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  • How do you sort files numerically?

    - by Zachary Young
    Hello all, First off, I'm posting this because when I was looking for a solution to the problem below, I could not find one on stackoverflow. So, I'm hoping to add a little bit to the knowledge base here. I need to process some files in a directory and need the files to be sorted numerically. I found some examples on sorting--specifically with using the lamba pattern--at wiki.python.org, and I put this together: #!env/python import re tiffFiles = """ayurveda_1.tif ayurveda_11.tif ayurveda_13.tif ayurveda_2.tif ayurveda_20.tif ayurveda_22.tif""".split('\n') numPattern = re.compile('_(\d{1,2})\.', re.IGNORECASE) tiffFiles.sort(cmp, key=lambda tFile: int(numPattern.search(tFile).group(1))) print tiffFiles I'm still rather new to Python and would like to ask the community if there are any improvements that can be made to this: shortening the code up (removing lambda), performance, style/readability? Thank you, Zachary

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  • Ruby Rack: startup and teardown operations (Tokyo Cabinet connection)

    - by clint.tseng
    I have built a pretty simple REST service in Sinatra, on Rack. It's backed by 3 Tokyo Cabinet/Table datastores, which have connections that need to be opened and closed. I have two model classes written in straight Ruby that currently simply connect, get or put what they need, and then disconnect. Obviously, this isn't going to work long-term. I also have some Rack middleware like Warden that rely on these model classes. What's the best way to manage opening and closing the connections? Rack doesn't provide startup/shutdown hooks as I'm aware. I thought about inserting a piece of middleware that provides reference to the TC/TT object in env, but then I'd have to pipe that through Sinatra to the models, which doesn't seem efficient either; and that would only get be a per-request connection to TC. I'd imagine that per-server-instance-lifecycle would be a more appropriate lifespan. Thanks!

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  • rubygem "Argument list too long"

    - by mehmermaid
    My problem is that during or after running a process which uses Ruby intensively, when I use any gem command including gem --version or gem install rake, it hangs for just over a minute and then gives me this error: $ gem list /Users/username/.rvm/bin/gem: line 5: /Users/username/.rvm/bin/gem: Argument list too long /Users/username/.rvm/bin/gem: line 5: /Users/username/.rvm/bin/gem: Unknown error: 0 file at : line 5: /Users/username/.rvm/bin/gem #!/usr/bin/env bash if [[ -s "/Users/username/.rvm/environments/ruby-1.8.7-p334" ]] ; then source "/Users/username/.rvm/environments/ruby-1.8.7-p334" exec gem "$@" # this is line 5 else echo "ERROR: Missing RVM environment file: '/Users/username/.rvm/environments/ruby- 1.8.7-p334'" >&2 exit 1 fi The only way that I have found to get this working again is to restart my computer, which is obviously undesirable. I am using OSX 10.6.5 I have spent quite a while trying to find anyone else who has had this problem, and been unsuccessful. Do you have any idea why this might be happening?

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  • Programatically Determining Bin Path

    - by Andy
    I'm working on a web app called pj and there is a bin file and a src folder. The relative paths before I deploy the app will look something like: pj/bin and pj/src/pj/script.py. However, after deployment, the relative paths will look like: pj_dep/deployed/bin and pj_dep/deployed/lib/python2.6/site-packages/pj/script.py Question: Within script.py, I am trying to find the path of a file in the bin directory. This leads to 2 different behaviors in the dev and deployment environment. If I do os.path.join(os.path.dirname(__file__), 'bin') to try to get the path for the dev environment, I will have a different path for the deployment environment. Is there a more generalized way I can find the bin directory so that I do not need to rely on an if statement to determine how many directories to go up based on the current env? This doesn't seem flexible and might cause other issues later on when the code is moved.

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  • Unable to run OpenMPI across more than two machines

    - by rcollyer
    When attempting to run the first example in the boost::mpi tutorial, I was unable to run across more than two machines. Specifically, this seemed to run fine: mpirun -hostfile hostnames -np 4 boost1 with each hostname in hostnames as <node_name> slots=2 max_slots=2. But, when I increase the number of processes to 5, it just hangs. I have decreased the number of slots/max_slots to 1 with the same result when I exceed 2 machines. On the nodes, this shows up in the job list: <user> Ss orted --daemonize -mca ess env -mca orte_ess_jobid 388497408 \ -mca orte_ess_vpid 2 -mca orte_ess_num_procs 3 -hnp-uri \ 388497408.0;tcp://<node_ip>:48823 Additionally, when I kill it, I get this message: node2- daemon did not report back when launched node3- daemon did not report back when launched The cluster is set up with the mpi and boost libs accessible on an NFS mounted drive. Am I running into a deadlock with NFS? Or, is something else going on?

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  • Using Interfaces in JNI

    - by lhw
    I am trying to use (*env)->RegisterNatives to add methods to a defined class which I then add to a callback list. The callback sender of course expects my class to implement a certain interface which I do not. And is failing on execution. If I add the keyword "implements Listener" to my class in Java the javac expects to have the methods definition in Java or with native keyword which I try to avoid here, as I'd like to register the methods within the JNI_OnLoad and execute one of them afterwards. The question now is: Can I implement the interface in JNI or avoid the error message in Java?

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  • Why isn't Passenger respecting my custom log format?

    - by Millisami
    I need to change the log format of my rails app. I put this file in lib directory and required it in development.rb env file. require 'hodel_3000_compliant_logger' config.logger = Hodel3000CompliantLogger.new(config.log_path) and I should get the output of the development.log file as follows: Jun 28 03:05:13 millisami-notebook rails[18243]: Memory usage: 86888 | PID: 18243 I get this exact log when I start my app with script/server (Mongrel). But when I run the app via Passenger, the format being logged is Rails' default. Why doesn't Passenger write to the log file like Mongrel does?

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  • Nant task sysinfo verbose - fails

    - by Broken Link
    Nant.core.dll : 0.86.2898.0 I can not get the following tag working on my machine. <sysinfo verbose="true" /> <sysinfo /> It gives me the following error. If I comment out those two lines I'm able to build. I google'd but not much help. Any idea? NAnt 0.85 (Build 0.85.1932.0; rc3; 4/16/2005) Copyright (C) 2001-2005 Gerry Shaw http://nant.sourceforge.net Buildfile: file:///C:/xyz/source/Default.build Target framework: Microsoft .NET Framework 1.1 Target(s) specified: all [tstamp] Thursday, July 30, 2009 3:10:24 PM. [sysinfo] Setting system information properties under sys.* BUILD FAILED Property name 'sys.env.Zen Managed Workstation' is invalid. Total time: 0 seconds.

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  • jstring to L_TCHAR* format

    - by Ayusman
    Hi All, I have been trying to call a C function that has the following signature int changeFoo(L_TCHAR* pszFileSrc){....} in my JNI call my method looks like this: JNIEXPORT jint JNICALL Java_com_me_L_AFoo (JNIEnv * env, jclass jclass, jstring pSrc) { jint retValue = -100; retValue = changeFoo(pSrc); return retValue; } I get the following error in visual studio. Error 1 error C2664: 'L_FileConvert' : cannot convert parameter 1 from 'jstring' to 'L_TCHAR *' c:\Ayusman\Work\MyVCpp\LTExampleDll\LTExampleDll\LTExampleMain.cpp 46 LTExampleDll When I looked at the definition of L_TCHAR * here is what I got in the header files (in that sequence): typedef TCHAR L_TCHAR; typedef WCHAR TCHAR,*PTCHAR; typedef wchar_t WCHAR; //wc, 16 bit UNICODE char I work on java, this is a JNI application that I am trying to build. Can any body help as to how can I convert this properly? Thanks, Ayusman

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  • Initializing Multidimentional Arrays

    - by Eddy Freeman
    Hi Guy, I have a 3-multidimentional array : int[][][] env; which i would like to initialize with data in a text file. The data in the text file looks like this: { { { 0, 1,-1}, { 0, 2,-1}, {-1,-1,-2}, { 0, 0, 0} }, { { 0, 0,-1}, { 0, 0,-1}, {-1,-1,-2}, { 0, 0, 0} } } Actually the accolades can be removed and replaced with different characters if it is necessary. If there are any better way to format the values in the text file, then it is welcomed. I am looking for the best way to initialize the array in the java program with the values from the text file. All your help is appreciated. Thanks.

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  • 'script/console test' with spork and rspec not loading the whole environment?

    - by TheDeeno
    I'm trying to load up console to interact with some of my rspec mocking helpers. I expected that running script/console test would load an env similar to when I run spec. However, this doesn't appear to be the case. It looks like spec_helper is never loaded. Or, if it is, it's not actually running through the logic because spork has polluted it a bit. In short, is there a quick and easy way to get an interactive rspec party going?

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  • iPad: CoreData FetchedRequest Ignores Changes in Predicate

    - by Michael
    Hi there, While programming an iPad-app, I'm just running into trouble using a fetchedResultsController with a "dynamic" predicate. it seems the changes to the predicate get ignored. No matter how the predicate changes, I always get the result of the first fetch ... same code runs without no problems on iphone-env (3.1.x) !! sample : - (void)performSearch:(NSString *)searchText { self.displaySearchResults = TRUE; NSPredicate *predicate = [NSPredicate predicateWithFormat:@"searchWords contains[cd] %@", searchText]; [self.fetchedSearchResultsController.fetchRequest setPredicate:predicate]; NSError *error = nil; if (![self.fetchedSearchResultsController performFetch:&error]) { NSLog(@"Unresolved error %@, %@", error, [error userInfo]); abort(); } if(deviceIsIPad) { [self showSearchResults]; } else { [cookBookOverview reloadData]; } } can anyone help plz ? btw.: excuse my painful english ;-)

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  • Loop over a file and write the next line if a condition is met

    - by 111078384259264152964
    Having a hard time fixing this or finding any good hints about it. I'm trying to loop over one file, modify each line slightly, and then loop over a different file. If the line in the second file starts with the line from the first then the following line in the second file should be written to a third file. !/usr/bin/env python with open('ids.txt', 'rU') as f: with open('seqres.txt', 'rU') as g: for id in f: id=id.lower()[0:4]+'_'+id[4] with open(id + '.fasta', 'w') as h: for line in g: if line.startswith(''+ id): h.write(g.next()) All the correct files appear, but they are empty. Yes, I am sure the if has true cases. :-) "seqres.txt" has lines with an ID number in a certain format, each followed by a line with data. The "ids.txt" has lines with the ID numbers of interest in a different format. I want each line of data with an interesting ID number in its own file. Thanks a million to anyone with a little advice!

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  • Problem running gems in OS X

    - by akarnid
    I'm running Snow Leopard, and installed a custom built Ruby according to the guide here: http://hivelogic.com/articles/compiling-ruby-rubygems-and-rails-on-snow-leopard . My ruby binary lives in usr/local/bin/ruby and my gems are installed in /usr/local/bin/gem . My gem env looks like so: RUBY VERSION: 1.8.7 (2008-08-11 patchlevel 72) [universal-darwin10.0] - INSTALLATION DIRECTORY: /Library/Ruby/Gems/1.8 - RUBY EXECUTABLE: /System/Library/Frameworks/Ruby.framework/Versions/1.8/usr/bin/ruby - EXECUTABLE DIRECTORY: /usr/bin I think I may have borked the install since all actions taked on gems give the error: ERROR: While executing gem ... (Errno::EEXIST) File exists - /usr/local/bin/ruby How do you edit the environment variables for the gem environment? And for those of you on OS X and using ruby AND gems, what did you use to get yourself up and running? I'm thinking of just nuking everything and starting anew.

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  • Grails deploy on Tomcat6

    - by Jack
    Hello, while trying to deploy a Grails application into tomcat6 I ran into some problems: I used the grails war command to build up a war, then copied it to var/lib/tomcat6/webapps and tried to restart the container. I had to change default Tomcat policy to skip security exceptions, since I couldn't access environment variable (like grails.env), then tried again but it gives me an exception related to instantiating something, but it's not clear where should I try to fix the error, according to tomcat6 logs the problem is: SEVERE: Exception sending context initialized event to listener instance of class org.codehaus.groovy.grails.web.context.GrailsC$ org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'pluginManager' defined in ServletContext$ at java.lang.Thread.run(Thread.java:619) Caused by: org.codehaus.groovy.grails.exceptions.NewInstanceCreationException: Could not create a new instance of class [Hiberna$ ... 1 more Caused by: java.lang.NoClassDefFoundError: org.hibernate.cfg.Environment It seems like it's unable to load org.hibernate.cfg.Environment class. I checked the applicationContext.xml and it refers to grails.xml to search for plugins, in this last file I actually have HibernateGrailsPlugin. Where should I look to find if the plugin is present?

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  • match elements from two files, how to write the intended format to a new file

    - by user2489612
    I am trying to update my text file by matching the first column to another updated file's first column, after match it, it will update the old file. Here is my old file: Name Chr Pos ind1 in2 in3 ind4 foot 1 5 aa bb cc ford 3 9 bb cc 00 fake 3 13 dd ee ff fool 1 5 ee ff gg fork 1 3 ff gg ee Here is the new file: Name Chr Pos foot 1 5 fool 2 5 fork 2 6 ford 3 9 fake 3 13 The updated file will be like: Name Chr Pos ind1 in2 in3 ind4 foot 1 5 aa bb cc fool 2 5 ee ff gg fork 2 6 ff gg ee ford 3 9 bb cc 00 fake 3 13 dd ee ff Here is my code: #!/usr/bin/env python import sys inputfile_1 = sys.argv[1] inputfile_2 = sys.argv[2] outputfile = sys.argv[3] inputfile1 = open(inputfile_1, 'r') inputfile2 = open(inputfile_2, 'r') outputfile = open(outputfile, 'w') ind = inputfile1.readlines() cm = inputfile2.readlines()[1:] outputfile.write(ind[0]) #add header for i in ind: i = i.split() for j in cm: j = j.split() if j[0] == i[0]: outputfile.writelines(j[0:3] + i[3:]) inputfile1.close() inputfile2.close() outputfile.close() When I ran it, it returned a single column rather than the format i wanted, any suggestions? Thanks!

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  • Missing nativeInit when compiling multimple files

    - by RankoR
    Android.mk: LOCAL_PATH := $(call my-dir) include $(CLEAR_VARS) LOCAL_MODULE := pacman LOCAL_SRC_FILES := main.cpp \ Pacman.cpp LOCAL_CFLAGS := -DANDROID_NDK \ -DDISABLE_IMPORTGL LOCAL_LDLIBS := -lGLESv1_CM -ldl -llog include $(BUILD_SHARED_LIBRARY) In main.cpp: void Java_com_wiagames_pacman_PacmanRenderer_nativeInit(JNIEnv* env) { ... } The package is com.wiagames.pacman; The Java class, containing the nativeInit method, is PacmanRenderer in the com.wiagames.pacman package. It works fine before I added pacman.cpp, but after adding it I have: E/AndroidRuntime( 2238): FATAL EXCEPTION: GLThread 1104 E/AndroidRuntime( 2238): java.lang.UnsatisfiedLinkError: Native method not found: com.wiagames.pacman.PacmanRenderer.nativeInit:()V E/AndroidRuntime( 2238): at com.wiagames.pacman.PacmanRenderer.nativeInit(Native Method) E/AndroidRuntime( 2238): at com.wiagames.pacman.PacmanRenderer.onSurfaceCreated(MainActivity.java:120) E/AndroidRuntime( 2238): at android.opengl.GLSurfaceView$GLThread.guardedRun(GLSurfaceView.java:1494) E/AndroidRuntime( 2238): at android.opengl.GLSurfaceView$GLThread.run(GLSurfaceView.java:1240) W/ActivityManager( 306): Force finishing activity com.wiagames.pacman/.MainActivity main.c: http://pastebin.com/GPexqwcv MainActivity.java: http://pastebin.com/yWfWpyNb

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  • importing CELERY* environment variables in django settings.py causes celeryd not to start

    - by Taras
    I just spent 2 hours trying to figure out why django celery stopped working. Celery would being to start, but would stop short of printing out the configuration items, implying that it wasn't starting correct. The log would only contain The celery.decorators module along with the magic keyword arguments, are deprecated, and will be removed in version 3.0. Please use the celery.task module instead of celery.decorators, and the task.request should be used instead of the magic keyword arguments: from celery.task import task See http://bit.ly/celery22major for more information. """)) It turns out that some celery env variables that I was importing to try and fix a different problem were causing celery not to start correctly: from celery.tests.config import CELERY_QUEUES, CELERY_DEFAULT_QUEUE, CELERY_DEFAULT_ROUTING_KEY Even though I wasn't using them anywhere. Does anyone know what was happening?

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  • gem install cannot find a header file

    - by Milktrader
    Following along the github README for talib_ruby: sudo port install ta-lib Complete. Next is where the trouble begins. sudo env ARCHFLAGS="-arch PLATFORM" gem install talib_ruby -- --with-talib-include=ABSOLUTE_PATH_TO_TALIB_HEADERS --with-talib-lib=ABSOLUTE_PATH_TO_TALIB_LIBS This install fails I believe because apparently it cannot find the ta_abstract.h file talib.c:2:25: error: ta_abstract.h: No such file or directory . . . many more errors I have included in my .bash_profile file the following: export ABSOLUTE_PATH_TO_TALIB_HEADERS=/opt/local/var/macports/software/ta-lib/0.4.0_0/opt/local/include/ta-lib export ABSOLUTE_PATH_TO_TALIB_LIBS=/opt/local/var/macports/software/ta-lib/0.4.0_0/opt/local/lib And indeed the ta_abstract.h file is located where I'm saying in the ABSOLUTE_PATH variable assignment. What gives?

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  • How do I route watir through a proxy pragmatically?

    - by feydr
    I'm trying to route watir through a proxy pragmatically -- this means within the script I'd like to change my proxy dynamically before launching the browser. Here's what I've tried so far (and so far am failing): I'm running chrome and lucid lynx ubuntu. I chose TREX cause I thought watir might be making use of PROXY or something. I rewrote /usr/bin/google-chrome as: #!/bin/bash /opt/google/chrome/chrome --proxy-server="$TREX" $@ The reason I'm passing in the environment variable to proxy-server rather than http_proxy is because I never could get http_proxy to work as is anyways then I did a simple: require 'rubygems' require 'watir-webdriver' ENV['TREX'] = "XX.XX.XX.XX:YY" browser = Watir::Browser.new(:chrome) browser.goto("http://mysite.com") Anyways, what is happening here is that it is forwarding me to the login page of the proxy rather than just forwarding the request. What am I missing here? I feel like I'm pretty close.

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  • Configuring Warden for use in RSpec controller specs

    - by Chris Peters
    I was able to use Devise's sign_in method to log in a user in my controller specs. But now that I'm removing Devise from my application, I'm not quite sure how to get similar functionality working with just Warden on its own. How should I go about setting up spec/spec_helper.rb and related spec/support/*.rb files to get Warden running within controller specs sufficiently? I've tried setting up a file at spec/support/warden.rb with these contents: RSpec.configure do |config| config.include Warden::Test::Helpers config.after do Warden.test_reset! end end Then I have before calls similar to this to authenticate a user factory: before { login_as FactoryGirl.create(:user) } But here is the error that I keep seeing: NameError: undefined method `user' for nil:NilClass This error traces back to my authenticate_user! method in the controller: def authenticate_user! redirect_to login_path, notice: "You need to sign in or sign up before continuing." if env['warden'].user.nil? end I'd appreciate any guidance that anyone could provide.

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  • Xcodebuild failing to pick up environment values from project file?

    - by egrunin
    I'm using Xcode 3.2.6, MacOSX. I have a globally visible environment setting: ICU_SRC=~/Documents/icu/source This really is an environment setting, it's set at login time. When I open up Terminal, it's there. In my project, under Header Search Paths I've added this: $(ICU_SRC)/i18n $(ICU_SRC)/common These expand correctly when I compile inside the IDE. When I look at the build results, I see this: -I/Users/eric.grunin/Documents/icu/source/i18n -I/Users/eric.grunin/Documents/icu/source/common When I build from the command line, however, it fails. What I see is this: -I/i18n -I/common Here's the command I'm using to compile: /usr/bin/env -i xcodebuild -project my_project.xcodeproj -target "my_program" -configuration Release -sdk macosx10.6 build What am I doing wrong? Edited to add: Apple explains Setting environment variables for user processes

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  • Create SOAP message from WSDL using axiom

    - by code-gijoe
    Hi, I'm a starting a project which consist in sending a request to a web-service (which is already available) and parsing the response. I have the WSDL and URL endpoints. Does anyone have a startup tutorial on how to build something from there? I would like to use Axis2 + Axiom to send the service request and receive and process the response. I'm using eclipse as dev env. I've been search for a tut on how to do this but with no success. Any suggestion would be greatly appreciated!

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  • Best practise question

    - by sid_com
    Hello! With version would you prefer? #!/usr/bin/env perl use warnings; use strict; use 5.010; my $p = 7; # 33 my $prompt = ' : '; my $key = 'very important text'; my $value = 'Hello, World!'; my $length = length $key . $prompt; $p -= $length; Option 1: $key = $key . ' ' x $p . $prompt; Option 2: if ( $p > 0 ) { $key = $key . ' ' x $p . $prompt; } else { $key = $key . $prompt; } say "$key$value"

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  • JNI: Passing multiple parameters in the function signature for GetMethodID

    - by Jary
    I am trying to execute a function in Java (from C) that has the following signature: public void execute(int x, int y, int action); My problem is to define the function signature in GetMethodID: env->GetMethodID(hostClass, "execute", "(I;I;I;)V"); The problem I ma getting is: W/dalvikvm( 1849): Bogus method descriptor: (I;I;I;)V W/dalvikvm( 1849): Bogus method descriptor: (I;I;I;)V D/dalvikvm( 1849): GetMethodID: method not found: Lcom/device/client/HostConnection;.execute:(I;I;I;)V I am not sure how to specify the method signature in GetMethodID (for 3 integers as parameters). I saw people use the ";" to separate parameters in other posts for the String and File class, but nothing with primitives like integer. What would be the correct way to do this please? Thank you.

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