I'm looking for a way to keep a desktop and a laptop in sync. What I want to keep in sync are some folders, mainly ~/Documents, that are changed often when working on them.

If it matters I can connect to my desktop from anywhere via an URL but my laptop is harder to access since it might be behind NAT and such.

I have been looking at Ubuntu One but it seems to not go well with working on documents written in LaTeX. If I work on a .tex file in the Ubuntu One directory and compile it (with pdflatex) every now and then (as often as every 10 sec when working) it will create several new files including a pdf which are uploaded to Ubuntu One and this seems stupid since it will create continuous upload when working on .tex files. I also usually keep .tex documents version controlled by git and then every commit (which also can happen frequently) will cause upload (by changes in ./.git) so that it happens continuously when working. Another example is editing images that are saved often. What I think would be best is for sync to happen every tenth minute or at the end of every working session (but there might be some other way to handle this?).