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• what changes when your input is giga/terabyte sized?

  - by Wang

  I just took my first baby step today into real scientific computing today when I was shown a data set where the smallest file is 48000 fields by 1600 rows (haplotypes for several people, for chromosome 22). And this is considered tiny. I write Python, so I've spent the last few hours reading about HDF5, and Numpy, and PyTable, but I still feel like I'm not really grokking what a terabyte-sized data set actually means for me as a programmer. For example, someone pointed out that with larger data sets, it becomes impossible to read the whole thing into memory, not because the machine has insufficient RAM, but because the architecture has insufficient address space! It blew my mind. What other assumptions have I been relying in the classroom that just don't work with input this big? What kinds of things do I need to start doing or thinking about differently? (This doesn't have to be Python specific.)

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• .net, C# Interface between Business Logic and DAL

  - by Joel

  I'm working on a small application from scratch and using it to try to teach myself architecture and design concepts. It's a .NET 3.5, WPF application, and I'm using Sql Compact Edition as my data store. I'm working on the business logic layer, and have just now begun to write the DAL. I'm just using SqlCeComamnds to send over simple queries and SqlCeResultSet to get at the results. I'm starting to design my Insert and Update methods, and here's the issue - I don't know the best way to get the necessary data from the BLL into the DAL. Do I pass in a generic collection? Do I have a massive parameter list with all the data for the database? Do I simply pass in the actual business object (thus tying my DAL to the conrete stuff in the BLL?). I thought about using interfaces - simply passing IBusinessObjectA into the DAL, which provides the simplicity I'm looking for without tying me TOO tightly to current implementations. What do you guys think?

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• Getting access to a custom Master page from a user control

  - by Bernard

  Hi We have created a Master page that inherits off the asp.net Master class. We have also got ui controls that inherit off the standard asp.net ui control class. Our Master page has a public member variable. We need to be able to access that member variable from the ui controls that we use. However we can't seem to get at it? Is it our architecture that is wrong? Or the idea itself - user control getting acces to Master page variables?

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• "Single NSMutableArray" vs. "Multiple C-arrays" --Which is more Efficient/Practical?

  - by RexOnRoids

  Situation: I have a DAY structure. The DAY structure has three variables or attributes: a Date (NSString*), a Temperature (float), and a Rainfall (float). Problem: I will be iterating through an array of about 5000 DAY structures and graphing a portion of these onto the screen using OpenGL. Question: As far as drawing performance, which is better? I could simply create an NSMutableArray of DAY structures (NSObjects) and iterate on the array on each draw call -- which I think would be hard on the CPU. Or, I could instead manually manage three different C-Arrays -- One for the Date String (2-Dimensional), One for the temperature (1-Dimensional) and One for the Rainfall (1-Dimensional). I could keep track of the current Day by referencing the current index of the iterated C-Arrays.

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• varnish invalidate url REGEX from backend

  - by ooouuiii

  Say I have some highly-visited front-page, which displays number of some items by categories. When some item is added / deleted I need to invalidate this front-page/url and some 2 others. What is the best practice how to invalidate those urls from backend in Varnish (4.x)? From what I captured, I can: implement my HTTP PURGE handler in VCL configuration file, that "bans" urls matching received regex from backend to Varnish, send 3x HTTP PURGE requests for those 3 urls. But is this approach safe for this automatic usage? Basicly I need to invalidate some views everytime some related entity is inserted/updated/deleted. Can it lead to ban list cumulation and increasing CPU consumption? Is there any other approach? Thanks.

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• How to share common css and other resources among grails projects?

  - by Troy

  I'm working on a grails-based web application that will be composed of a couple of different grails projects, each developed by a separate team, which will eventually all be unified under a common "portal." So they need to have the same look and feel, at least to some degree. Is there a "blessed" way to share resources like this among projects? Something using the grails plugin architecture maybe? Would it make sense to just create a separate lightweight project containing nothing but the css and any shared resources? How have the rest of you handled sharing things between different grails projects?

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• Efficiently remove points with same slope

  - by Ram

  Hi, In one of mine applications I am dealing with graphics objects. I am using open source GPC library to clip/merge two shapes. To improve accuracy I am sampling (adding multiple points between two edges) existing shapes. But before displaying back the merged shape I need to remove all the points between two edges. But I am not able to find an efficient algorithm that will remove all points between two edges which has same slope with minimum CPU utilization. Currently all points are of type PointF Any pointer on this will be a great help.

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• What alternatives are there to Google App Engine?

  - by Chris Marasti-Georg

  What alternatives are there to GAE, given that I already have a good bit of code working that I would like to keep. In other words, I'm digging python. However, my use case is more of a low number of requests, higher CPU usage type use case, and I'm worried that I may not be able to stay with App Engine forever. I have heard a lot of people talking about Amazon Web Services and other sorts of cloud providers, but I am having a hard time seeing where most of these other offerings provide the range of services (data querying, user authentication, automatic scaling) that App Engine provides. What are my options here?

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• Compiling zlib for 64 bit on windows

  - by Allan Hollenberg

  I am currently working on a cross-platform game for Mac OSX and Windows and I'm having some issues with the ZLib library on Windows 64 bit. My game is focussed on a 64 bit architecture and I am unable to get ZLib to work along with it. When I compile ZLib itself (through make all64 at the source directory of ZLib) it shows no issues but when I want to use it I get a error saying '/usr/local/lib/libz.a(gzread.o):gzread.c:(.text+0x28e): undefined reference to `__errno'' I have included errno.h before I include zlib.h in my project but that doesn't seem to matter. I am compiling my app through the cygwin64 terminal and using the x86_64-w64-mingw32-g++ command, I am also linking directly against the lib64 version (if I remove that it compiles correctly but crashes on running due to it having a x86 lib)

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• VS 2008 and F# Feb CTP - Can't debug

  - by Steve

  I have downloaded the VS2008 integrated shell, and the F# Feb CTP and I have the F# environment working just fine. The problem comes when I try to debug. Nothing happens at all. The output window says ------ Build started: Project: ConsoleApplication1, Configuration: Debug Any CPU ------ ========== Build: 1 succeeded or up-to-date, 0 failed, 0 skipped ========== and none of my breakpoints are hit. My "program" is as simple as can be #light open System printfn "Hello World" Console.ReadKey(true) with breakpoints on the printfn and Console lines. The things I've read seem to suggest that debugging would work with this setup, and there is a debugger folder under common7/packages with files in it. Thanks for any help. EDIT: I'm on Win7 64 bit

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• Which would be better? Storing/access data in a local text file, or in a database?

  - by TerranRich

  Basically, I'm still working on a puzzle-related website (micro-site really), and I'm making a tool that lets you input a word pattern (e.g. "r??n") and get all the matching words (in this case: rain, rein, ruin, etc.). Should I store the words in local text files (such as words5.txt, which would have a return-delimited list of 5-letter words), or in a database (such as the table Words5, which would again store 5-letter words)? I'm looking at the problem in terms of data retrieval speeds and CPU server load. I could definitely try it both ways and record the times taken for several runs with both methods, but I'd rather hear it from people who might have had experience with this. Which method is generally better overall?

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• What happens to a transaction when App Pool recycles or the worker process is terminated forcefully?

  - by ARS

  The architecture of the application is straight forward. There is a web application which maintain account holder data. This data is processed and the status of account holders is updated based on number of business rules. This process is initiated using a button on the page and is a long running process (say 15 mins). A component is developed to do this data processing which internally calls stored procedures. Most of the business rules are kept in stored procedure. To handle timeouts the processing is done asynchornously(using Thread Pool or custom thread or Async Callback Delegates). The entire process run under a transaction. I would like to know your view on what happens to the transaction if the app pool is recycled or the worker process is terminated forcefully?

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• How to track IIS server performance

  - by Chris Brandsma

  I have a reoccurring issue where a customer calls up and complains that the web site is too slow. Specifically, if they are inactive for a short period of time, then go back to the site, there will be a minute-two minute delay before the user sees a response. (the standard browser is Firefox in this case) I have Perfmon up and running, the cpu utilization is usually below 20% (single proc...don't ask). The database is humming along. And I'm pulling my hair out. So, what metrics/tools do you find useful when evaluating IIS performance?

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• How to build Firefox extention to intercept HTTP requests and responses?

  - by didizingo

  Hi, how do I insert a listener to Firefox http requests and responses, so that I popup a window with the address requested and the response body? Note: I have to do this building an extension to Firefox. I need a button to activate or disable the feature. For every request, I need to popup a window with an "Ok" button to allow the request to be made. Likewise, I need to popup a window with the response body from the web server, with an "Ok" button to allow the content to be displayed by the browser. I know that I have to use nsIHttpChannel, as shown here, but I don't know where to put such code on the extention's architecture. I have very little knowledge about javascript. Could anyone help me?

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• Arguments to convince to switch from CVS to SVN

  - by ereOn

  Hi, The UNIX department of my company currently uses CVS as source-version control system. They use it in a very strange way: different repositories for development/testing/production code (for the same project), no one tags anything, weird directory architecture, and so on. The system has been set for ages but now, I have an opportunity to organize a meeting where I have to suggest changes. I'd like to make them change from CVS to SVN (Mercurial or Git might be even better, however I can't really recommand using a system I don't know well, and switching to SVN will already be a great step forward). I don't have much experience with CVS so I can't compare them efficiently: I just know it doesn't support atomic operations and that it is deprecated. What killer arguments would you use to convince my collegues to do the switch ? Thank you very much.

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• Proper thread termination in multi-threaded C# application

  - by Brian

  I have what I think is a rather complex problem. I have a C# application that utilizes a plug-in architecture using reflection. The application loads plug-in dlls and the user is able to enable/disable them. When a plug-in is enabled, the main app starts a thread to run the plug-in in. In many cases the plug-in may have multiple threads of its own. When I want to disable a plug-in I am calling Thread.Abort(). This seems to kill the initial thread that was created for the plug-in, but any additional threads that the plug-in created continue running. Is there a better way to stop all of the associated plug-in's threads along with the main thread? Thanks.

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• What's your development setup? (Talking right now to my boss)

  - by Flinkman

  How do I tell my boss, that I need endless cpu power to automate my daily job? By the way, what's your setup, now in sep, 2008. How fast disks? How much memory? How many cores? How big screen? (Ok, what the hell are you doing, you may ask. I'm working in multiple environments, vmware. Have couple of build-systems running, for compatibility tests. These build systems are automated. The setup of the build system is also. Is there an another way?) Thanks!

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• Would this union work if char had stricter alignment requirements than int?

  - by paxdiablo

  Recently I came across the following snippet, which is an attempt to ensure all bytes of i (nad no more) are accessible as individual elements of c: union { int i; char c[sizeof(int)]; }; Now this seems a good idea, but I wonder if the standard allows for the case where the alignment requirements for char are more restrictive than that for int. In other words, is it possible to have a four-byte int which is required to be aligned on a four-byte boundary with a one-byte char (it is one byte, by definition, see below) required to be aligned on a sixteen-byte boundary? And would this stuff up the use of the union above? Two things to note. I'm talking specifically about what the standard allows here, not what a sane implementor/architecture would provide. I'm using the term "byte" in the ISO C sense, where it's the width of a char, not necessarily 8 bits.

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• Query about the service or technology behind gmail service

  - by user1726908

  I am a final year computer science student. I am studying in hyderabad, andhra pradesh, india. I have come to know that the gmail is a cloud service. I am very much interested in learning more about cloud computing. This technology has been puzzling,tickling,increasing my curiosity and i just want to learn as much as i can about it. And through experience, i have learnt that practically doing can improve our knowledge and thirst to learn more. Thus, I would like to know "what are the security measures which you have taken to keep the cloud service like gmail secure and authentic? What is the architecture of the service? What are the technologies used in building it? What are the different levels of security applied in general for building a private cloud?"

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• Constructing a function call in C

  - by 0x6adb015

  Given that I have a pointer to a function (provided by dlsym() for example) and a linked list of typed arguments, how can I construct a C function call with those arguments? Example: struct param { enum type { INT32, INT64, STRING, BOOL } type; union { int i32; long long i64; char *str; bool b; } value; struct param *next; }; int call_this(int (*function)(), struct param *args) { int result; /* magic here that calls function(), which has a prototype of f(int, long long, char *, bool); , when args consist of a linked list of INT32, INT64, STRING, BOOL types. */ return result; } The OS is Linux. I would like the solution to be portable across MIPS, PPC and x86 (all 32 bits) architecture, using GCC as the compiler. Thanks!

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• I love programming but i also want to learn hardware. [closed]

  - by user167082

  I like programming so much, i did it since i was 10, and i believe that studying computer science will make a lot of money as well as i love it. However I also want to learn hardware. I don't only want to do programming all the time without knowing the architecture of device that i program. I asked my teacher, and she said that if I get into computer science, i won't learn anything about hardware, is it true?(She graduated from u-dub) In the other hand, my math teacher told me to get into electrical engineering, since it also contain programming. The thing is that i want to emphasize my study to programming while learning some about hardware. What is major that suits me the best? Can i take some hardware courses if I get into computer science major? Thanks a lot.

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• Apache Rewrite Excluding Assets Directory

  - by Midiane

  Hi all I'm writing a mini-MVC application. App architecture: actions/ templates/ site/ app/ styles/ images/ scripts/ So far, I've got a controller working properly, taking in all requests. However, javascript files are not being rendered properly in the browser; I'm getting a 404 Not Found when I try to load the file in the browser. Here is my current Directory config in a vhost file: DirectoryIndex index.php RewriteEngine On RewriteBase /apps/ecatalogue RewriteRule ^scripts/(.*) - [NC,L] <--- Rule not working RewriteCond %{REQUEST_FILENAME} !-f RewriteCond %{REQUEST_FILENAME} !-d RewriteRule ^(.*)$ index.php [NC,L,QSA] I can confirm everything else works; I just need apache to ignore anything in scripts so the file can be loaded normally without being processed by the controller. Your help is appreciated.

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• message queue : selection and sizing

  - by user238591

  Hi, I have 20 messages/s, each 1 - 1.5 Mbytes. I need High Availability (2 to 4 servers min). I need low latencey (high daily volume - full RAM prefered). I need persistent poisoned messages queue. Only few clients (about 16), locally. I can have 12-16G bytes RAM per server (brooker). Which JMS message queue / messaging would you recommend ? On what configuration (CPU/RAM) ? Can I propose optionnal NAS persistence (in case of final delivery failure) ? Thanks

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• How should I structure my iPhone OpenGL ES 1.1 game?

  - by Ryan

  I am building an iPhone OpenGL ES 1.1 game. I am using the OpenGL ES template provided by xcode. I am only using the ES1Renderer. I've coded some basic touch actions the user can take, and I've begun to think about the overall structure of the code. All I'm really doing is using C in the ES1Renderer.m for my entire game state. I have an array of bullet structs, an array on enemy structs, etc.. Besides using this structure, where my entire game state is in ES1Renderer.m as C arrays and structs, what other ways are there to structure the code? Should I be using C++ or Objective-C classes to represent the enemies so they are more modular? The main reason I ask this is because I don't normally code in C, C++ and Objective-C..so I am a little fuzzy on coming up with a good architecture here.

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• R problems using rpart with 4000 records and 13 attributes

  - by josh

  I have attempted to email the author of this package without success, just wondering if anybody else has experienced this. I am having an using rpart on 4000 rows of data with 13 attributes. I can run the same test on 300 rows of the same data with no issue. When I run on 4000 rows, Rgui.exe runs consistently at 50% cpu and the UI hangs.... it will stay like this for at least 4-5hours if I let it run, and never exit or become responsive. here is the code I am using both on the 300 and 4000 size subset : train<-read.csv("input.csv",header=T) y<-train[,18] x<-train[,3:17] library(rpart) fit<-rpart(y~.,x) Is this a known limitation of rpart, am I doing something wrong? potential workarounds? any assistance appreciated

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