At the company I work for, we have an intranet that provides employees with access to a wide variety of documents. These documents fall into several categories and subcategories, and each of these categories have their own web page. Below is one such page (each of the links shown will link to a similar view for that category):

We currently store each document as a file on the web server and hand-code links to these documents whenever we need to add a new document. This is tedious and error-prone, and it also means we lack any sort of security for accessing these documents. I began looking into document management systems (like KnowledgeTree and OpenKM), however, none of these systems seem to provide a categorized view like in the preview above.

My question is ... does anyone know of any Document Management System that allow for the type of flexibility we currently have with hand-coding links to our documents into various webpages (major and minor , while also providing security, ease of use, and (less important) version control? Or do you think I'd be better off developing such a system from scratch?