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  • Unable to plot graph using matplotlib

    - by Aman Deep Gautam
    I have the following code which searches all the directory in the current directory and then takes data from those files to plot the graph. The data is read correctly as verified by printing but there are no points plotted on graph. import argparse import os import matplotlib.pyplot as plt #find the present working directory pwd=os.path.dirname(os.path.abspath(__file__)) #find all the folders in the present working directory. dirs = [f for f in os.listdir('.') if os.path.isdir(f)] plt.figure() plt.xlim(0, 20000) plt.ylim(0, 1) for directory in dirs: os.chdir(os.path.join(pwd, directory)); chd_dir = os.path.dirname(os.path.abspath(__file__)) files = [ fl for fl in os.listdir('.') if os.path.isfile(fl) ] print files for f in files: f_obj = open(os.path.join(chd_dir, f), 'r') list_x = [] list_y = [] for i in xrange(0,4): f_obj.next() for line in f_obj: temp_list = line.split() print temp_list list_y.append(temp_list[0]) list_x.append(temp_list[1]) print 'final_lsit' print list_x print list_y plt.plot(list_x, list_y, 'r.') f_obj.close() os.chdir(pwd) plt.savefig("test.jpg") The input files look like the following: 5 865 14709 15573 14709 1.32667e-06 664 0.815601 14719 1.55333e-06 674 0.813277 14729 1.82667e-06 684 0.810185 14739 1.4e-06 694 0.808459 Can anybody help me with why this is happening? Being new I would like to know some tutorial where I can get help with kind of plotting as the tutorial I was following made me end up here. Any help appreciated.

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  • Extract points within a shape from a raster

    - by user308827
    Hi, I have a raster file (basically 2D array) with close to a million points. I am trying to extract a circle from the raster (and all the points that lie within the circle. Using ArcGIS is exceedingly slow for this. Can anyone suggest any image processing library that is both easy to learn and powerful and quick enough for something like this? Thanks!

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  • Check if something is a list

    - by 8EM
    What is the easiest way to check if something is a list? A method doSomething has the parameters a and b. In the method, it will loop through the list a and do something. I'd like a way to make sure a is a list, before looping through - thus avoiding an error or the unfortunate circumstance of passing in a string then getting back each letter. This question must have been asked before - however my googles failed me. Cheers.

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  • ProgrammingError: (1146, "Table 'test_<DB>.<TABLE>' doesn't exist") when running unit test for Djang

    - by abigblackman
    I'm running a unit test using the Django framework and get this error. Running the actual code does not have this problem, running the unit tests creates a test database on the fly so I suspect the issue lies there. The code that throws the error looks like this member = Member.objects.get(email=email_address) and the model looks like class Member(models.Model): member_id = models.IntegerField(primary_key=True) created_on = models.DateTimeField(editable=False, default=datetime.datetime.utcnow()) flags = models.IntegerField(default=0) email = models.CharField(max_length=150, blank=True) phone = models.CharField(max_length=150, blank=True) country_iso = models.CharField(max_length=6, blank=True) location_id = models.IntegerField(null=True, blank=True) facebook_uid = models.IntegerField(null=True, blank=True) utc_offset = models.IntegerField(null=True, blank=True) tokens = models.CharField(max_length=3000, blank=True) class Meta: db_table = u'member' there's nothing too odd there i can see. the user running the tests has the same permissions to the database server as the user that runs the website where else can I look to see what's going wrong, why is this table not being created?

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  • Conditional row coloring in a PocketPyGUI table (PythonCE)

    - by PabloG
    I'm working on a an PythonCE application, using the PocketPyGUI toolkit. I'm using the gui.Table control to display a large list of choices (addresses, codes and data associated), and I want to assign a different color to the rows that have been completed. Is there any way to colorize the rows given certain conditions? TIA, Pablo

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  • how do i insert spaces into a string using the range function?

    - by user1319219
    If I have a string, for example which reads: 'Hello how are you today Joe' How am I able to insert spaces into it at regular intervals? So for example I want to insert spaces into it using the range function in these steps: range(0,27,2). So it will look like this: 'He lo ho w ar e yo u to da y Jo e' It now has a space at every 2nd index going up to it's end. How do I do this does anyone know? thanks.

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  • Detect if 2 HTML fragments have identical hierarchical structure

    - by sergzach
    An example of fragments that have identical hierarchical structure: (1) <div> <span>It's a message</span> </div> (2) <div> <span class='bold'>This is a new text</span> </div> An example of fragments that have different structure: (1) <div> <span><b>It's a message</b></span> </div> (2) <div> <span>This is a new text</span> </div> So, fragments with a similar structure correspond to one hierarchical tree (the same tag names, the same hierarchical structure). How can I detect if 2 elements (html fragments) have the same structure simply with lxml? I have a function that does not work properly for some more difficult case (than the example): def _is_equal( el1, el2 ): # input: 2 elements with possible equal structure and tag names # e.g. root = lxml.html.fromstring( buf ) # el1 = root[ 0 ] # el2 = root[ 1 ] # move from top to bottom, compare elements result = False if el1.tag == el2.tag: # has no children if len( el1 ) == len( el2 ): if len( el1 ) == 0: return True else: # iterate one of them, for example el1 i = 0 for child1 in el1: child2 = el2[ i ] is_equal2 = _is_equal( child1, child2 ) if not is_equal2: return False return True else: return False else: return False The code fails to detect that 2 divs with class='tovar2' have an identical structure: <body> <div class="tovar2"> <h2 class="new"> <a href="http://modnyedeti-krsk.ru/magazin/product/333193003"> ?????? ?/? </a> </h2> <ul class="art"> <li> ???????: <span>1759</span> </li> </ul> <div> <div class="wrap" style="width:180px;"> <div class="new"> <img src="shop_files/new-t.png" alt=""> </div> <a class="highslide" href="http://modnyedeti-krsk.ru/d/459730/d/820.jpg" onclick="return hs.expand(this)"> <img src="shop_files/fr_5.gif" style="background:url(/d/459730/d/548470803_5.jpg) 50% 50% no-repeat scroll;" alt="?????? ?/?" height="160" width="180"> </a> </div> </div> <form action="" onsubmit="return addProductForm(17094601,333193003,3150.00,this,false);"> <ul class="bott "> <li class="price">????:<br> <span> <b> 3 150 </b> ???. </span> </li> <li class="amount">???-??:<br><input class="number" onclick="this.select()" value="1" name="product_amount" type="text"> </li> <li class="buy"><input value="" type="submit"> </li> </ul> </form> </div> <div class="tovar2"> <h2 class="new"> <a href="http://modnyedeti-krsk.ru/magazin/product/333124803">?????? ?/?</a> </h2> <ul class="art"> <li> ???????: <span>1759</span> </li> </ul> <div> <div class="wrap" style="width:180px;"> <div class="new"> <img src="shop_files/new-t.png" alt=""> </div> <a class="highslide" href="http://modnyedeti-krsk.ru/d/459730/d/820.jpg" onclick="return hs.expand(this)"> <img src="shop_files/fr_5.gif" style="background:url(/d/459730/d/548470803_5.jpg) 50% 50% no-repeat scroll;" alt="?????? ?/?" height="160" width="180"> </a> </div> </div> <form action="" onsubmit="return addProductForm(17094601,333124803,3150.00,this,false);"> <ul class="bott "> <li class="price">????:<br> <span> <b>3 150</b> ???. </span> </li> <li class="amount">???-??:<br><input class="number" onclick="this.select()" value="1" name="product_amount" type="text"> </li> <li class="buy"> <input value="" type="submit"> </li> </ul> </form> </div> </body>

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  • Segment string into array, regex?

    - by Hanpan
    I have a string which looks like this: "[segment1][segment2][segment2]" What I'd like is to be able to split the string into an array, so I'd end up with: Array[0] = "segment1", Array[1] = "segment2", Array[2] = "segment3" I've tried using the string split function, but it doesn't seem to do exactly what I want. I was wondering if anyone has some regex which might help me out? Thanks in advance

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  • Django dictionary in templates: Grab key from another objects attribute

    - by Jordan Messina
    I have a dictionary called number_devices I'm passing to a template, the dictionary keys are the ids of a list of objects I'm also passing to the template (called implementations). I'm iterating over the list of objects and then trying to use the object.id to get a value out of the dict like so: {% for implementation in implementations %} {{ number_devices.implementation.id }} {% endfor %} Unfortunately number_devices.implementation is evaluated first, then the result.id is evaluated obviously returning and displaying nothing. I can't use parentheses like: {{ number_devices.(implementation.id) }} because I get a parse error. How do I get around this annoyance in Django templates? Thanks for any help!

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  • Function for averages of tuples in a dictionary

    - by Billy Mann
    I have a string, dictionary in the form: ('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) Each parentheses is a tuple which corresponds to (score, standard deviation). I'm taking the average of just the first integer in each tuple. I've tried this: def score(string, d): for word in d: (score, std) = d[word] d[word]=float(score),float(std) if word in string: word = string.lower() number = len(string) return sum([v[0] for v in d.values()]) / float(len(d)) if len(string) == 0: return 0 When I run: print score('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) I should get 5.5 but instead I'm getting 5.875. Can't figure out what in my function is not allowing me to get the correct answer.

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  • Regular Expression Question

    - by zyq524
    I'm trying to use regular expression to extract the comments in the heading of a file. For example, the source code may look like: //This is an example file. //Please help me. #include "test.h" int main() //main function { ... } What I want to extract from the code are the first two lines, i.e. //This is an example file. //Please help me. Any idea?

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  • Update Facebook Page's status using pyfacebook

    - by thornomad
    I am attempting to add functionality to my Django app: when a new post is approved, I want to update the corresponding Facebook Page's status with a message and a link to the post automatically. Basic status update. I have downloaded and installed pyfacebook - and I have read through the tutorial from Facebook. I have also seen this suggestion here on SO: import facebook fb = facebook.Facebook('YOUR_API_KEY', 'YOUR_SECRET_KEY') fb.auth.createToken() fb.login() # THIS IS AS FAR AS I CAN GET fb.auth.getSession() fb.set_status('Checking out StackOverFlow.com') When I get to the login() call, however, pyfacebook tries to open lynx so I can login to Facebook 'via the web' -- this is, obviously, not going to work for me because the system is supposed to be automated ... I've been looking, but can't find out how I can keep this all working with the script and not having to login via a web browser. Any ideas?

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  • Simplifying for-if messes with better structure?

    - by HH
    # Description: you are given a bitwise pattern and a string # you need to find the number of times the pattern matches in the string # any one liner or simple pythonic solution? import random def matchIt(yourString, yourPattern): """find the number of times yourPattern occurs in yourString""" count = 0 matchTimes = 0 # How can you simplify the for-if structures? for coin in yourString: #return to base if count == len(pattern): matchTimes = matchTimes + 1 count = 0 #special case to return to 2, there could be more this type of conditions #so this type of if-conditionals are screaming for a havoc if count == 2 and pattern[count] == 1: count = count - 1 #the work horse #it could be simpler by breaking the intial string of lenght 'l' #to blocks of pattern-length, the number of them is 'l - len(pattern)-1' if coin == pattern[count]: count=count+1 average = len(yourString)/matchTimes return [average, matchTimes] # Generates the list myString =[] for x in range(10000): myString= myString + [int(random.random()*2)] pattern = [1,0,0] result = matchIt(myString, pattern) print("The sample had "+str(result[1])+" matches and its size was "+str(len(myString))+".\n" + "So it took "+str(result[0])+" steps in average.\n" + "RESULT: "+str([a for a in "FAILURE" if result[0] != 8])) # Sample Output # # The sample had 1656 matches and its size was 10000. # So it took 6 steps in average. # RESULT: ['F', 'A', 'I', 'L', 'U', 'R', 'E']

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  • ahow can I resolve Django Error: str' object has no attribute 'autoescape'?

    - by Angelbit
    Hi have tried to create a inclusion tag on Django but don't work and return str' object has no attribute 'autoescape' this is the code of custom tag: from django import template from quotes.models import Quotes register = template.Library() def show_quote(): quote = Quotes.objects.values('quote', 'author').get(id=0) return {'quote': quote['quote']} register.inclusion_tag('quotes.html')(show_quote) EDIT: Quote class from django.db import models class Quotes(models.Model): quote = models.CharField(max_length=255) author = models.CharField(max_length=100) class Meta: db_table = 'quotes' quotes.html <blockquote id="quotes">{{ quote }}</blockquote>

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • Why doesn't this list comprehension do what I expect it to do?

    - by Az
    The original list project_keys = sorted(projects.keys()) is [101, 102, 103, 104, 105, 106, 107, 108, 109, 110] where the following projects were deemed invalid this year: 108, 109, 110. Thus: for project in projects.itervalues(): # The projects dictionary is mapped to the Project class if project.invalid: # Where invalid is a Bool parameter in the Project class project_keys.remove(project.proj_id) print project_keys This will return a list of integers (which are project id's) as such: [101, 102, 103, 104, 105, 106, 107] Sweet. Now, I wanted it try the same thing using a list comprehension. project_keys = [project_keys.remove(project.proj_id) for project in projects.itervalues() if project.invalid print project_keys This returns: [None, None, None] So I'm populating a list with the same number as the removed elements but they're Nones? Can someone point out what I'm doing wrong? Additionally, why would I use a list comprehension over the for-if block at the top? Conciseness? Looks nicer?

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  • How can I merge two lists and sort them working in 'linear' time?

    - by Sergio Tapia
    I have this, and it works: # E. Given two lists sorted in increasing order, create and return a merged # list of all the elements in sorted order. You may modify the passed in lists. # Ideally, the solution should work in "linear" time, making a single # pass of both lists. def linear_merge(list1, list2): finalList = [] for item in list1: finalList.append(item) for item in list2: finalList.append(item) finalList.sort() return finalList # +++your code here+++ return But, I'd really like to learn this stuff well. :) What does 'linear' time mean?

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  • Optimizing list comprehension to find pairs of co-prime numbers

    - by user3685422
    Given A,B print the number of pairs (a,b) such that GCD(a,b)=1 and 1<=a<=A and 1<=b<=B. Here is my answer: return len([(x,y) for x in range(1,A+1) for y in range(1,B+1) if gcd(x,y) == 1]) My answer works fine for small ranges but takes enough time if the range is increased. such as 1 <= A <= 10^5 1 <= B <= 10^5 is there a better way to write this or can this be optimized?

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  • Get wrong PATH_INFO after rewriting in lighttpd

    - by Satoru.Logic
    In my lighttpd config file, I have a rewrite rule like this: $HTTP["host"] == "sub.example.com" { url.rewrite = ( "^/(.*)" => "/sub/$1" ) } So when a user visits http://sub.example.com, she's actually visiting http://example.com/sub. The problem is that the PATH_INFO seems wrong, URL: http://sub.example.com/extra PATH_INFO: expected: /extra what I get: /sub/extra Now whenever I call request.get_path(), it returns something like http://sub.example.com/sub/extra, which is not what I want. Of course, I can just override the get_path method of the request class, but I wonder if there is a simpler way like changing the lighttpd config?

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  • Mixing Matplotlib patches with polar plot?

    - by Roger
    I'm trying to plot some data in polar coordinates, but I don't want the standard ticks, labels, axes, etc. that you get with the Matplotlib polar() function. All I want is the raw plot and nothing else, as I'm handling everything with manually drawn patches and lines. Here are the options I've considered: 1) Drawing the data with polar(), hiding the superfluous stuff (with ax.axes.get_xaxis().set_visible(False), etc.) and then drawing my own axes (with Line2D, Circle, etc.). The problem is when I call polar() and subsequently add a Circle patch, it's drawn in polar coordinates and ends up looking like an infinity symbol. Also zooming doesn't seem to work with the polar() function. 2) Skip the polar() function and somehow make my own polar plot manually using Line2D. The problem is I don't know how to make Line2D draw in polar coordinates and haven't figured out how to use a transform to do that. Any idea how I should proceed?

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