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• Document/Scripts management for R code

  - by harshsinghal

  Hi useRs, I am looking for a solution that allows me to keep a track of a multitude of R scripts that I create for various projects and purposes. Some scripts are easily tracked to specific projects, whereas others are "convenience" functions created to serve a set of tasks. Is there a way I can create a central DB and query it to find which scripts match most appropriately? I could create a system using a DBMS manually, but are users aware of anything in general or specific to R, that comes in the form of a software tool (maybe FOSS) ?

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• Capistrano update causes C: to be placed in the current directory (cygwin)

  - by user321775

  When I run cap deploy:update in a directory on my local machine (via cygwin), "C:" magically appears in the directory. Sure enough, I can cd to it and it's my windows C: drive. Now I'm afraid to delete it, but I definitely don't want it in this directory (a rails project under /home/username/blah/blah). Here's my config/deploy.rb file. custom options set :application, "xyz.com" set :repository, "ssh://[email protected]:yyyy/home/git/xxx" set :user, "myname" set :runner, user set :use_sudo, false server "xxx.xxx.xxx.xxx:yyyy", :app, :web, :db, :primary = true deploy to set :deploy_to, "/home/myname/public_html/xyz" repository set :scm, :git set :deploy_via, :copy ssh options default_run_options[:pty] = true ssh_options[:paranoid] = false ssh_options[:port] = yyyy start passenger namespace :deploy do task :start do ; end task :stop do ; end task :restart, :roles = :app, :except = { :no_release = true } do run "#{try_sudo} touch #{File.join(current_path,'tmp','restart.txt')}" end end Anyone see the problem? And does anyone know a safe way of getting rid of the C: drives that have already shown up (this has happened in a few directories)?

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• What's causing "NoMethodError: undefined method `include?' for nil:NilClass"

  - by NudeCanalTroll

  I have a Book model in my Rails application, with various properties (aka columns in the book db table). One of these properties is "ranking". Recently, may app has started to throw NoMethodError: undefined method 'include?' for nil:NilClass for the following code: def some_method(book, another_arg) return book.ranking unless book.ranking.blank? ... end However, it's not consistent. The vast majority of the time, accessing book.ranking works -- the error is thrown maybe 2-4% of the time. If I change the code to book[:ranking] or book['ranking'] instead of book.ranking, it works 100% of the time. Any ideas?

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• Large number of tables and Hibernate memory consumption

  - by Vedran

  I'm working on a large ERP project which has database model with about 2100 tables. With "only" 500 tables mapped with Hibernate, application deployed on the web server takes about 3GB of working memory. Is there any way to reduce Hibernate's metamodel memory footprint when using that many tables in one persistence unit? Or should I just give up on ORMs and go with plain old JDBC (or even jOOQ)? Right now I'm using Hibernate 4.1.8, Spring 3.1.3, JBoss AS 7.1 and working with MSSQL database. Edit: JavaMelody memory histogram output - with 2000 generated test tables that are a bit smaller in scope from the original db model (hence 'only' 1.3GB of spent memory)

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• Problem with NHibernate and saving - NHibernate doesn't detect changes and uses old values.

  - by Vilx-

  When I do this: Cat x = Session.Load<Cat>(123); x.Name = "fritz"; Session.Flush(); NHibernate detects the change and UPDATEs the DB. But, when I do this: Cat x = new Cat(); Session.Save(x); x.Name = "fritz"; Session.Flush(); I get NULL for name, because that's what was there when I called Session.Save(). Why doesn't NHibernate detect the changes - or better yet, take the values for the INSERT statement at the time of Flush()?

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• How to decode this data

  - by Nei dal bem

  I have a field in the DB that is type bytea and this is an example of the data in: \254\355\000\005sr\000\014java.net.URL\226%76\032\374\344r\003\000\007I\000\010hashCodeI\000\004portL\000\011authorityt\000\022Ljava/lang/String;L\000\004fileq\000~\000\001L\000\004hostq\000~\000\001L\000\010protocolq\000~\000\001L\000\003refq\000~\000\001xp\377\377\377\377\377\377\377\377t\000\021asm.objectweb.orgt\000\013/index.htmlq\000~\000\003t\000\004httppx I need to convert this data into readable URL, do you know how can I do that? What type of encoding is this? Thanks!

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• Would you store binary data in database or in file system?

  - by paul

  This is a question which has been asked before (large-text-and-images-in-sql) but mainly for data which will be changed. In my case the data will be stored and never changed. Just seems sensible to keep everything together. Are there any reasons why I should not store static binary data in a database? Assuming it is a sensible thing to do, are there any advantages to storing such data in separate tables? (You might begin to realise now that I'm not a DB expert...) Clarify: There will probably be no more than 10-20 users but these will be in the US and in the UK. The binary data will have to be transfered in any case.

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• Problems deploying Sinatra app to staging environment

  - by chris

  I have a small Sinatra app with both a staging and production environment on a single server with running Nginx. To deploy I am using Capistrano and capistrano-ext to easily deploy to different locations. The problem that the staging environment always runs with the production configuration specified within the app.rb file. configure :staging do # staging settings set :foo, "bar" end configure :production do # prod settings set :foo, "rab" end I have come to the conclusion that the capistrano :environment variable within the deploy.rb file doesn't config Sinatra in any way. I have also tried setting the ENV["RACK_ENV"] to "staging" to no avail. config/deploy/staging.rb server "10.10.100.16", :app, :web, :db, :primary => true set :deploy_to, "/var/www/staging.my_app" set :environment, "staging" set :env, "staging" ENV["RACK_ENV"] = "staging" Any ideas?

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• Read a String as XML in .NET 2.0

  - by Chin

  I have a string that is coming from DB. I would like to read this as XML. String looks like below <settings> <setting name="OfferIDs" value="47,48,49,50,51,52,53,76,77,78,79" /> <setting name="someothersetting" value="" /> <setting name="anothersetting" value="" /> </settings> I would like get the value of OfferIDs as a string using VB.NET. Many Thanks in advance.

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• Database for Large number of 1kB data chunks (MySQL?)

  - by The Unknown

  I have a very large dataset, each item in the dataset being roughly 1kB in size. The data needs to be queried rapidly by many applications distributed over a network. The dataset has more than a million items (so 500 million+ 1kB data chunks). What would be the best method to storing this dataset (need to allow adding more items, and reading them rapidly, but never modifying already added data)? Would using a MySQL DB using the binary blob format be appropriate? Or should each of these be stored as files on a file system? edit: the number is 1 million items now, but needs to be able to scale to well over 500 million items easily.

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• Hibernate mapping to manage bidirectional relationship using intermediate table

  - by shikarishambu

  I have an object hierarchy that is as follows. Party inherited by Organization and Person Organization inherited by Customer, Vendor Person inherited by Contact In the database I have the following tables Party, Customer, Vendor, Contact. All of them have a corresponding row in Party table. Contact belongs to either Vendor or Customer. I have a field on the Contact table for org_party_id. However, since the organization can be either a Customer or Vendor I need to be able to look at different tables. Is there a way to map this in hibernate? Or, a better way to manage it in DB/ hibernate?

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• Push a variable into global scope?

  - by Spot

  We use instantiate and put system critical objects in $GLOBALS for easy access from anywhere (e.g. DB, Cache, User, etc.). We use $GLOBALS so much that it would (yes, really) drop the amount of code quite a bit if I could reference it like $G = &$GLOBALS for a shorthand call. The problem is that, per my experience and several hours of Googling, I have not found any construct in PHP which allows you to 'flag' a var as global, making $GLOBALS first class, and everything else second class. Am I missing something? Is this possible?

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• PDO Prepare statement not processing parameters

  - by Danten

  I've exhausted all efforts at what appears to be a trivial problem, but gotten nowhere. There is a simple Prepare statement: $qry = $core->db->prepare("SELECT * FROM users WHERE email = '?'"); $qry->execute(array('[email protected]')); However, no rows are returned. Running the query with the parameters hardcoded into the query results in a successful selection of one row. I've tryed many different methods of doing the prepare, but even it this most simple form it isn't working. The PDO object is stored in a singleton called Core. PDO is using the mysql driver.

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• .net exception pool

  - by javier

  I want to create a mecanism in a large .net application to handle all the exceptions in the application, and to save the error messages (in db or log file) so these errors can be fixed, and so we are aware of the problems in the application. Does anyone know a good way of creating a library to handle and process all the exceptions?. Are there any tools around that can simplify my task. What aproach would you suggest me to take.... If you previously implemented something similar to what I want to do, I do want to heard from you Thanks all

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• Perl launched from Java takes forever

  - by Wade Williams

  I know this is an absolute shot in the dark, but we're absolutely perplexed. A perl (5.8.6) script run by Java (1.5) is taking more than an hour to complete. The same script, when run manually from the command line takes 12 minutes to complete. This is on a Linux host. Logging is the same in both cases and the script is run with the same parameters in both cases. The script does some complex stuff like Oracle DB access, some scp's, etc, but again, it does the exact same actions in both cases. We're stumped. Has anyone ever run into a similar situation? If not and if you were faced with the same situation, how would you consider debugging it?

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• MySQL - Where - search string - MATCH.

  - by Jamie

  Hi guys, Quick question. I'm in a bit of a rush but if someone could quickly point me in the right direction I would be very very happy. I have a field in the db, let's call it field_a which returns a string in the format "20,50,60,80" etc. I wish to do a query which will search in this field to see if 20 exists. Could I use MySQL MATCH or is there a better way? Thank you!

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• Are there any medium-sized web applications built with CGI::Application that are open-sourced?

  - by mithaldu

  I learn best by taking apart something that already does something and figuring out why decisions were made in which manner. Recently I've started working with Perl's CGI::Application framework, but found i don't really get along well with the documentation (too little information on how to best structure an application with it). There are some examples of small applications on the cgi-app website, but they're mostly structured such that they demonstrate a small feature, but contain mostly of code that one would never actually use in production. Other examples are massively huge and would require way too much time to dig through. And most of them are just stuff that runs on cgiapp, but isn't open source. As such I am looking for something that has most base functionality like user logins, db access, some processing, etc.; is actually used for something but not so big that it would take hours to even set them up. Does something like that exist or am i out of luck?

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• Anonymous iterator blocks in Clojure?

  - by Checkers

  I am using clojure.contrib.sql to fetch some records from an SQLite database. (defn read-all-foo [] (with-connection *db* (with-query-results res ["select * from foo"] (into [] res)))) Now, I don't really want to realize the whole sequence before returning from the function (i.e. I want to keep it lazy), but if I return res directly or wrap it some kind of lazy wrapper (for example I want to make a certain map transformation on result sequence), SQL-related bindings will be reset and connection will be closed after I return, so realizing the sequence will throw an exception. How can I enclose the whole function in a closure and return a kind of anonymous iterator block (like yield in C# or Python)? Or is there another way to return a lazy sequence from this function?

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• Options for storing large text blobs in/with an SQL database?

  - by kdt

  Hi, I have some large volumes of text (log files) which may be very large (up to gigabytes). They are associated with entities which I'm storing in a database, and I'm trying to figure out whether I should store them within the SQL database, or in external files. It seems like in-database storage may be limited to 4GB for LONGTEXT fields in MySQL, and presumably other DBs have similar limits. Also, storing in the database presumably precludes any kind of seeking when viewing this data -- I'd have to load the full length of the data to render any part of it, right? So it seems like I'm leaning towards storing this data out-of-DB: are my misgivings about storing large blobs in the database valid, and if I'm going to store them out of the database then are there any frameworks/libraries to help with that? (I'm working in python but am interested in technologies in other languages too)

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• Porting VS2005 project to VS2008

  - by lucavb

  i need to port a VS2005 Project (.NET2) to a VS2008 (.NET3.5) (or to VS2010 .NET4 not yet defined). The project is composed by: resources and configuration files (VS project files, like: .settings .vbproj .myapp .config .xconfig .Designer.vb); a lot of VB codes; xsc, xsd, xss and xsx files; a lot of Crystal reports for VS2005; graphical resources. The application take data in order to generate reports from more DB SQL Server 2005 istances. What is the best way to approach to a migration activity? Is there an internal migration tool? If yes, what's the best practice to use it? Which kind of files will be automatically ported to the new VS version? Thanks in advance for all the provided information

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• T-SQL stored procedure to return google style "suggested" search results

  - by stephen776

  Ok, using SQL Server 2008. On my web page I have a textbox with jQuery-UI AutoComplete hooked up. Now I need a stored procedure to search across all columns of a single table(or multiple joined tables I suppose) for a search string coming from the textbox/autocomplete AJAX call, and return "suggested" search strings. I am using the AdventureWorks db for testing(Products table) So for example, the product table has columns for product name and product number(among others) and I want to return suggested search strings based on user input where they may enter a product name and/or a product number. I have it working across a single column which was simple. Any ideas?

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• Joomla! 2.5 use login data from another database

  - by user1756746

  I have a hard question. I'd like the joomla login does not use its own database for users/password but I want to use my database users with my table fields, my passwords etc.. I don't know from where start, I thought I could edit database request for login to my db or create a little script to automatically add the users on joomla database. I tried to see components/com_users/views/login/tmpl/default_login.php but it seems that there is nothing. Can someone help me figure out what to change? Maybe the simple thing is import my database users into database user joomla, is there any plugin or something else that you know? p.s. I use Clarion theme build on Gantry framework, Joomla! 2.5.6 Stable, PHP 5.2.17

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• JSF Pages call ManagedBeans that are not defined on the page and call all getters sometimes more tha

  - by Bill Leeper

  I have several JSF pages that are initializing and accessing ManagedBeans that are not even used on that page. This is creating a really hairy problem for initialization. I either have to make them all session scope and continually make calls to re-inialize or take the performance hit of having them read large amounts of data from the DB whenever they decide to initialize. Some of the managed beans being accessed are not even defined on the page in question. I have done some optimization based on comments related to multiple calls to getters, but I still have the issue that I have a very specialized (and expensive to initialize) bean that is getting called when I don't want it initialized. Any insight into why/what JSF calls might do something like this. I have a very complex page making use of JSTL, Tomahawk and standard JSF tags. I could include code, but its very complex and sensitive in nature.

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• Copy a Table's data from a Stored Procedure

  - by Niike2

  I am learning how to use SQL and Stored Procedures. I know the syntax is incorrect: Copy data from one table into another table on another Database with a Stored Procedure. The problem is I don't know what table or what database to copy to. I want it to use parameters and not specify the columns specifically. I have 2 Databases (Master_db and Master_copy) and the same table structure on each DB. I want to quickly select a table in Master_db and copy that table's data into Master_copy table with same name. I have come up with something like this: USE Master_DB CREATE PROCEDURE TransferData DEFINE @tableFrom, @tableTo, @databaseTo; INSERT INTO @databaseTo.dbo.@databaseTo SELECT * FROM Master_DB.dbo.@tableFrom GO;

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• Rails rabl json format

  - by brabertaser1992

  I'm displaying data from my db in json format using rabl to parse it for android... My json looks like so: [ { "bank":{ "central_office_address":"ololo", "license":"12312312", "location_id":3, "name":"Pbank", "tax_number":"12312312", "year_of_foundation":1987 } }, { "bank":{ "central_office_address":"sdfsdf sdf", "license":"321312", "location_id":3, "name":"Bbank", "tax_number":"321321", "year_of_foundation":1999 } } ] I need my json in a format like: { "contacts": [ { "id": "c200", "name": "Ravi Tamada", "email": "[email protected]", "address": "xx-xx-xxxx,x - street, x - country", "gender" : "male", "phone": { "mobile": "+91 0000000000", "home": "00 000000", "office": "00 000000" } }, { "id": "c201", "name": "Johnny Depp", "email": "[email protected]", "address": "xx-xx-xxxx,x - street, x - country", "gender" : "male", "phone": { "mobile": "+91 0000000000", "home": "00 000000", "office": "00 000000" } } ] } Such data is normally parsed in java.... My rabl view: object @banks attributes :central_office_address, :license, :location_id, :name, :tax_number, :year_of_foundation How do I change its output to match the second example?

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