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  • Refining data stored in SQLite - how to join several contacts?

    - by Krab
    Problem background Imagine this problem. You have a water molecule which is in contact with other molecules (if the contact is a hydrogen bond, there can be 4 other molecules around my water). Like in the following picture (A, B, C, D are some other atoms and dots mean the contact). A B . . O / \ H H . . C D I have the information about all the dots and I need to eliminate the water in the center and create records describing contacts of A-C, A-D, A-B, B-C, B-D, and C-D. Database structure Currently, I have the following structure in the database: Table atoms: "id" integer PRIMARY KEY, "amino" char(3) NOT NULL, (HOH for water or other value) other columns identifying the atom Table contacts: "acceptor_id" integer NOT NULL, (the atom near to my hydrogen, here C or D) "donor_id" integer NOT NULL, (here A or B) "directness" char(1) NOT NULL, (this should be D for direct and W for water-mediated) other columns about the contact, such as the distance Current solution (insufficient) Now, I'm going through all the contacts which have donor.amino = "HOH". In this sample case, this would select contacts from C and D. For each of these selected contacts, I look up contacts having the same acceptor_id as is the donor_id in the currently selected contact. From this information, I create the new contact. At the end, I delete all contacts to or from HOH. This way, I am obviously unable to create C-D and A-B contacts (the other 4 are OK). If I try a similar approach - trying to find two contacts having the same donor_id, I end up with duplicate contacts (C-D and D-C). Is there a simple way to retrieve all six contacts without duplicates? I'm dreaming about some one page long SQL query which retrievs just these six wanted rows. :-) It is preferable to conserve information about who is donor where possible, but not strictly necessary. Big thanks to all of you who read this question to this point.

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  • DriverManager always returns my custom driver regardless of the connection URL

    - by JGB146
    I am writing a driver to act as a wrapper around two separate MySQL connections (to distributed databases). Basically, the goal is to enable interaction with my driver for all applications instead of requiring the application to sort out which database holds the desired data. Most of the code for this is in place, but I'm having a problem in that when I attempt to create connections via the MySQL Driver, the DriverManager is returning an instance of my driver instead of the MySQL Driver. I'd appreciate any tips on what could be causing this and what could be done to fix it! Below is a few relevant snippets of code. I can provide more, but there's a lot, so I'd need to know what else you want to see. First, from MyDriver.java: public MyDriver() throws SQLException { DriverManager.registerDriver(this); } public Connection connect(String url, Properties info) throws SQLException { try { return new MyConnection(info); } catch (Exception e) { return null; } } public boolean acceptsURL(String url) throws SQLException { if (url.contains("jdbc:jgb://")) { return true; } return false; } It is my understanding that this acceptsURL function will dictate whether or not the DriverManager deems my driver a suitable fit for a given URL. Hence it should only be passing connections from my driver if the URL contains "jdbc:jgb://" right? Here's code from MyConnection.java: Connection c1 = null; Connection c2 = null; /** *Constructors */ public DDBSConnection (Properties info) throws SQLException, Exception { info.list(System.out); //included for testing Class.forName("com.mysql.jdbc.Driver").newInstance(); String url1 = "jdbc:mysql://server1.com/jgb"; String url2 = "jdbc:mysql://server2.com/jgb"; this.c1 = DriverManager.getConnection( url1, info.getProperty("username"), info.getProperty("password")); this.c2 = DriverManager.getConnection( url2, info.getProperty("username"), info.getProperty("password")); } And this tells me two things. First, the info.list() call confirms that the correct user and password are being sent. Second, because we enter an infinite loop, we see that the DriverManager is providing new instances of my connection as matches for the mysql URLs instead of the desired mysql driver/connection. FWIW, I have separately tested implementations that go straight to the mysql driver using this exact syntax (al beit only one at a time), and was able to successfully interact with each database individually from a test application outside of my driver.

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  • Display query results like \G in MySQL when using Oracle / sqlplus?

    - by jed79
    In MySQL, you can use \G to run a query: select * from mytable\G And your results will be displayed in an inverted table, kinda like this: *************************** 1. row *************************** column1: 12345 another_colum: another value yet_another: ABCD *************************** 2. row *************************** column1: 238479 another_colum: another value again yet_another: WXYZ Is there any way to get a similar format using Oracle / sqlplus?

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  • Where are TFS Alerts stored in the TFS Databases? Receiving duplicate alerts after upgrade 2008 to

    - by MJ Hufford
    I recently performed a migration-upgrade from TFS 2008 to TFS 2010. Almost everything is working properly now. However, our team is getting duplicate emails now. I'm guessing this is because I used the TFS 2008 power tools to setup alerts. After the upgrade, I installed the TFS 2010 power tools and noticed that there were not alerts configured. I setup new alerts and now we get duplicates. Is it possible the old alerts configuration is floating around in the db somewhere?

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  • Easiest way to export longitude and latitude data stored in a SQLite database to a file so it can be

    - by LordSnoutimus
    Hello, I have created an application that records a series of longitude and latitude values in a SQLite database and display them as a coloured track on a MapActivity. I now want to be able to export this data somehow (preferably to a file) so a user can upload the values to a website showing a Google Map API. My question is: what would be the quickest way to export the data (and in what file format: GPX, XML, CSV) to the SD card located on the Android device. Many thanks.

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  • Action Mailer: How do I render dynamic data in an email body that is stored in the database?

    - by Brandon Toone
    I have Action Mailer setup to render an email using the body attribute of my Email model (in the database). I want to be able to use erb in the body but I can't figure out how to get it to render in the sent email message. I'm able to get the body as a string with this code # models/user_mailer.rb def custom_email(user, email_id) email = Email.find(email_id) recipients user.email from "Mail It Example <[email protected]>" subject "Hello From Mail It" sent_on Time.now # pulls the email body and passes a string to the template views/user_mailer/customer_email.text.html.erb body :msg => email.body end I came across this article http://rails-nutshell.labs.oreilly.com/ch05.html which says I can use render but I'm only able to get render :text to work and not render :inline # models/user_mailer.rb def custom_email(user, email_id) email = Email.find(email_id) recipients user.email from "Mail It Example <[email protected]>" subject "Hello From Mail It" sent_on Time.now # body :msg => email.body body :msg => (render :text => "Thanks for your order") # renders text and passes as a variable to the template # body :msg => (render :inline => "We shipped <%= Time.now %>") # throws a NoMethodError end

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  • How to display some data differnetly than it is stored.

    - by Ben
    Hello, I seem to have a problem that I can't find a solution for. I have a table that has this format. projectId | departmentId | plan | ETC | month | year | ID But, I need to find a way to take that data and display it like this. Since this is my first time here I can't upload an image, but you can view it here. http://img85.imageshack.us/img85/8253/image004y.png Is this something a gridview can handle, or a repeater, or something else? Thank you. Ben

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  • How do I find useful code previously deleted but still stored in source control?

    - by sharptooth
    Whenever someone asks what to do with code that is no longer needed the answer is usually "delete it, restore it from source control if you need it back". Now how do I find that piece of source code in the repository? Let's limit scope to SVN for simplicity - I suspect that using any other source control system will not make much difference in this aspect (correct me if I'm wrong). If I delete that code and commit the changes it will no longer be in the latest revision. How do I find it without exporting each revision and searching thoroughly (which is nearly impossible)?

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  • Where in an Eclipse workspace is the list of projects stored?

    - by Kris Pruden
    I use eclipse with "external" projects - i.e. projects created from existing source. Poking around in the workspace files, I cannot find any reference to these projects. My question is: how does eclipse keep track of these projects? I'd like to be able to add such a project to the workspace automatically (by generating .project and .classpath files)..

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  • Why are a visual studio project's command-line settings stored per user? Is it OK to check-in (and

    - by DanO
    We're creating an application that understands some command-line parameters. There are some default's we would like to supply on the command-line when debugging, and these are easily set in the project settings as explained here. The thing is visual studio stores these settings in a *.csproj.user file, and the default settings for integrated source control do not check-in *.user files. We would like to just have these default command-line parameters in everyone's IDE when debugging this project. Often (but not always) when visual studio guides you into doing things a certain way it is for good reason. We probably don't want to just check-in someone's .csproj.user file... right? This question is has a few parts: Why does Visual Studio store this particular setting per user? Is there a way to alter this behavior? - Would doing so bring bad juju? Under these circumstances is it OK to check-in and share a .user file? Is there a better way to accomplish what we are trying to do here? Thank you -

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  • How to make Emacs sql-mode recognize MySQL #-style comments?

    - by Ken
    I'm reading a bunch of MySQL files that use # (to end-of-line) comments, but my sql-mode doesn't support them. I found the syntax-table part of sql.el that defines /**/ and -- comments, but according to this, Emacs syntax tables support only 2 comment styles. Is there a way to add support for # comments in sql.el easily?

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  • XSLT question, how to transform xml when I have xslt file stored, but object in mem?

    - by JL
    I have a function that takes 2 parameters : 1 = XML file, 2 = XSLT file, then performs a transformation and returns the resulting HTML. Here is the function: /// <summary> /// Will apply an XSLT style to any XML file and return the rendered HTML. /// </summary> /// <param name="xmlFileName"> /// The file name of the XML document. /// </param> /// <param name="xslFileName"> /// The file name of the XSL document. /// </param> /// <returns> /// The rendered HTML. /// </returns> public string TransformXml(string xmlFileName, string xslFileName) { var xtr = new XmlTextReader(xmlFileName) { WhitespaceHandling = WhitespaceHandling.None }; var xd = new XmlDocument(); xd.Load(xtr); var xslt = new System.Xml.Xsl.XslCompiledTransform(); xslt.Load(xslFileName); var stm = new MemoryStream(); xslt.Transform(xd, null, stm); stm.Position = 1; var sr = new StreamReader(stm); xtr.Close(); return sr.ReadToEnd(); } I want to change the function not to accept a file name, but rather a strongly typed object de-serialized (now in the form of a variable). Is this possible? So keep the xslt coming from a file, but the xml input should be a the serialized xml of the object I pass, and I want to do this without file system IO.

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  • Reading and decoding PDF-417 barcodes stored in an image or PDF file from within a .NET application

    - by John Rasch
    I am looking for a .NET library that is able to decode data from a PDF-417 barcode that is embedded either in an image file or PDF. At this point, I have only been able to find a Java version and a C version. Ideally, this library would be both open-source and free of charge, but I doubt such a decoder exists. I am open to trying out demos of existing products that you may have had experience with - which leads me to the question - have you had any experience reading PDF-417 barcodes embedded in images or PDFs using .NET, and which of the available products would you recommend to do so?

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  • JMeter CSV Data Set is corrupting Japanese strings stored as proper UTF-8, I get Question Marks instead

    - by Mark Bennett
    I read in search terms from a simple text file to send to a search engine. It works fine in English, but gives me ???? for any Japanese text. Text with mixed English and Japanese does show the English text, so I know it's reading it. What I'm seeing: Input text: Snow Leopard ??????????????? Turns into: Snow Leopard ??????????????? This is in my POST field of an HTTP. If I set JMeter to encode the data, it just puts in the percent sequence for question marks. Interesting note: In the example above there are 15 Japanese characters, and then 15 question marks, so at some point it's being seen as full characters and not just bytes. About the Data: The CSV file is very simple in structure. There's only one field / one column, which I name TERM, and later use as ${TERM} I don't really need full CSV because it's only one string per line. There's no commas or quotes. When I run the Unix "file" command on the file, it says UTF-8 text. I've also verified it in command line and graphical mode on two machines. JMeter CSV Dataset Config: Filename: japanese-searches.csv File encoding: UTF-8 (also tried without) Variable names: TERM Delimiter: , Allow Quoted Data: False (I also tried True, different, but still wrong) Recycle at EOF: True Stop at EOF: False Staring mode: All threads A few things I've tried: Tried Allow quoted Data. It changed to other strange characters. -Dfile.encoding=UTF-8 Tried encoding the POST, but it just turned into a bunch of %nn for question marks And I'm not sure how "debug" just after the each line of the CSV is read in. I think it's corrupted right away, but I'm not sure. If it's only mangled when I reference it, then instead of ${TERM} perhaps there's some other "to bytes" function call. I'll start checking into that. I haven't done anything with the JMeter functions yet.

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  • How to assign Value to Key in App.config of C# win app ?

    - by karthik
    I am using the below string in my code : string AAR_FilePath = "\"C:\\MySQL\\MySQL Server 5.0\\bin\\mysqldump\""; which i dont want to hardcore in my code. So i need to use that in my app.config I tried to give the same value as, <add key="Path_SqlDump" value="\"C:\\MySQL\\MySQL Server 5.0\\bin\\mysqldump\""></add> But the above gives me error, because of the quotes. All i need is, i should be able to assign "\"C:\MySQL\MySQL Server 5.0\bin\mysqldump\"" to a string. HOW ?

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  • Strategy to keep track of stored files in the documents directory?

    - by mystify
    In my app, the user can save his input to disk. This is done with NSKeyedArchiver. Currently I simply name my files with a timestamp. But of course, the user may want to load one of them back in to keep on editing them. What would be the most reliable / safe strategy to keep track of those files? I need to present the user a list of those files, so that he can choose one to open. Currently I think of making an archived NSMutableArray which simply stores the file names, but I feel that this strategy is not really good. We all know when we save files sometimes something goes wrong, and this seems very likely to get currupted easily, or not? How would you do it?

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  • How can you tell if an activities state is stored?

    - by Joren
    I have an activity which pulls some JSON from my server, and then uses it to draw a list. That list launches further activities. My problem is that I can't figure out a way to tell if the activity is still alive when you go back to it, so I end up re-querying my JSON from the server and redrawing the list every time the user goes back to the activity. How can I tell if my activity is still alive so I can skip the redraw?

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  • How do i structure my SQL Database (tables, Schemas, users, stored procedures etc.) to prepare it fo

    - by AlexRednic
    I think the title is self explanatory. What I'm looking for is material so I can further my knowledge. I've never developed a full application before so building one from scratch is a bit overwhelming for me. And the first bump in the road is the database. Websites, articles, books, elaborate answers, anything will do as long as they keep me on the right track. Thanks

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