1600=0, 200=0, ... , 2200=0} I've also tried with a c:forEach but I'm getting the same results. So does anyone have any ideas where I'm going wrong? Thanks for any input, Lee

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• How to write a decent process filter?

  - by konr

  Hi there, I'm building a program that communicates with Emacs, and one of the challenges I'm facing is writing Emacs's process filter function. Its input string is a series of s-expressions to be evaluated. Here is a sample: (gimme-append-to-buffer "25 - William Christie dir, Les Arts Florissants - Scene 2. Prelude - Les Arts Florissants\n") (gimme-append-to-buffer "26 - William Christie dir, Les Arts Florissants - Cybele: 'Je Veux Joindre' - Les Arts Florissants\n") (gimme-append-to-buffer "27 - William Christie dir, Les Arts Florissants - Scene 3. Cybele: 'Tu T'Etonnes, Melisse' - Les Arts Florissants\n") (gimme-append-to-buffer "28 - William Christie dir, Les Arts Florissants - Cybele: 'Que Les Plus Doux Zephyrs'. Scene 4. - Les Arts Florissants\n") (gimme-append-to-buffer "29 - William Christie dir, Les Arts Florissants - Entree Des Nations - Les Arts Florissants\n") (gimme-append-to-buffer "30 - William Christie dir, Les Arts Florissants - Entree Des Zephyrs - Les Arts Florissants\n") (gimme-append-to-buffer "31 - William Christie dir, Les Arts Florissants - Choeur Des Nations' 'Que Devant Vous' - Les Arts Florissants\n") (gimme-append-to-buffer "32 - William Christie dir, Les Arts Florissants - Atys: 'Indigne Que Je Suis' - Les Arts Florissants\n") (gimme-append-to-buffer "33 - William Christie dir, Les Arts Florissants - Reprise Du Choeur Des Nations : 'Que Devant Nous' - Les Arts Florissants\n") (gimme-append-to-buffer "34 - William Christie dir, Les Arts Flor*emphasized text*issants - Reprise De L'Air Des Zephyrs - Les Arts Florissants\n") The first problem that I've faced is that the string is somehow not fully formed when the function is so called, so writing something like (mapcar 'eval (format "(%s)" input-string)) won't work. To deal with this first problem, I was using a loop. The full function I wrote is: (defun eval-all-sexps (s) (loop for x = (ignore-errors (read-from-string s)) then (ignore-errors (read-from-string (substring s position))) while x summing (or (cdr x) 0) into position doing (eval (car x)))) Now the second problem that showed up is that the function is called twice with a somewhat large input, first with valid but partial content, then with what looks like pieces of the remaining data. To solve this problem, I'm considering using a junk variable to hold up what remains from a loop and then concatenating it to the input of the next call, but I was wondering if you guys have any other suggestions on how to deal with such a problem more elegantly. Thanks!

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• Clojure agents consuming from a queue

  - by erikcw

  I'm trying to figure out the best way to use agents to consume items from a Message Queue (Amazon SQS). Right now I have a function (process-queue-item) that grabs an items from the queue, and processes it. I want to process these items concurrently, but I can't wrap my head around how to control the agents. Basically I want to keep all of the agents busy as much as possible without pulling to many items from the Queue and developing a backlog (I'll have this running on a couple of machines, so items need to be left in the queue until they are really needed). Can anyone give me some pointers on improving my implementation? (def active-agents (ref 0)) (defn process-queue-item [_] (dosync (alter active-agents inc)) ;retrieve item from Message Queue (Amazon SQS) and process (dosync (alter active-agents dec))) (defn -main [] (def agents (for [x (range 20)] (agent x))) (loop [loop-count 0] (if (< @active-agents 20) (doseq [agent agents] (if (agent-errors agent) (clear-agent-errors agent)) ;should skip this agent until later if it is still busy processing (not sure how) (send-off agent process-queue-item))) ;(apply await-for (* 10 1000) agents) (Thread/sleep 10000) (logging/info (str "ACTIVE AGENTS " @active-agents)) (if (> 10 loop-count) (do (logging/info (str "done, let's cleanup " count)) (doseq [agent agents] (if (agent-errors agent) (clear-agent-errors agent))) (apply await agents) (shutdown-agents)) (recur (inc count)))))

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• Returning from dll (Asynchronous sockets)

  - by Juha

  I am trying to do a simple http-server in (c++) dll-file that I can use from managed (C#) application with P/Invoke. I was trying to do this with asynchronous functions (WSAAsyncSelect() and stuff), so that I could manage server by calling functions inside dll whenever needed and after that it would return to my main program. Now I'm not sure if that is even possible. It seems that "main function" in dll, the function that starts the server, has to include message loop or something and since it's a loop, it doesn't return from dll ever. Could I somehow do this message stuff in my managed application and call some function in dll when there is something to do? Or is it even possible to do this stuff in one thred? I would really like to avoid all concurrency stuff. The dll looks now basicly the same as here, main function is the one that I call from managed C# program and would like to return to there after calling the function. http://www.winsocketdotnetworkprogramming.com/winsock2programming/winsock2advancediomethod5b.html I'm quite noob in windows programming, and never even heard of this message-queue or message-loop.

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• F#: Tell me what I'm missing about using Async.Parallel

  - by JBristow

  ok, so I'm doing ProjectEuler Problem #14, and I'm fiddling around with optimizations in order to feel f# out. in the following code: let evenrule n = n / 2L let oddrule n = 3L * n + 1L let applyRule n = if n % 2L = 0L then evenrule n else oddrule n let runRules n = let rec loop a final = if a = 1L then final else loop (applyRule a) (final + 1L) n, loop (int64 n) 1L let testlist = seq {for i in 3 .. 2 .. 1000000 do yield i } let getAns sq = sq |> Seq.head let seqfil (a,acc) (b,curr) = if acc = curr then (a,acc) else if acc < curr then (b,curr) else (a,acc) let pmap f l = seq { for a in l do yield async {return f a} } |> Seq.map Async.RunSynchronously let pmap2 f l = seq { for a in l do yield async {return f a} } |> Async.Parallel |> Async.RunSynchronously let procseq f l = l |> f runRules |> Seq.reduce seqfil |> fst let timer = System.Diagnostics.Stopwatch() timer.Start() let ans1 = testlist |> procseq Seq.map // 837799 00:00:08.6251990 printfn "%A\t%A" ans1 timer.Elapsed timer.Reset() timer.Start() let ans2 = testlist |> procseq pmap printfn "%A\t%A" ans2 timer.Elapsed // 837799 00:00:12.3010250 timer.Reset() timer.Start() let ans3 = testlist |> procseq pmap2 printfn "%A\t%A" ans3 timer.Elapsed // 837799 00:00:58.2413990 timer.Reset() Why does the Async.Parallel code run REALLY slow in comparison to the straight up map? I know I shouldn't see that much of an effect, since I'm only on a dual core mac. Please note that I do NOT want help solving problem #14, I just want to know what's up with my parallel code.

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• Niewbie OutOfMemory problem

  - by Nick

  So I am trying to create a producer/consumer type scala app. The LoopControl just sends a message to the MessageReceiver continoually. The MessageReceiver then delegates work to the MessageCreatorActor (whose work is to check a map for an object, and if not found create one and start it up). Each MessageActor created by this MessageCreatorActor is associated with an Id. Eventually this is where I want to do business logic. But I run out of memory after 15 minutes. Any help is appreciated import scala.actors.Actor import java.util.HashMap; import scala.actors.Actor._ case object LoopControl case object MessageReceiver case object MessageActor case object MessageActorCreator class MessageReceiver(msg: String) extends Actor { var messageActorMap = new HashMap[String, MessageActor] val messageCreatorActor = new MessageActorCreator(null, null) def act() { messageCreatorActor.start loop { react { case MessageActor(messageId) = if (msg.length() 0) { var messageActor = messageActorMap.get(messageId); if(messageActor == null) { messageCreatorActor ! MessageActorCreator(messageId, messageActorMap) }else { messageActor ! MessageActor } } } } } } case class MessageActorCreator(msg:String, messageActorMap: HashMap[String, MessageActor]) extends Actor { def act() { loop { react { case MessageActorCreator(messageId, messageActorMap) = if(messageId != null ) { var messageActor = new MessageActor(messageId); messageActorMap.put(messageId, messageActor) println(messageActorMap) messageActor.start messageActor ! MessageActor } } } } } class LoopControl(messageReceiver:MessageReceiver) extends Actor { var count : Int = 0; def act() { while (true) { messageReceiver ! MessageActor ("00-122-0X95-FEC0" + count) //Thread.sleep(100) count = count +1; if(count 5) { count = 0; } } } } case class MessageActor(msg: String) extends Actor { def act() { loop { react { case MessageActor = println() println("MessageActor: Got something- " + msg) } } } } object messages extends Application { val messageReceiver = new MessageReceiver("bootstrap") val loopControl = new LoopControl(messageReceiver) messageReceiver.start loopControl.start }

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• How to avoid game rendering component circular references?

  - by CodexArcanum

  I'm working on a simple game design, and I wanted to break up my game objects into more reusable components. But I'm getting stuck on how exactly to implement the design I have in mind. Here's an example: I have a Logger object, whose job is simply to store a list of messages and render them to screen. You know, logging. Originally the Logger just held the list, and the game loop rendered it's contents. Then I moved the rendering logic into the Logger.Draw() method, and now I want to move it further into a LoggerRenderer object. In effect, I want to have the game loop call RenderAll, which will then call Logger.Render, which will in turn call the LoggerRenderer.Render and finally output the text. So the Logger needs to contain a Renderer object, but the Renderer needs access to the Logger's state (the message queue) in order to render. How do I resolve that? Should I be passing in the message queue and other state information explicitly to the Render method? Or should the game loop be calling the Renderer directly and it links back to the logger, but the RenderAll method never actually sees the logger object itself? This feels kind of like Command pattern, but I'm botching it up terribly.

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• Looping HTML5 audio on the iPhone

  - by Peeps

  I'm trying to make a HTML5 webapp that simply plays a sound over and over and over again, on my iPhone. I don't know any Obj-C to do it natively. What I have works fine, but the sound only plays once: <!DOCTYPE html> <html> <head> <title>noisemaker!</title> <meta http-equiv="content-type" content="text/html; charset=utf-8" /> <meta name="viewport" content="maximum-scale=1, minimum-scale=1, width=device-width, user-scalable=no" /> <meta name="apple-mobile-web-app-capable" content="yes" /> </head> <body> <audio src="noise.mp3" autoplay controls loop></audio> </body> </html> Is there a way to either bypass the QuickTime audio screen and loop it in the webpage, or get the QuickTime audio screen to loop the sound?

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• Mysqli results memory usage

  - by Poe

  Why is the memory consumption in this query continuing to rise as the internal pointer progresses through loop? How to make this more efficient and lean? $link = mysqli_connect(...); $result = mysqli_query($link,$query); // 403,268 rows in result set while ($row = mysqli_fetch_row($result)) { // print time, (get memory usage), -- row number } mysqli_free_result(); mysqli_close($link); /* 06:55:25 (1240336) -- Run query 06:55:26 (39958736) -- Query finished 06:55:26 (39958784) -- Begin loop 06:55:26 (39960688) -- Row 0 06:55:26 (45240712) -- Row 10000 06:55:26 (50520712) -- Row 20000 06:55:26 (55800712) -- Row 30000 06:55:26 (61080712) -- Row 40000 06:55:26 (66360712) -- Row 50000 06:55:26 (71640712) -- Row 60000 06:55:26 (76920712) -- Row 70000 06:55:26 (82200712) -- Row 80000 06:55:26 (87480712) -- Row 90000 06:55:26 (92760712) -- Row 100000 06:55:26 (98040712) -- Row 110000 06:55:26 (103320712) -- Row 120000 06:55:26 (108600712) -- Row 130000 06:55:26 (113880712) -- Row 140000 06:55:26 (119160712) -- Row 150000 06:55:26 (124440712) -- Row 160000 06:55:26 (129720712) -- Row 170000 06:55:27 (135000712) -- Row 180000 06:55:27 (140280712) -- Row 190000 06:55:27 (145560712) -- Row 200000 06:55:27 (150840712) -- Row 210000 06:55:27 (156120712) -- Row 220000 06:55:27 (161400712) -- Row 230000 06:55:27 (166680712) -- Row 240000 06:55:27 (171960712) -- Row 250000 06:55:27 (177240712) -- Row 260000 06:55:27 (182520712) -- Row 270000 06:55:27 (187800712) -- Row 280000 06:55:27 (193080712) -- Row 290000 06:55:27 (198360712) -- Row 300000 06:55:27 (203640712) -- Row 310000 06:55:27 (208920712) -- Row 320000 06:55:27 (214200712) -- Row 330000 06:55:27 (219480712) -- Row 340000 06:55:27 (224760712) -- Row 350000 06:55:27 (230040712) -- Row 360000 06:55:27 (235320712) -- Row 370000 06:55:27 (240600712) -- Row 380000 06:55:27 (245880712) -- Row 390000 06:55:27 (251160712) -- Row 400000 06:55:27 (252884360) -- End loop 06:55:27 (1241264) -- Free */

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• addNotify not works allright

  - by joseph

  Hello. I call addNotify() method in class that I posted here. The problem is, that when I call addNotify() as it is in the code, setKeys(objs) do nothing. Nothing appears in my explorer of running app. But when I call addNotify()without loop(for int....), and add only one item to ArrayList, it shows that one item correctly. Does anybody knows where can be problem? See the cede class ProjectsNode extends Children.Keys{ private ArrayList objs = new ArrayList(); public ProjectsNode() { } @Override protected Node[] createNodes(Object o) { MainProject obj = (MainProject) o; AbstractNode result = new AbstractNode (new DiagramsNode(), Lookups.singleton(obj)); result.setDisplayName (obj.getName()); return new Node[] { result }; } @Override protected void addNotify() { //this loop causes nothing appears in my explorer. //but when I replace this loop by single line "objs.add(new MainProject("project1000"));", it shows that one item in explorer for (int i=0;i==10;i++){ objs.add(new MainProject("project1000")); } setKeys (objs); } }

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• Drupal theme preprocess function - primary links

  - by slimcady

  I recently wrote a theme function to add a class to my primary links that works great. I then wrote some css classes to style these links with custom background images. Worked out great. Now comes the problem, the link text for the primary links still is displayed. Normally this isn't a problem as I would just wrap the in a with a custom "hide" class. For example: <span class="hide"><a href="#">Link Text</a></span> So my question is how can I loop through the primary links and wrap the text w/ a <span> like my example? Here's my theme function that I used to add my classes. function zkc_preprocess_page(&$vars, $hook) { // Make a shortcut for the primary links variables $primary_links = $vars['primary_links']; // Loop thru the menu, adding a new class for CSS selectors $i = 1; foreach ($primary_links as $link => $attributes){ // Append the new class to existing classes for each menu item $class = $attributes['attributes']['class'] . " item-$i"; // Add revised classes back to the primary links temp variable $primary_links[$link]['$attributes']['class'] = $class; $i++; } // end the foreach loop // reset the variable to contain the new markup $vars['primary_links'] = $primary_links; }

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• Measuring execution time of selected loops

  - by user95281

  I want to measure the running times of selected loops in a C program so as to see what percentage of the total time for executing the program (on linux) is spent in these loops. I should be able to specify the loops for which the performance should be measured. I have tried out several tools (vtune, hpctoolkit, oprofile) in the last few days and none of them seem to do this. They all find the performance bottlenecks and just show the time for those. Thats because these tools only store the time taken that is above a threshold (~1ms). So if one loop takes lesser time than that then its execution time won't be reported. The basic block counting feature of gprof depends on a feature in older compilers thats not supported now. I could manually write a simple timer using gettimeofday or something like that but for some cases it won't give accurate results. For ex: for (i = 0; i < 1000; ++i) { for (j = 0; j < N; ++j) { //do some work here } } Now here I want to measure the total time spent in the inner loop and I will have to put a call to gettimeofday inside the first loop. So gettimeofday itself will get called a 1000 times which introduces its own overhead and the result will be inaccurate.

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• How to set QNetworkReply properties to get correct NCBI pages?

  - by Claire Huang

  I try to get this following url using the downloadURL function: http://www.ncbi.nlm.nih.gov/nuccore/27884304 But the data is not as what we can see through the browser. Now I know it's because that I need to give the correct information such as browser, how can I know what kind of information I need to set, and how can I set it? (By setHeader function??) In VC++, we can use CInternetSession and CHttpConnection Object to get the correct information without setting any other detail information, is there any similar way in Qt or other cross-platform C++ network lib?? (Yes, I need the the cross-platform property.) QNetworkReply::NetworkError downloadURL(const QUrl &url, QByteArray &data) { QNetworkAccessManager manager; QNetworkRequest request(url); request.setHeader(QNetworkRequest::ContentTypeHeader ,"Mozilla/5.0 (Windows; U; Windows NT 6.0; en-US; rv:1.9.1.7) Gecko/20091221 Firefox/3.5.7 (.NET CLR 3.5.30729)"); QNetworkReply *reply = manager.get(request); QEventLoop loop; QObject::connect(reply, SIGNAL(finished()), &loop, SLOT(quit())); loop.exec(); QVariant statusCodeV = reply->attribute(QNetworkRequest::RedirectionTargetAttribute); QUrl redirectTo = statusCodeV.toUrl(); if (!redirectTo.isEmpty()) { if (redirectTo.host().isEmpty()) { const QByteArray newaddr = ("http://"+url.host()+redirectTo.encodedPath()).toAscii(); redirectTo.setEncodedUrl(newaddr); redirectTo.setHost(url.host()); } return (downloadURL(redirectTo, data)); } if (reply->error() != QNetworkReply::NoError) { return reply->error(); } data = reply->readAll(); delete reply; return QNetworkReply::NoError; }

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• jQuery event handling with .live() problem with setInterval and clearInterval

  - by Kyle Lafkoff

  jQuery 1.4.2: I have an image. When the mouseover event is triggered, a function is executed that runs a loop to load several images. On the contrary, the mouseout event needs to set the image back to a predetermined image and no longer have the loop executing. These are only for the images with class "thumb": $("img.thumb").live("mouseover mouseout", function(event) { var foo = $(this).attr('id'); var wait; var i=0; var image = document.getElementById(foo); if (event.type == 'mouseover') { function incrementimage() { i++; image.src = 'http://example.com/images/file_'+i+'.jpg'; if(i==30) {i=0;} } wait = setInterval(incrementimage,500); } else if (event.type == 'mouseout') { clearInterval (wait); image.src = 'http://example.com/images/default.jpg'; } return false; }); When I mouseout, the image is set to the default.jpg but the browser continues to loop though the images. It will never stop. Can someone hit me with some knowledge? Thanks.

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