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• Matching Strings: a biological perspective

  - by sun

  Write a function, called constrainedMatchPair which takes three arguments: a tuple representing starting points for the first substring, a tuple representing starting points for the second substring, and the length of the first substring. The function should return a tuple of all members (call it n) of the first tuple for which there is an element in the second tuple (call it k) such that n+m+1 = k, where m is the length of the first substring. Complete the definition def constrainedMatchPair(firstMatch,secondMatch,length):

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• High performance SSL client with connection pooling session caching etch on Windows

  - by Yucong Sun

  Hi there, I'm looking for a fast SSL socket client basically talks SSL with remote service and I need features like connection pooling/limiting so that my other client calling this ssl socket can basically issue as many as requests and it will handle it peacefully. I looked into openssl s_client, but it says it's only for testing purpose, is there a handy tool avaiable? STunnel seems to be okay, but don't have that connection limiting option I need. Cheers.

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• INS-40719 error when Install Oracle RAC?

  - by Data-Base

  I'm tying to (learn how to) install Oracle RAC 11g on CentOS 6 all went OK so far but I get INS-40719 Error message regarding SCAN Name I do not have DNS server and I'm not going to try to use it on this setup I add this line to /etc/hosts 192.168.244.100 rac-cluster then used "rac-cluster" as the SCAN name and it's still not working with the same error message! any one can guide me on how to make it work? 1- do I have to add "192.168.244.100 rac-cluster" to /etc/hosts on both nodes? 2- do I need to edit/add any thing else on the nodes? cheers

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• Can I have different ESX hosts accessing the same LUN over different protocols?

  - by Kevin Kuphal

  I currently have a cluster of two ESX 3.5U2 servers connected directly via FiberChannel to a NetApp 3020 cluster. These hosts mount four VMFS LUNs for virtual machine storage. Currently these LUNs are only made available via our FiberChannel initator in the Netapp configuration If I were to add an ESXi host to the cluster for internal IT use can I: Make the same VMFS LUNs available via the iSCSI initiator on the Netapp Connect this ESXi host to those LUNs via iSCSI Do all of this while the existing two ESX hosts are connected to those LUNs via FiberChannel Does anyone have experience with this type of mixed protocol environment, specifically with Netapp?

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• GlassFish will not start when SNMP is enabled

  - by edarc

  I have a GlassFish v3 app server running on 64-bit Debian Lenny. Everything is running fine, except I would like to monitor GF's JVM instance with SNMP. However, every time I try to enable it by adding the following <jvm-options> in domain.xml: -Dcom.sun.management.snmp.port=10161 -Dcom.sun.management.snmp.acl.file=/path/to/snmp.acl -Dcom.sun.management.snmp.interface=127.0.0.1 GlassFish refuses to start: $ asadmin start-domain Waiting for DAS to start .Error starting domain: default. The server exited prematurely with exit code 1. Command start-domain failed. $ There is also nothing illuminating (well, really nothing at all) in jvm.log or server.log. The snmp.acl file contains: acl = { { communities = public access = read-only managers = localhost } } and is chmod 600 (I know this is not the problem because it will actually fail with an error about the permissions if it is set to anything other than 600) $ java -version java version "1.6.0_0" OpenJDK Runtime Environment (build 1.6.0_0-b11) OpenJDK 64-Bit Server VM (build 1.6.0_0-b11, mixed mode)

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• Unexpected "Connection timed out: proxy connect" lines in Apache error.log

  - by Gregg Lind

  I see some unexpected lines in my Apache (1.3!) error.log. What is happening here? My isp has complained in the past about proxying attempts... how do I check for them? [Sun Apr 4 16:43:32 2010] [error] [client 60.173.11.34] (110)Connection timed out: proxy connect to 61.132.221.146 port 80 failed [Sun Apr 4 16:44:11 2010] [error] [client 60.173.11.34] (110)Connection timed out: proxy connect to 61.132.221.146 port 80 failed [Sun Apr 4 16:45:34 2010] [error] [client 79.2.28.220] (110)Connection timed out: proxy connect to 203.212.171.170 port 80 failed (If more information would be useful, please ask me to clarify!)

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• JVM memory initializazion error after windows update

  - by gianni

  We have three Windows Server 2003 with 2 GB RAM. Server1 tomcat 5.5.25 jvm version SUN 1.6.0_11-b03 Server2 tomcat 5.5.25 jvm version SUN 1.6.0_14-b08 Server3 tomcat 6.0.18 jvm version SUN 1.6.0_14-b08 For the three servers JVM parameters are: -XX:MaxPermSize=256m -Dcatalina.base=C:\Programmi\Apache Group\apache-tomcat-5.5.25 -Dcatalina.home=C:\Programmi\Apache Group\apache-tomcat-5.5.25 -Djava.endorsed.dirs=C:\Programmi\Apache Group\apache-tomcat-5.5.25\common\endorsed -Djava.io.tmpdir=C:\Programmi\Apache Group\apache-tomcat-5.5.25\temp vfprintf -Xms512m -Xmx1024m For some months everithing worked fine. Last friday we installed some windows updates. After the reboot tomcat doesnt start with error: Error occurred during initialization of VM Could not reserve enough space for object heap We reduced the parameter -Xmx1024m to -Xmx768m and now tomcat starts. But we need greater max heap size What happened to our servers ? Thanks in advance.

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• Unable to access virtaul IP after configuring NLB in windows 2008

  - by krish

  I have Two webseervers(WS1, WS2). I have added NLB component on both the machines. In WS1, i have added a cluster with IP as (eg:xx.yy.zz.100) and added WS1, WS2 to the same cluster. Now i have deployed application in WS1& WS2 and tried accessing the cluster IP address from WS1 and WS2. App opened. Now i have test machine which is in the same domain of WS1 and WS2. I tried accessing the application with clustered IP in the test machine, it did not work.However it is working when accessed with the dedicated IP of WS1 and WS2. But for making NLB i have to access the app with clusted IP. Help asap would be appriciated.

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• Doubts about Cloud Infrastructure

  - by Pravin

  Maybe a little more of the same questions that others have asked but wanted to clarify my doubt, for some years run my hosting company (reseller of esds) and I've done well so far, but I am determined to bring quality and server technology to offer another level. So far I have understood that there is a difference between cloud and cluster servers because the cluster function as load balancers that distribute in different servers roles and use the servers less overloaded in the cloud is the union of multiple servers and then the same is vitualized unlike the cluster that is allowed to use the resources of the CPU and RAM servers in the virtualized environment. My approach is to use 3 dedicated servers to create a cloud server, My doubts: Does this type of cloud servers are only reserved for big companies? (Either because the union of the servers is done by hardware or software with high price) What characteristics should these servers meet? Possibly through software which should be used? Available? Thanks for your time, Cheers!

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• php file downloads instead of being processed with ajax on apache

  - by eagleon

  I have a small website where some content is displayed within a HTML tag using AJAX. The content is simply taken from another page on the same web site. However, sometimes instead of loading the parsed PHP file, the browser displays a download box instead. I downloaded the file and this is what it looks like a text file mixed with binary or gzipped data. I can't paste the binary stuff here, but here are some of the headers: Jul 2012 18:52:16 GMT Server: Apache/2 X-Powered-By: PHP/5.3.10 Content-Encoding: gzip Vary: Accept-Encoding,User-Agent Keep-Alive: timeout=1, max=95 Connection: Keep-Alive Transfer-Encoding: chunked Content-Type: text/html HTTP/1.1 304 Not Modified Date: Sun, 01 Jul 2012 18:52:16 GMT Server: Apache/2 Connection: Keep-Alive Keep-Alive: timeout=1, max=93 ETag: "2fc857-409-4c39691c59b40" HTTP/1.1 304 Not Modified Date: Sun, 01 Jul 2012 18:52:16 GMT Server: Apache/2 Connection: Keep-Alive Keep-Alive: timeout=1, max=92 ETag: "2fc854-3e5-4c39691b65900" HTTP/1.1 304 Not Modified Date: Sun, 01 Jul 2012 18:52:16 GMT Server: Apache/2 Connection: Keep-Alive Keep-Alive: timeout=1, max=91 ETag: "2fc847-3e3-4c3969197d480" and large blocks of stuff like this: µàl]&BaËÜk#ìÏ

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• re-point LM to a new vCenter (share same database)

  - by CapiZikus

  1) I'm planning to create a new vCenter server which database point to the same db as current vCenter (the one LM pointing to atm), Then I'm planning to repoint the LM to a new vCenter, ( the new one will see the same esx host, datastore, etc) Is LM will be okay if I do this? 2) The currect VC is a dediated server and a new vCenter will be VM, the current vCenter has database installed on local machine (inc update manager as well) I'm planning to move the local db to cluster db then point the current vCenter to this new cluster and make sure everything is working before promote a new one. Update manager will also has it own VM and point to a new db cluster. Is anythingelse I miss out or need to pay more attention on? thanks

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• Hyper-V 2012 and P2000 SAS SAN

  - by user155950

  Hi I am having major problems setting up a Hyper-V 2012 cluster on a P2000 SAS SAN. Running System Center VMM 2012 SP1 I am unable to see any storage to create my cluster. Has anyone had experienced anything similar? Under fabric and storage I can't add the P2000, all I can do is use storage spaces in server manager to create a storage pool and virtual disk. This allows me to create a file share which I can add to VMM but I still can't see any disk to create a cluster. I am just about at the point where I want to tear my hair out wipe the servers and stick VMware on them because I know it works as I have set several systems up like this in the past. The Hyper-V servers can see the storage and in server manager on my management machine it seems to know both servers can see the same disk. VMM is running on the same machine and it can't see any disk. Help..... Thanks Mike

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• JBoss thrown error looking up local address when starting

  - by Jeeba

  Hello im installing a fresh Jboss 5.1 in a Centos 5.5 machine. I dont have Apache installed. So when I try to start jboss using the comand ./run.sh I get the following error 15:13:57,414 INFO [JMXKernel] Legacy JMX core initialized 15:14:03,856 ERROR [ServerInfo] Error looking up local address java.net.UnknownHostException: dhcppc1: dhcppc1 at java.net.InetAddress.getLocalHost(InetAddress.java:1354) at org.jboss.system.server.ServerInfo.getHostAddress(ServerInfo.java:364) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) .... After that i can run Jboss only from 127.0.0.1:8080 but using localhost:8080 doesnt work. I think its a centos configuration problem but im a total newbye managing ports and maybe firewalls, so what do you think could be the problem?

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• sshd running but no PID file

  - by dunxd

  I'm recently started using monit to monitor the status of sshd on my CentOS 5.4 server. This works fine, but every so often monit reports that sshd is no longer running. This isn't true - I am still able to login to the server via ssh, however I note the following: There is no longer any PID file at /var/run/sshd.pid - after a reboot this file exists. Once it is gone, restarting sshd via service sshd restart does not create the PID file. sudo service sshd status reports openssh-daemon is stopped - again, restarting sshd does not change this, but a reboot does. sudo service sshd stop reports failed, presumably because of the missing PID file. Any idea what is going on? Update sudo netstat -lptun gives the following output relating to port 22 tcp 0 0 :::22 :::* LISTEN 20735/sshd Killing the process with this PID as suggested by @Henry and then starting sshd via service results in service sshd status recognising the process by PID again. Would still like to understand this better. RPM verify suggested by a couple of answerers shows this: sudo rpm -vV openssh openssh-server openssh-clients | grep 'S\.5' S.5....T c /etc/pam.d/sshd S.5....T c /etc/ssh/sshd_config /etc/pam.d/sshd has the following contents: #%PAM-1.0 auth include system-auth account required pam_nologin.so account include system-auth password include system-auth session optional pam_keyinit.so force revoke session include system-auth #session required pam_loginuid.so Should that last line be commented out? Update Here's the output of @YannickGirouard 's script: $ sudo ./sshd_test Searching for the process listening on port 22... Found the following PID: 21330 Command line for PID 21330: /usr/sbin/sshd Listing process(es) relating to PID 21330: UID PID PPID C STIME TTY TIME CMD root 21330 1 0 14:04 ? 00:00:00 /usr/sbin/sshd Listing RPM information about openssh packages: Name : openssh Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:50:57 AM GMT Build Host: builder10.centos.org Group : Applications/Internet Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 745390 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH implementation of SSH protocol versions 1 and 2 ------------------------------------------------------ Name : openssh-clients Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:51:04 AM GMT Build Host: builder10.centos.org Group : Applications/Internet Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 871132 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH client applications ------------------------------------------------------ Name : openssh-server Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:51:04 AM GMT Build Host: builder10.centos.org Group : System Environment/Daemons Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 492478 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH server daemon ------------------------------------------------------ However, I've since got things working by killing the process and starting afresh, as suggested by @Henry below, so perhaps I am no longer seeing the same thing. Will try again if I am seeing the issue again after next reboot. Update - 14 March Monit alerted me that sshd had disappeared, and again I am able to ssh onto the server. So now I can run the script $ sudo ./sshd_test Searching for the process listening on port 22... Found the following PID: 2208 Command line for PID 2208: /usr/sbin/sshd Listing process(es) relating to PID 2208: UID PID PPID C STIME TTY TIME CMD root 2208 1 0 Mar13 ? 00:00:00 /usr/sbin/sshd root 1885 2208 0 21:50 ? 00:00:00 sshd: dunx [priv] Listing RPM information about openssh packages: Name : openssh Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:50:57 AM GMT Build Host: builder10.centos.org Group : Applications/Internet Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 745390 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH implementation of SSH protocol versions 1 and 2 ------------------------------------------------------ Name : openssh-clients Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:51:04 AM GMT Build Host: builder10.centos.org Group : Applications/Internet Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 871132 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH client applications ------------------------------------------------------ Name : openssh-server Relocations: (not relocatable) Version : 4.3p2 Vendor: CentOS Release : 72.el5_7.5 Build Date: Tue 30 Aug 2011 12:34:14 AM BST Install Date: Sun 06 Nov 2011 12:51:04 AM GMT Build Host: builder10.centos.org Group : System Environment/Daemons Source RPM: openssh-4.3p2-72.el5_7.5.src.rpm Size : 492478 License: BSD Signature : DSA/SHA1, Fri 02 Sep 2011 01:13:01 AM BST, Key ID a8a447dce8562897 URL : http://www.openssh.com/portable.html Summary : The OpenSSH server daemon ------------------------------------------------------ Again, when I look for /var/run/sshd.pid I don't find it. $ cat /var/run/sshd.pid cat: /var/run/sshd.pid: No such file or directory $ sudo netstat -anp | grep sshd tcp 0 0 0.0.0.0:22 0.0.0.0:* LISTEN 2208/sshd $ sudo kill 2208 $ sudo service sshd start Starting sshd: [ OK ] $ cat /var/run/sshd.pid 3794 $ sudo service sshd status openssh-daemon (pid 3794) is running... Is it possible that sshd is restarting and not creating a pidfile for some reason?

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• HAProxy NGInx SSL setup

  - by Niclas

  I've been looking around different setups for a server cluster supporting SSL and I would like to benchmark my idea with you. Requirements: All servers in the cluster should be under the same full domain name. (http and https) Routing to subsystems is done on URI matching in HA proxy. All URIs have support for SSL support. Wish: Centralizing routing rules ---<----http-----<-- | | Inet -->HA--+---https--->NGInx_SSL_1..N | | +---http---> Apache_1..M | +---http---> NodeJS Idea: Configure HA to route all SSL traffic (mode=tcp,algorithm=Source) to an NGInx cluster turning https traffic into http. Re-pass the http traffic from NGInx to the HA for normal load-balancing which performs load balancing based on HA config. My question is simply: Is this the best way to to configure based on requirements above?

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• JVM memory initializazion error after windows update

  - by gianni

  We have three Windows Server 2003 with 2 GB RAM. Server1 tomcat 5.5.25 jvm version SUN 1.6.0_11-b03 Server2 tomcat 5.5.25 jvm version SUN 1.6.0_14-b08 Server3 tomcat 6.0.18 jvm version SUN 1.6.0_14-b08 For the three servers JVM parameters are: -XX:MaxPermSize=256m -Dcatalina.base=C:\Programmi\Apache Group\apache-tomcat-5.5.25 -Dcatalina.home=C:\Programmi\Apache Group\apache-tomcat-5.5.25 -Djava.endorsed.dirs=C:\Programmi\Apache Group\apache-tomcat-5.5.25\common\endorsed -Djava.io.tmpdir=C:\Programmi\Apache Group\apache-tomcat-5.5.25\temp vfprintf -Xms512m -Xmx1024m For some months everithing worked fine. Last friday we installed some windows updates. After the reboot tomcat doesnt start with error: Error occurred during initialization of VM Could not reserve enough space for object heap We reduced the parameter -Xmx1024m to -Xmx768m and now tomcat starts. But we need greater max heap size What happened to our servers ? Thanks in advance.

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• Can't update scala on Gentoo

  - by xhochy

  As I wanted to test Scala 2.9.2 on my gentoo system I tried updated the package but ended up with this error. I can't figure out where the problem may be: Calculating dependencies ...... done! >>> Verifying ebuild manifests >>> Jobs: 0 of 1 complete, 1 running Load avg: 0.23, 0.16, 0.20 >>> Emerging (1 of 1) dev-lang/scala-2.9.2 >>> Jobs: 0 of 1 complete, 1 running Load avg: 0.23, 0.16, 0.20 >>> Failed to emerge dev-lang/scala-2.9.2, Log file: >>> Jobs: 0 of 1 complete, 1 running Load avg: 0.23, 0.16, 0.20 >>> '/var/tmp/portage/dev-lang/scala-2.9.2/temp/build.log' >>> Jobs: 0 of 1 complete, 1 running Load avg: 0.23, 0.16, 0.20 >>> Jobs: 0 of 1 complete, 1 running, 1 failed Load avg: 0.23, 0.16, 0.20 >>> Jobs: 0 of 1 complete, 1 failed Load avg: 0.23, 0.16, 0.20 * Package: dev-lang/scala-2.9.2 * Repository: gentoo * Maintainer: [email protected] * USE: amd64 elibc_glibc kernel_linux multilib userland_GNU * FEATURES: sandbox [01m[31;06m!!! ERROR: Couldn't find suitable VM. Possible invalid dependency string. Due to jdk-with-com-sun requiring a target of 1.7 but the virtual machines constrained by virtual/jdk-1.6 and/or this package requiring virtual(s) jdk-with-com-sun[0m * Unable to determine VM for building from dependencies: NV_DEPEND: virtual/jdk:1.6 java-virtuals/jdk-with-com-sun !binary? ( dev-java/ant-contrib:0 ) app-arch/xz-utils >=dev-java/java-config-2.1.9-r1 source? ( app-arch/zip ) >=dev-java/ant-core-1.7.0 dev-java/ant-nodeps >=dev-java/javatoolkit-0.3.0-r2 >=dev-lang/python-2.4 * ERROR: dev-lang/scala-2.9.2 failed (setup phase): * Failed to determine VM for building. * * Call stack: * ebuild.sh, line 93: Called pkg_setup * scala-2.9.2.ebuild, line 43: Called java-pkg-2_pkg_setup * java-pkg-2.eclass, line 53: Called java-pkg_init * java-utils-2.eclass, line 2187: Called java-pkg_switch-vm * java-utils-2.eclass, line 2674: Called die * The specific snippet of code: * die "Failed to determine VM for building." * * If you need support, post the output of `emerge --info '=dev-lang/scala-2.9.2'`, * the complete build log and the output of `emerge -pqv '=dev-lang/scala-2.9.2'`. !!! When you file a bug report, please include the following information: GENTOO_VM= CLASSPATH="" JAVA_HOME="" JAVACFLAGS="" COMPILER="" and of course, the output of emerge --info * The complete build log is located at '/var/tmp/portage/dev-lang/scala-2.9.2/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/scala-2.9.2/temp/die.env'. * Working directory: '/var/tmp/portage/dev-lang/scala-2.9.2' * S: '/var/tmp/portage/dev-lang/scala-2.9.2/work/scala-2.9.2-sources' * Messages for package dev-lang/scala-2.9.2: * Unable to determine VM for building from dependencies: * ERROR: dev-lang/scala-2.9.2 failed (setup phase): * Failed to determine VM for building. * * Call stack: * ebuild.sh, line 93: Called pkg_setup * scala-2.9.2.ebuild, line 43: Called java-pkg-2_pkg_setup * java-pkg-2.eclass, line 53: Called java-pkg_init * java-utils-2.eclass, line 2187: Called java-pkg_switch-vm * java-utils-2.eclass, line 2674: Called die * The specific snippet of code: * die "Failed to determine VM for building." * * If you need support, post the output of `emerge --info '=dev-lang/scala-2.9.2'`, * the complete build log and the output of `emerge -pqv '=dev-lang/scala-2.9.2'`. * The complete build log is located at '/var/tmp/portage/dev-lang/scala-2.9.2/temp/build.log'. * The ebuild environment file is located at '/var/tmp/portage/dev-lang/scala-2.9.2/temp/die.env'. * Working directory: '/var/tmp/portage/dev-lang/scala-2.9.2' * S: '/var/tmp/portage/dev-lang/scala-2.9.2/work/scala-2.9.2-sources' The following eix output may help: % eix java-virtuals/jdk-with-com-sun [I] java-virtuals/jdk-with-com-sun Available versions: 20111111 {{ELIBC="FreeBSD"}} Installed versions: 20111111(16:08:51 18/04/12)(ELIBC="-FreeBSD") Homepage: http://www.gentoo.org Description: Virtual ebuilds that require internal com.sun classes from a JDK Both virtual jdks 1.6 and 1.7 are installed: % eix virtual/jdk [I] virtual/jdk Available versions: (1.4) ~1.4.2-r1[1] (1.5) 1.5.0 ~1.5.0-r3[1] (1.6) 1.6.0 1.6.0-r1 (1.7) (~)1.7.0 Installed versions: 1.6.0-r1(1.6)(23:22:48 10/11/12) 1.7.0(1.7)(23:21:09 10/11/12) Description: Virtual for JDK [1] "java-overlay" /var/lib/layman/java-overlay

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• VMWARE V2V migration without shared storage

  - by TheCleaner

  I would like to do the following: Take Physical box running w2k8r2 and Sql2008R2 and do a P2V on it to a 4.1 Enterprise licensed cluster. --no worries here, I can do that part-- Take the existing physical box that is freed up and install vmware hypervisor 5.0 on it. --again I can do this part-- Do a v2v migration of the VM created in step #1 above from the Enterprise 4.1 Cluster to the standalone host. They are NOT using shared storage. Step #3 is where I'm confused as to what my best option is. I found an article online talking about using Veeam FastSCP and just shutting down the vm on the cluster, removing it from inventory, copying the files over to the new host and then adding it to inventory. Is that the best way to accomplish this?

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• Amazon EC2 hostnames

  - by Firefly

  I'm currently trying to setup a Tigase cluster on Amazon EC2 instances in a VPC and I'm having troubles getting it to work due to the hostnames of the instances not being "full DNS names". According to the Tigase documentation: Please note the proper DNS configuration is critical for the cluster to work correctly. Make sure the 'hostname' command returns a full DNS name on each cluster node. Can anyone explain what a full DNS name is and how I can set my instances to use one? Currently my instances get a default hostname of the form "ip-10-0-0-20".

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• Error installing Java on Ubuntu Server

  - by Camran

  I get this error almost when installation is finished: /proc is not mounted; some java apps may fail Could not create the Java virtual machine. Error occurred during initialization of VM Could not reserve enough space for object heap Ignoring error generating classes.jsa Why is this? I just entered sudo apt-get install sun-java6-jre sun-java6-plugin sun-java6-fonts Is there something I must do first? What is Proc? If you need more input let me know. Thanks

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• Converted VmWare Image does not boot in Virtual Box

  - by vBox Question

  I have a .vddx virtual image which boots in VmWare, but I'm having trouble getting it to work with Sun Virtual Box. In Sun Virtual Box, I created a new Virtual Machine and pointed it at the vddx file from VmWare. When I try to boot the virtual machine, Sun Virtual Box says that the volume is not bootable. VmWare is able to boot from this virtual machine. Does anyone have any suggestions about what might be causing the problem? Is there a conversion utility that I need to run? Any debugging options that I could turn on?

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• Tomcat 6, JPA and Data sources

  - by asrijaal

  Hi there, I'm trying to get a data source working in my jsf app. I defined the data source in my web-apps context.xml webapp/META-INF/context.xml <?xml version="1.0" encoding="UTF-8"?> <Context antiJARLocking="true" path="/Sale"> <Resource auth="Container" driverClassName="com.mysql.jdbc.Driver" maxActive="20" maxIdle="10" maxWait="-1" name="Sale" password="admin" type="javax.sql.DataSource" url="jdbc:mysql://localhost/sale" username="admin"/> </Context> web.xml <?xml version="1.0" encoding="UTF-8"?> <web-app version="2.5" xmlns="http://java.sun.com/xml/ns/javaee" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://java.sun.com/xml/ns/javaee http://java.sun.com/xml/ns/javaee/web-app_2_5.xsd"> <filter> <display-name>RichFaces Filter</display-name> <filter-name>richfaces</filter-name> <filter-class>org.ajax4jsf.Filter</filter-class> </filter> <filter-mapping> <filter-name>richfaces</filter-name> <servlet-name>Faces Servlet</servlet-name> <dispatcher>REQUEST</dispatcher> <dispatcher>FORWARD</dispatcher> <dispatcher>INCLUDE</dispatcher> </filter-mapping> <servlet> <servlet-name>Faces Servlet</servlet-name> <servlet-class>javax.faces.webapp.FacesServlet</servlet-class> <load-on-startup>1</load-on-startup> </servlet> <servlet-mapping> <servlet-name>Faces Servlet</servlet-name> <url-pattern>/faces/*</url-pattern> </servlet-mapping> <session-config> <session-timeout> 30 </session-timeout> </session-config> <welcome-file-list> <welcome-file>faces/welcomeJSF.jsp</welcome-file> </welcome-file-list> <context-param> <param-name>org.richfaces.SKIN</param-name> <param-value>ruby</param-value> </context-param> </web-app> and my persistence.xml <?xml version="1.0" encoding="UTF-8"?> <persistence version="1.0" xmlns="http://java.sun.com/xml/ns/persistence" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://java.sun.com/xml/ns/persistence http://java.sun.com/xml/ns/persistence/persistence_1_0.xsd"> <persistence-unit name="SalePU" transaction-type="RESOURCE_LOCAL"> <provider>oracle.toplink.essentials.PersistenceProvider</provider> <non-jta-data-source>Sale</non-jta-data-source> <class>org.comp.sale.AnfrageAnhang</class> <class>org.comp.sale.Beschaffung</class> <class>org.comp.sale.Konto</class> <class>org.comp.sale.Anfrage</class> <exclude-unlisted-classes>false</exclude-unlisted-classes> </persistence-unit> </persistence> But no data source seems to be created by Tomcat, I only get this exception Exception [TOPLINK-7060] (Oracle TopLink Essentials - 2.0.1 (Build b09d-fcs (12/06/2007))): oracle.toplink.essentials.exceptions.ValidationException Exception Description: Cannot acquire data source [Sale]. Internal Exception: javax.naming.NameNotFoundException: Name Sale is not bound in this Context The needed jars for the MySQL driver are included into the WEB-INF/lib dir. What I'm doing wrong?

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• Cannot connect to MySQL with JDBC - Connection Timeout - Ubuntu 9.04

  - by gav

  I am running Ubuntu and am ultimately trying to connect Tomcat to my MySQL database using JDBC. It has worked previously but after a reboot the instance now fails to connect. Both Tomcat 6 and MySQL 5.0.75 are on the same machine Connection string: jdbc:mysql:///localhost:3306 I can connect to MySQL on the command line using the mysql command The my.cnf file is pretty standard (Available on request) has bind address: 127.0.0.1 I cannot Telnet to the MySQL port despite netstat saying MySQL is listening I have one IpTables rule to forward 80 - 8080 and no firewall I'm aware of. I'm pretty new to this and I'm not sure what else to test. I don't know whether I should be looking in etc/interfaces and if I did what to look for. It's weird because it used to work but after a reboot it's down so I must have changed something.... :). I realise a timeout indicates the server is not responding and I assume it's because the request isn't actually getting through. I installed MySQL via apt-get and Tomcat manually. MySqld processes root@88:/var/log/mysql# ps -ef | grep mysqld root 21753 1 0 May27 ? 00:00:00 /bin/sh /usr/bin/mysqld_safe mysql 21792 21753 0 May27 ? 00:00:00 /usr/sbin/mysqld --basedir=/usr --datadir=/var/lib/mysql --user=mysql --pid-file=/var/run/mysqld/mysqld.pid --skip-external-locking --port=3306 --socket=/var/run/mysqld/mysqld.sock root 21793 21753 0 May27 ? 00:00:00 logger -p daemon.err -t mysqld_safe -i -t mysqld root 21888 13676 0 11:23 pts/1 00:00:00 grep mysqld Netstat root@88:/var/log/mysql# netstat -lnp | grep mysql tcp 0 0 0.0.0.0:3306 0.0.0.0:* LISTEN 21792/mysqld unix 2 [ ACC ] STREAM LISTENING 1926205077 21792/mysqld /var/run/mysqld/mysqld.sock Toy Connection Class root@88:~# cat TestConnect/TestConnection.java import java.sql.Connection; import java.sql.DriverManager; import java.sql.SQLException; public class TestConnection { public static void main(String args[]) throws Exception { Connection con = null; try { Class.forName("com.mysql.jdbc.Driver").newInstance(); System.out.println("Got driver"); con = DriverManager.getConnection( "jdbc:mysql:///localhost:3306", "uname", "pass"); System.out.println("Got connection"); if(!con.isClosed()) System.out.println("Successfully connected to " + "MySQL server using TCP/IP..."); } finally { if(con != null) con.close(); } } } Toy Connection Class Output Note: This is the same error I get from Tomcat. root@88:~/TestConnect# java -cp mysql-connector-java-5.1.12-bin.jar:. TestConnection Got driver Exception in thread "main" com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure The last packet sent successfully to the server was 1 milliseconds ago. The driver has not received any packets from the server. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) at java.lang.reflect.Constructor.newInstance(Constructor.java:513) at com.mysql.jdbc.Util.handleNewInstance(Util.java:409) at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1122) at TestConnection.main(TestConnection.java:14) Caused by: com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure The last packet sent successfully to the server was 0 milliseconds ago. The driver has not received any packets from the server. at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39) at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27) at java.lang.reflect.Constructor.newInstance(Constructor.java:513) at com.mysql.jdbc.Util.handleNewInstance(Util.java:409) at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1122) at com.mysql.jdbc.MysqlIO.<init>(MysqlIO.java:344) at com.mysql.jdbc.ConnectionImpl.createNewIO(ConnectionImpl.java:2181) ... 12 more Caused by: java.net.ConnectException: Connection timed out at java.net.PlainSocketImpl.socketConnect(Native Method) ... 13 more Telnet Output root@88:~/TestConnect# telnet localhost 3306 Trying 127.0.0.1... telnet: Unable to connect to remote host: Connection timed out

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• WebSphere Application Server EJB Optimization

  - by Chris Aldrich

  We are working on developing a Java EE based application. Our application is Java 1.5 compatible and will be deployed to WAS ND 6.1.0.21 with EBJ 3.0 and Web Services feature packs. The configuration is currently one cell with two clusters. Each cluster will have two nodes. Our application, or our system, as I should rather say, comes in two or three parts. Part 1: An ear deployed to one cluster that contains 3rd party vendor code combined with customization code. Their code is EJB 2.0 compliant and has a lot of Remote Home interfaces. Part 2: An ear deployed to the same cluster as the first ear. This ear contains EBJ 3's that make calls into the EJB 2's supplied by the vendor and the custom code. These EJB 3's are used by the JSF UI also packaged with the EAR, and some of them are also exposed as web services (JAX-WS 2.0 with SOAP 1.2 compliance) for other clients. Part 3: There may be other services that do not depend on our vendor/custom code app. These services will be EJB 3.0's and web services that are deployed to the other cluster. Per a recommendation from some IBM staff on site here, communication between nodes in a cluster can be EJB RMI. But if we are going across clusters and/or other cells, then the communication should be web services. That said, some of us are wondering about performance and optimizing communication for speed of our applications that will use our web services and EJB's. Right now most EJB's are exposed as remote. (and our vendor set theirs up that way, rather than also exposing local home interfaces). We are wondering if WAS does any optimizations between apps in the same node/cluster node space. If two apps are installed in the same area and they call each other via remote home interface, is WAS smart enough to make it a local home interface call? Are their other optimization techniques? Should we consider them? Should we not? What are the costs/benefits? Here is the question from one of our team members as sent in their email: The question is: Supposing we develop our EJBs as remote EJBs, where our UI controller code is talking to our EXT java services via EJB3...what are our options for performance optimization when both the EJB server and client are running in the same container? As one point of reference, google has given me some oooooold websphere performance tuning documentation from 2000 that explains a tuning configuration you can set to enable Call By Reference for EJB communication when they're in the same application server JVM. It states the following: Because EJBs are inherently location independent, they use a remote programming model. Method parameters and return values are serialized over RMI-IIOP and returned by value. This is the intrinsic RMI "Call By Value" model. WebSphere provides the "No Local Copies" performance optimization for running EJBs and clients (typically servlets) in the same application server JVM. The "No Local Copies" option uses "Call By Reference" and does not create local proxies for called objects when both the client and the remote object are in the same process. Depending on your workload, this can result in a significant overhead savings. Configure "No Local Copies" by adding the following two command line parameters to the application server JVM: * -Djavax.rmi.CORBA.UtilClass=com.ibm.CORBA.iiop.Util * -Dcom.ibm.CORBA.iiop.noLocalCopies=true CAUTION: The "No Local Copies" configuration option improves performance by changing "Call By Value" to "Call By Reference" for clients and EJBs in the same JVM. One side effect of this is that the Java object derived (non-primitive) method parameters can actually be changed by the called enterprise bean. Consider Figure 16a: Also, we will also be using Process Server 6.2 and WESB 6.2 as well in the future. Any ideas? recommendations? Thanks

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• Why does File::Slurp return a scalar when it should return a list?

  - by BrianH

  I am new to the File::Slurp module, and on my first test with it, it was not giving the results I was expecting. It took me a while to figure it out, so now I am interested in why I was seeing this certain behavior. My call to File::Slurp looked like this: my @array = read_file( $file ) || die "Cannot read $file\n"; I included the "die" part because I am used to doing that when opening files. My @array would always end up with the entire contents of the file in the first element of the array. Finally I took out the "|| die" section, and it started working as I expected. Here is an example to illustrate: perl -de0 Loading DB routines from perl5db.pl version 1.22 Editor support available. Enter h or `h h' for help, or `man perldebug' for more help. main::(-e:1): 0 DB<1> use File::Slurp DB<2> $file = '/usr/java6_64/copyright' DB<3> x @array1 = read_file( $file ) 0 'Licensed material - Property of IBM.' 1 'IBM(R) SDK, Java(TM) Technology Edition, Version 6' 2 'IBM(R) Runtime Environment, Java(TM) Technology Edition, Version 6' 3 '' 4 'Copyright Sun Microsystems Inc, 1992, 2008. All rights reserved.' 5 'Copyright IBM Corporation, 1998, 2009. All rights reserved.' 6 '' 7 'The Apache Software License, Version 1.1 and Version 2.0' 8 'Copyright 1999-2007 The Apache Software Foundation. All rights reserved.' 9 '' 10 'Other copyright acknowledgements can be found in the Notices file.' 11 '' 12 'The Java technology is owned and exclusively licensed by Sun Microsystems Inc.' 13 'Java and all Java-based trademarks and logos are trademarks or registered' 14 'trademarks of Sun Microsystems Inc. in the United States and other countries.' 15 '' 16 'US Govt Users Restricted Rights - Use duplication or disclosure' 17 'restricted by GSA ADP Schedule Contract with IBM Corp.' DB<4> x @array2 = read_file( $file ) || die "Cannot read $file\n"; 0 'Licensed material - Property of IBM. IBM(R) SDK, Java(TM) Technology Edition, Version 6 IBM(R) Runtime Environment, Java(TM) Technology Edition, Version 6 Copyright Sun Microsystems Inc, 1992, 2008. All rights reserved. Copyright IBM Corporation, 1998, 2009. All rights reserved. The Apache Software License, Version 1.1 and Version 2.0 Copyright 1999-2007 The Apache Software Foundation. All rights reserved. Other copyright acknowledgements can be found in the Notices file. The Java technology is owned and exclusively licensed by Sun Microsystems Inc. Java and all Java-based trademarks and logos are trademarks or registered trademarks of Sun Microsystems Inc. in the United States and other countries. US Govt Users Restricted Rights - Use duplication or disclosure restricted by GSA ADP Schedule Contract with IBM Corp. ' Why does the || die make a difference? I have a feeling this might be more of a Perl precedence question instead of a File::Slurp question. I looked in the File::Slurp module and it looks like it is set to croak if there is a problem, so I guess the proper way to do it is to allow File::Slurp to croak for you. Now I'm just curious why I was seeing these differences.

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