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  • Matching Strings: a biological perspective

    - by sun
    Write a function, called constrainedMatchPair which takes three arguments: a tuple representing starting points for the first substring, a tuple representing starting points for the second substring, and the length of the first substring. The function should return a tuple of all members (call it n) of the first tuple for which there is an element in the second tuple (call it k) such that n+m+1 = k, where m is the length of the first substring. Complete the definition def constrainedMatchPair(firstMatch,secondMatch,length):

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  • Filtering SQLAlchemy query on attribute_mapped_collection field of relationship

    - by bsa
    I have two classes, Tag and Hardware, defined with a simple parent-child relationship (see the full definition at the end). Now I want to filter a query on Tag using the version field in Hardware through an attribute_mapped_collection, eg: def get_tags(order_code=None, hardware_filters=None): session = Session() query = session.query(Tag) if order_code: query = query.filter(Tag.order_code == order_code) if hardware_filters: for k, v in hardware_filters.iteritems(): query = query.filter(getattr(Tag.hardware, k).version == v) return query.all() But I get: AttributeError: Neither 'InstrumentedAttribute' object nor 'Comparator' object associated with Tag.hardware has an attribute 'baseband The same thing happens if I strip it back by hard-coding the attribute, eg: query.filter(Tag.hardware.baseband.version == v) I can do it this way: query = query.filter(Tag.hardware.any(artefact=k, version=v)) But why can't I filter directly through the attribute? Class definitions class Tag(Base): __tablename__ = 'tag' tag_id = Column(Integer, primary_key=True) order_code = Column(String, nullable=False) version = Column(String, nullable=False) status = Column(String, nullable=False) comments = Column(String) hardware = relationship( "Hardware", backref="tag", collection_class=attribute_mapped_collection('artefact'), ) __table_args__ = ( UniqueConstraint('order_code', 'version'), ) class Hardware(Base): __tablename__ = 'hardware' hardware_id = Column(Integer, primary_key=True) tag_id = Column(String, ForeignKey('tag.tag_id')) product_id = Column(String, nullable=True) artefact = Column(String, nullable=False) version = Column(String, nullable=False)

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  • writing 'bits' to c++ file streams

    - by Sorush Rabiee
    How can i write 'one bit' into a file stream or file structure each time? is it possible to write to a queue and then flush it ? is it possible with c# or java? this was needed when i try to implement an instance of Huffman codding. i can't write bits into files. so write them to a bitset and then (when compression was completed) write 8-bit piece of it each time (exclude last one).

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  • diffstrings.py : how do you specify path arguments?

    - by rudifa
    I am trying to use diffstrings.py from Three20 on my iPhone project, and I can't find the proper format for the path arguments (as in "Usage: diffstrings.py [options] path1 path2 ..."). For example, when I run the script in my Xcode project directory like this ~/py/diffstrings.py -b it analyzes just the main.m and finds 0 strings to localize, then it diffs against existing fr.lproj and others, and finds that thes contain "obsolete strings". Can anyone post examples of successful comand line invocations of diffstrings.py, for options -b, -d and -m?

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  • Why does cloning the django inline formsets result to forms with similar ids and names?

    - by user1289167
    In my project I use django inline formsets. I got the jquery to clone the formsets but unfortunately the cloned forms have the same names and ids and so data entered in the last one overwrites the data from the first form. What could I be doing wrong? Here is the script: <script type="text/javascript">> function cloneMore(selector, type) { var newElement = $(selector).clone(true); var total = $('#id_' + type + '-TOTAL_FORMS').val(); newElement.find(':input').each(function() { var name = $(this).attr('name').replace('-' + (total-1) + '-','-' + total + '-'); var id = 'id_' + name; $(this).attr({'name': name, 'id': id}).val('').removeAttr('checked'); }); newElement.find('label').each(function() { var newFor = $(this).attr('for').replace('-' + (total-1) + '-','-' + total + '-'); $(this).attr('for', newFor); }); total++; $('#id_' + type + '-TOTAL_FORMS').val(total); $(selector).after(newElement); } </script>

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  • Choosing randomly all the elements in the the list just once

    - by Dalek
    How is it possible to randomly choose a number from a list with n elements, n time without picking the same element of the list twice. I wrote a code to choose the sequence number of the elements in the list but it is slow: >>>redshift=np.array([0.92,0.17,0.51,1.33,....,0.41,0.82]) >>>redshift.shape (1225,) exclude=[] k=0 ng=1225 while (k < ng): flag1=0 sq=random.randint(0, ng) while (flag1<1): if sq in exclude: flag1=1 sq=random.randint(0, ng) else: print sq exclude.append(sq) flag1=0 z=redshift[sq] k+=1 It doesn't choose all the sequence number of elements in the list.

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  • twisted DeferredList parallel Image Download

    - by bell007
    This is code: http://www.dpaste.de/Ij0S/ 1,if there is a erorr (networking erorr,or Unhandled error in Deferred), the code stop. I need this code running until all urls finish request. (May be the parallel function not work? ) 2,when I write image to local filesystem, if meet erorr, there images may not complete. Thanks!

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  • How to map one class against multiple tables with SQLAlchemy?

    - by tote
    Lets say that I have a database structure with three tables that look like this: items - item_id - item_handle attributes - attribute_id - attribute_name item_attributes - item_attribute_id - item_id - attribute_id - attribute_value I would like to be able to do this in SQLAlchemy: item = Item('item1') item.foo = 'bar' session.add(item) session.commit() item1 = session.query(Item).filter_by(handle='item1').one() print item1.foo # => 'bar' I'm new to SQLAlchemy and I found this in the documentation (http://www.sqlalchemy.org/docs/05/mappers.html#mapping-a-class-against-multiple-tables): j = join(items, item_attributes, items.c.item_id == item_attributes.c.item_id). \ join(attributes, item_attributes.c.attribute_id == attributes.c.attribute_id) mapper(Item, j, properties={ 'item_id': [items.c.item_id, item_attributes.c.item_id], 'attribute_id': [item_attributes.c.attribute_id, attributes.c.attribute_id], }) It only adds item_id and attribute_id to Item and its not possible to add attributes to Item object. Is what I'm trying to achieve possible with SQLAlchemy? Is there a better way to structure the database to get the same behaviour of "dynamic columns"?

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  • regex numeric data processing: match a series of numbers greater than X

    - by Mu Mind
    Say I have some data like this: number_stream = [0,0,0,7,8,0,0,2,5,6,10,11,10,13,5,0,1,0,...] I want to process it looking for "bumps" that meet a certain pattern. Imagine I have my own customized regex language for working on numbers, where [[ =5 ]] represents any number = 5. I want to capture this case: ([[ >=5 ]]{3,})[[ <3 ]]{2,} In other words, I want to begin capturing any time I look ahead and see 3 or more values = 5 in a row, and stop capturing any time I look ahead and see 2+ values < 3. So my output should be: >>> stream_processor.process(number_stream) [[5,6,10,11,10,13,5],...] Note that the first 7,8,... is ignored because it's not long enough, and that the capture ends before the 0,1,0.... I'd also like a stream_processor object I can incrementally pass more data into in subsequent process calls, and return captured chunks as they're completed. I've written some code to do it, but it was hideous and state-machiney, and I can't help feeling like I'm missing something obvious. Any ideas to do this cleanly?

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  • Extracting specific words that end with .c and .h [on hold]

    - by Alberto Mederos
    I have a very big list of file names that end with a the following: .c .h .cpp and much more. I need to extract file names that end with .c and .h How do I do that? Also, how could I add quotation marks to the beginning and end of the word, followed with a comma? For example, if I have this in the list: mi_var.c How could I extract it from a very big list, and everything else that ends in .c and replace it to have quotation marks and a comma at the end? Like this: "mi_var.c", I'm new to this, any help is greatly appreciated. Here is part of the list: gsd5t_image.c, gsd5t_image_sqif.c, proc_arm.c, proc_cortex.c, proc_k32.c, proc_k32_entry.s, proc_k32_test.c, proc_k32_test_start.s, rom_sub_functions.s, rom_sub_functions_gcc.s, sqif_jump_table.s, sqif_jump_table_gcc.s, tracker_wrapper_functions.s, vector_M0.c, ptimer.c, ptimer_arm.c, ptimer_internal.h, ptimer_internal_arm.h, ptimer_internal_k32.h, ptimer_k32.c, RstMod_if.h, drvRstMod.h, tbus.dxy, tbus_common.c, tbus_common.h, act.c, act.h, act.msgs, act_if.c, act_if.h, sat_signal_processor.c, sat_signal_processor.h, ssp.dxy, ssp.msgs, ssp_acq_handlers.c, ssp_acq_handlers.h, ssp_atx_if.c, ssp_atx_if.h, ssp_bitsync_handlers.c, ssp_bitsync_handlers.h, ssp_cohver_handlers.c, ssp_cohver_handlers.h, ssp_cwscan_handlers.c, ssp_cwscan_handlers.h, ssp_track_handlers.c, ssp_track_handlers.h, ssp_atx_if_test_sort.c, ssp_hack.c, ssp_hack.h, ssp_suite.cpp, ssp_suite.h, ssptloop.c, ssptloop.h, sss.dxy, sss.msgs, sss_atx_if.c, sss_atx_if.h, strong_signal_scan.c, So how to extract certain names?

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  • What is an alternative to eval in this situation?

    - by CppLearner
    Many of my view functions do similar things. For the most part, they reverse to a different views upon clicking a button / a text link. So I wrote a helper function render_reverse def render_reverse(f, args): # args are all string type return eval('reverse(' + f + ', ' + args + ')' ) eval is a bad practice, and is pretty slow. It takes 3 seconds to start redirecting, whereas calling reverse directly takes less than 1 second to start redirecting. What alternative do I have? By the way, the function above doesn't work properly. I was modelling after this line (which works) eval('reverse("homepage", args=["abcdefg"])') Thanks.

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  • gtk+ checkbutton settings

    - by jldupont
    Is there a way to use set_active on a gtkCheckButton but without the user being able to press/toggle the said button? In other words, I want to programmatically control the active state of the CheckButton but I don't want the user to be able to change it.

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  • Permission to view, but not to change! - Django

    - by RadiantHex
    Hi folks, is it possible to give users the permission to view, but not to change or delete. currently in the only permissions I see are "add", "change" and "delete"... but there is no "read/view" in there. I really need this as some users will only be able to consult the admin panel, in order to see what has been added in. Help would be amazing!

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  • Is this the right way of handling command line arguments?

    - by shadyabhi
    ask_username = True ask_password = True ask_message = True ask_number = True def Usage(): print '\t-h, --help: View help' print '\t-u, --username: Username' print '\t-p, --password: Password' print '\t-n, --number: numbber to send the sms' print '\t-m, --message: Message to send' sys.exit(1) opts, args = getopt(sys.argv[1:], 'u:p:m:n:h',["username=","password=","message=","number=","help"]) print opts, args for o,v in opts: if o in ("-h", "--help"): Usage() elif o in ("-u", "--username"): username = v ask_username = False elif o in ("-p", "--password"): passwd = v ask_password = False elif o in ("-m", "--message"): message = v ask_message = False elif o in ("-n", "--number"): number = v ask_number = False #Credentials taken here if ask_username: username = raw_input("Enter USERNAME: ") if ask_password: passwd = getpass() if ask_message: message = raw_input("Enter Message: ") if ask_number: number = raw_input("Enter Mobile number: ") I dont think it is, because I am using 4 objects just for checking if command line argument was provided... Guide me with the best way of doing it..

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  • reuse generators

    - by wiso
    I need to check the central limit with dices. Rool D dices. Sum the results. Repeat the same thing for N times. Change D and repeat. There's no need to store random values so I want to use only generators. The problem is that generators are consuming, I can't resuging them more times. Now my code use explicit for and I don't like it. dice_numbers = (1, 2, 10, 100, 1000) repetitions = 10000 for dice_number in dice_numbers: # how many dice to sum sum_container = [] for r in range(repetitions): rool_sum = sum((random.randint(1,6) for _ in range(dice_number))) sum_container.append(rool_sum) plot_histogram(sum_container) I want to create something like for r in repetitions: rools_generator = (random.randint(1,6) for _ in range(dice_number) sum_generator = (sum(rools_generator) for _ in range(r)) but the second time I resuse rools_generator it is condumed. I need to construct generator class?

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  • "IOError [Errno 13] Permisson denied" when copy a file on Windows

    - by wong2
    Hi, I wrote a program that will copy a file called a.exe to C:/Windows/, then I pack it to exe with PyInstaller, and rename the exe file to a.exe. When I run the exe file, it output IOError [Errno 13] Permisson denied: 'C:/Windows/a.exe', but the file a.exe was copied to the directory C:/Windows. Then I ran it as the Administrator, it happened again... At first, I copy the file with shututil.copy, then I wrote a function myself(open a.exe, create a.exe under C:/Windows, read a.exe 's content and write to C:/Windows/a.exe, close all), but it doesn't help...Any ideas?

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  • How to append a tag after a link with BeaufitulSoup

    - by systempuntoout
    Starting from an Html input like this: <p> <a href="http://www.foo.com">this if foo</a> <a href="http://www.bar.com">this if bar</a> </p> using BeautifulSoup, i would like to change this Html in: <p> <a href="http://www.foo.com">this if foo</a><b>OK</b> <a href="http://www.bar.com">this if bar</a><b>OK</b> </p> Is it possible to do this using BeautifulSoup?

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  • Number guessing game (3+- guessed result)

    - by Nick Waring
    I've been assigned a task to create a game that generates 4 digits and the user has to guess the digits one at a time to get the correct result. If the number is correct a Y is displayed and if not, a N. This was easy, now the next step was to implement another two responses. If the answer is too high, a H is displayed and too low, an N. Again, was easy - now the third is to use the same design as game 2 but if the number is 3 higher than a H is displayed and same if it's 3 lower than a L is displayed - otherwise an X is displayed. I can't figure out how to do this. Here's my test code for game 2 for just one of the digits - any help is appreciated. (5 was used just for a test.) def guess(): x = 5 g= int(input("Guess the number: ")) if g == x: print("Y") elif g < x: print("L") else: print("H")

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  • Problems with sys.stdout.write() with time.sleep() in a function

    - by philipjkim
    What I wanted is printing out 5 dots that a dot printed per a second using time.sleep(), but the result was 5 dots were printed at once after 5 seconds delay. Tried both print and sys.stdout.write, same result. Thanks for any advices. import time import sys def wait_for(n): """Wait for {n} seconds. {n} should be an integer greater than 0.""" if not isinstance(n, int): print 'n in wait_for(n) should be an integer.' return elif n < 1: print 'n in wait_for(n) should be greater than 0.' return for i in range(0, n): sys.stdout.write('.') time.sleep(1) sys.stdout.write('\n') def main(): wait_for(5) # FIXME: doesn't work as expected if __name__ == '__main__': try: main() except KeyboardInterrupt: print '\nAborted.'

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  • Efficiently generate numpy array from list comprehension output?

    - by shootingstars
    Is there a more efficient way than using numpy.asarray() to generate an array from output in the form of a list? This appears to be copying everything in memory, which doesn't seem like it would be that efficient with very large arrays. (Updated) Example: import numpy as np a1 = np.array([1,2,3,4,5,6,7,8,9,10]) # pretend this has thousands of elements a2 = np.array([3,7,8]) results = np.asarray([np.amax(np.where(a1 > element)) for element in a2])

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