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  • Double linking array in Python

    - by cdecker
    Since I'm pretty new this question'll certainly sound stupid but I have no idea about how to approach this. I'm trying take a list of nodes and for each of the nodes I want to create an array of predecessors and successors in the ordered array of all nodes. Currently my code looks like this: nodes = self.peers.keys() nodes.sort() peers = {} numPeers = len(nodes) for i in nodes: peers[i] = [self.coordinator] for i in range(0,len(nodes)): peers[nodes[i%numPeers]].append(nodes[(i+1)%numPeers]) peers[nodes[(i+1)%numPeers]].append(nodes[i%numPeers]) # peers[nodes[i%numPeers]].append(nodes[(i+4)%numPeers]) # peers[nodes[(i+4)%numPeers]].append(nodes[i%numPeers]) The last two lines should later be used to create a skip graph, but that's not really important. The problem is that it doesn't really work reliably, sometimes a predecessor or a successor is skipped, and instead the next one is used, and so forth. Is this correct at all or is there a better way to do this? Basically I need to get the array indices with certain offsets from each other. Any ideas?

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  • Confusion Matrix with number of classified/misclassified instances on it (Python/Matplotlib)

    - by Pinkie
    I am plotting a confusion matrix with matplotlib with the following code: from numpy import * import matplotlib.pyplot as plt from pylab import * conf_arr = [[33,2,0,0,0,0,0,0,0,1,3], [3,31,0,0,0,0,0,0,0,0,0], [0,4,41,0,0,0,0,0,0,0,1], [0,1,0,30,0,6,0,0,0,0,1], [0,0,0,0,38,10,0,0,0,0,0], [0,0,0,3,1,39,0,0,0,0,4], [0,2,2,0,4,1,31,0,0,0,2], [0,1,0,0,0,0,0,36,0,2,0], [0,0,0,0,0,0,1,5,37,5,1], [3,0,0,0,0,0,0,0,0,39,0], [0,0,0,0,0,0,0,0,0,0,38] ] norm_conf = [] for i in conf_arr: a = 0 tmp_arr = [] a = sum(i,0) for j in i: tmp_arr.append(float(j)/float(a)) norm_conf.append(tmp_arr) plt.clf() fig = plt.figure() ax = fig.add_subplot(111) res = ax.imshow(array(norm_conf), cmap=cm.jet, interpolation='nearest') cb = fig.colorbar(res) savefig("confmat.png", format="png") But I want to the confusion matrix to show the numbers on it like this graphic (the right one): http://i48.tinypic.com/2e30kup.jpg How can I plot the conf_arr on the graphic?

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  • Python: split a list based on a condition?

    - by Parand
    What's the best way, both aesthetically and from a performance perspective, to split a list of items into multiple lists based on a conditional? The equivalent of: good = [x for x in mylist if x in goodvals] bad = [x for x in mylist if x not in goodvals] is there a more elegant way to do this? Update: here's the actual use case, to better explain what I'm trying to do: # files looks like: [ ('file1.jpg', 33L, '.jpg'), ('file2.avi', 999L, '.avi'), ... ] IMAGE_TYPES = ('.jpg','.jpeg','.gif','.bmp','.png') images = [f for f in files if f[2].lower() in IMAGE_TYPES] anims = [f for f in files if f[2].lower() not in IMAGE_TYPES]

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  • Python and Gstreamer

    - by Seif Sallam
    hi, I'm creating a streaming application, using GStreamer with TCP pipeline, and i implemented start, pause, and stop. but the problem is, that i can't seek, i tried to change the playback value from the server side, then i tried on the client side, and Finally tried to change the value on both at the same time, but in all cases it doesn't work. and I even tried to pause the playback then continue but nothing happens. I'm having this problem with the seek and the volume. Any help please, I searched everywhere but i couldn't find anything that worked. this is the code that i use for seeking self.pipeline.seek_simple(gst.FORMAT_TIME, gst.SEEK_FLAG_FLUSH, time)

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  • Importing files in Python from __init__.py

    - by Federico Builes
    Suppose I have the following structure: app/ __init__.py foo/ a.py b.py c.py __init__.py a.py, b.py and c.py share some common imports (logging, os, re, etc). Is it possible to import these three or four common modules from the __init__.py file so I don't have to import them in every one of the files? Edit: My goal is to avoid having to import 5-6 modules in each file and it's not related to performance reasons.

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  • Python - Blackjack

    - by user335932
    def showCards(): #SUM sum = playerCards[0] + playerCards[1] #Print cards print "Player's Hand: " + str(playerCards) + " : " + "sum print "Dealer's Hand: " + str(compCards[0]) + " : " + "sum" compCards = [Deal(),Deal()] playerCards = [Deal(),Deal()] How can i add up the interger element of a list containing to values? under #SUM error is can combine lists like ints...

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  • Python halts while iteratively processing my 1GB csv file

    - by Dan
    I have two files: metadata.csv: contains an ID, followed by vendor name, a filename, etc hashes.csv: contains an ID, followed by a hash The ID is essentially a foreign key of sorts, relating file metadata to its hash. I wrote this script to quickly extract out all hashes associated with a particular vendor. It craps out before it finishes processing hashes.csv stored_ids = [] # this file is about 1 MB entries = csv.reader(open(options.entries, "rb")) for row in entries: # row[2] is the vendor if row[2] == options.vendor: # row[0] is the ID stored_ids.append(row[0]) # this file is 1 GB hashes = open(options.hashes, "rb") # I iteratively read the file here, # just in case the csv module doesn't do this. for line in hashes: # not sure if stored_ids contains strings or ints here... # this probably isn't the problem though if line.split(",")[0] in stored_ids: # if its one of the IDs we're looking for, print the file and hash to STDOUT print "%s,%s" % (line.split(",")[2], line.split(",")[4]) hashes.close() This script gets about 2000 entries through hashes.csv before it halts. What am I doing wrong? I thought I was processing it line by line. ps. the csv files are the popular HashKeeper format and the files I am parsing are the NSRL hash sets. http://www.nsrl.nist.gov/Downloads.htm#converter UPDATE: working solution below. Thanks everyone who commented! entries = csv.reader(open(options.entries, "rb")) stored_ids = dict((row[0],1) for row in entries if row[2] == options.vendor) hashes = csv.reader(open(options.hashes, "rb")) matches = dict((row[2], row[4]) for row in hashes if row[0] in stored_ids) for k, v in matches.iteritems(): print "%s,%s" % (k, v)

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  • Most efficient way to search the last x lines of a file in python

    - by Harley
    I have a file and I don't know how big it's going to be (it could be quite large, but the size will vary greatly). I want to search the last 10 lines or so to see if any of them match a string. I need to do this as quickly and efficiently as possible and was wondering if there's anything better than: s = "foo" last_bit = fileObj.readlines()[-10:] for line in last_bit: if line == s: print "FOUND"

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  • Python nested function scopes

    - by Thomas O
    I have code like this: def write_postcodes(self): """Write postcodes database. Write data to file pointer. Data is ordered. Initially index pages are written, grouping postcodes by the first three characters, allowing for faster searching.""" status("POSTCODE", "Preparing to sort...", 0, 1) # This function returns the key of x whilst updating the displayed # status of the sort. ctr = 0 def keyfunc(x): ctr += 1 status("POSTCODE", "Sorting postcodes", ctr, len(self.postcodes)) return x sort_res = self.postcodes[:] sort_res.sort(key=keyfunc) But ctr responds with a NameError: Traceback (most recent call last): File "PostcodeWriter.py", line 53, in <module> w.write_postcodes() File "PostcodeWriter.py", line 47, in write_postcodes sort_res.sort(key=keyfunc) File "PostcodeWriter.py", line 43, in keyfunc ctr += 1 UnboundLocalError: local variable 'ctr' referenced before assignment How can I fix this? I thought nester scopes would have allowed me to do this. I've tried with 'global', but it still doesn't work.

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  • python appengine form-posted utf8 file issue

    - by khany
    hi, i am trying to form-post a sql file that consists on many INSERTS, eg. INSERT INTO `TABLE` VALUES ('abcdé', 2759); then i use re.search to parse it and extract the fields to put into my own datastore. The problem is that, although the file contains accented characters (see the e is a é), once uploaded it loses it and either errors or stores a bytestring representation of it. Heres what i am currently using (and I have tried loads of alternatives): form = cgi.FieldStorage() uFile = form['sql'] uSql = uFile.file.read() lineX = uSql.split("\n") # to get each line and so on. has anyone got a robust way of making this work? remember i am on appengine so access to some libraries is restricted/forbidden

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  • Python Post Upload JPEG to Server?

    - by iJames
    It seems like this answer has been provided a bunch of times but in all of it, I'm still getting errors from the server and I'm sure it has to do with my code. I've tried HTTP, and HTTPConnection from httplib and both create quite different terminal outputs in terms of formatting/encoding so I'm not sure where the problem lies. Does anything stand out here? Or is there just a better way? Pieced together from an ancient article because I really needed to understand the basis of creating the post: http://code.activestate.com/recipes/146306-http-client-to-post-using-multipartform-data/ Note, the jpeg is supposed to be "unformatted". The pseudocode: boundary = "somerandomsetofchars" BOUNDARY = '--' + boundary CRLF = '\r\n' fields = [('aspecialkey','thevalueofthekey')] files = [('Image.Data','mypicture.jpg','/users/home/me/mypicture.jpg')] bodylines = [] for (key, value) in fields: bodylines.append(BOUNDARY) bodylines.append('Content-Disposition: form-data; name="%s"' % key) bodylines.append('') bodylines.append(value) for (key, filename, fileloc) in files: bodylines.append(BOUNDARY) bodylines.append('Content-Disposition: form-data; name="%s"; filename="%s"' % (key, filename)) bodylines.append('Content-Type: %s' % self.get_content_type(fileloc)) bodylines.append('') bodylines.append(open(fileloc,'r').read()) bodylines.append(BOUNDARY + '--') bodylines.append('') #print bodylines content_type = 'multipart/form-data; boundary=%s' % BOUNDARY body = CRLF.join(bodylines) #conn = httplib.HTTP("www.ahost.com") # In both this and below, the file part was garbling the rest of the body?!? conn = httplib.HTTPConnection("www.ahost.com") conn.putrequest('POST', "/myuploadlocation/uploadimage") headers = { 'content-length': str(len(body)), 'Content-Type' : content_type, 'User-Agent' : 'myagent' } for headerkey in headers: conn.putheader(headerkey, headers[headerkey]) conn.endheaders() conn.send(body) response = conn.getresponse() result = response.read() responseheaders = response.getheaders() It's interesting in that the real code I've implemented seems to work and is getting back valid responses, but the problem it it's telling me that it can't find the image data. Maybe this is particular to the server, but I'm just trying to rule out that I'm not doing some thing exceptionally stupid here. Or perhaps there's other methodologies for doing this more efficiently. I've not tried poster yet because I want to make sure I'm formatting the POST correctly first. I figure I can upgrade to poster after it's working yes?

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  • [Python] - Getting data from external program

    - by Kenny M.
    Hey, I need a method to get the data from an external editor. def _get_content(): from subprocess import call file = open(file, "w").write(some_name) call(editor + " " + file, shell=True) file.close() file = open(file) x = file.readlines() [snip] I personally think this is a very ugly way. You see I need to interact with an external editor and get the data. Do you know any better approaches/have better ideas?

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  • Python - Nested List to Tab Delimited File?

    - by Seafoid
    Hi, I have a nested list comprising ~30,000 sub-lists, each with three entries, e.g., nested_list = [['x', 'y', 'z'], ['a', 'b', 'c']]. I wish to create a function in order to output this data construct into a tab delimited format, e.g., x y z a b c Any help greatly appreciated! Thanks in advance, Seafoid.

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  • Python: date, time formatting

    - by TarGz
    I need to generate a local timestamp in a form of YYYYMMDDHHmmSSOHH'mm'. That OHH'mm' is one of +, -, Z and then there are hourhs and minutes followed by '. Please, how do I get such a timestamp, denoting both local time zone and possible daylight saving?

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  • Calling/selecting variables (float valued) with user input in Python

    - by Jonathan Straus
    I've been working on a computational physics project (plotting related rates of chemical reactants with respect to eachother to show oscillatory behavior) with a fair amount of success. However, one of my simulations involves more than two active oscillating agents (five, in fact) which would obviously be unsuitable for any single visual plot... My scheme was hence to have the user select which two reactants they wanted plotted on the x-axis and y-axis respectively. I tried (foolishly) to convert string input values into the respective variable names, but I guess I need a radically different approach if any exist? If it helps clarify any, here is part of my code: def coupledBrusselator(A, B, t_trial,display_x,display_y): t = 0 t_step = .01 X = 0 Y = 0 E = 0 U = 0 V = 0 dX = (A) - (B+1)*(X) + (X**2)*(Y) dY = (B)*(X) - (X**2)*(Y) dE = -(E)*(U) - (X) dU = (U**2)*(V) -(E+1)*(U) - (B)*(X) dV = (E)*(U) - (U**2)*(V) array_t = [0] array_X = [0] array_Y = [0] array_U = [0] array_V = [0] while t <= t_trial: X_1 = X + (dX)*(t_step/2) Y_1 = Y + (dY)*(t_step/2) E_1 = E + (dE)*(t_step/2) U_1 = U + (dU)*(t_step/2) V_1 = V + (dV)*(t_step/2) dX_1 = (A) - (B+1)*(X_1) + (X_1**2)*(Y_1) dY_1 = (B)*(X_1) - (X_1**2)*(Y_1) dE_1 = -(E_1)*(U_1) - (X_1) dU_1 = (U_1**2)*(V_1) -(E_1+1)*(U_1) - (B)*(X_1) dV_1 = (E_1)*(U_1) - (U_1**2)*(V_1) X_2 = X + (dX_1)*(t_step/2) Y_2 = Y + (dY_1)*(t_step/2) E_2 = E + (dE_1)*(t_step/2) U_2 = U + (dU_1)*(t_step/2) V_2 = V + (dV_1)*(t_step/2) dX_2 = (A) - (B+1)*(X_2) + (X_2**2)*(Y_2) dY_2 = (B)*(X_2) - (X_2**2)*(Y_2) dE_2 = -(E_2)*(U_2) - (X_2) dU_2 = (U_2**2)*(V_2) -(E_2+1)*(U_2) - (B)*(X_2) dV_2 = (E_2)*(U_2) - (U_2**2)*(V_2) X_3 = X + (dX_2)*(t_step) Y_3 = Y + (dY_2)*(t_step) E_3 = E + (dE_2)*(t_step) U_3 = U + (dU_2)*(t_step) V_3 = V + (dV_2)*(t_step) dX_3 = (A) - (B+1)*(X_3) + (X_3**2)*(Y_3) dY_3 = (B)*(X_3) - (X_3**2)*(Y_3) dE_3 = -(E_3)*(U_3) - (X_3) dU_3 = (U_3**2)*(V_3) -(E_3+1)*(U_3) - (B)*(X_3) dV_3 = (E_3)*(U_3) - (U_3**2)*(V_3) X = X + ((dX + 2*dX_1 + 2*dX_2 + dX_3)/6) * t_step Y = Y + ((dX + 2*dY_1 + 2*dY_2 + dY_3)/6) * t_step E = E + ((dE + 2*dE_1 + 2*dE_2 + dE_3)/6) * t_step U = U + ((dU + 2*dU_1 + 2*dY_2 + dE_3)/6) * t_step V = V + ((dV + 2*dV_1 + 2*dV_2 + dE_3)/6) * t_step dX = (A) - (B+1)*(X) + (X**2)*(Y) dY = (B)*(X) - (X**2)*(Y) t_step = .01 / (1 + dX**2 + dY**2) ** .5 t = t + t_step array_X.append(X) array_Y.append(Y) array_E.append(E) array_U.append(U) array_V.append(V) array_t.append(t) where previously display_x = raw_input("Choose catalyst you wish to analyze in the phase/field diagrams (X, Y, E, U, or V) ") display_y = raw_input("Choose one other catalyst from list you wish to include in phase/field diagrams ") coupledBrusselator(A, B, t_trial, display_x, display_y) Thanks!

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  • In Python, urllib2 giving error

    - by pythBegin
    I tried running this, >>> urllib2.urlopen('http://tycho.usno.navy.mil/cgi-bin/timer.pl') But it is giving error like this, can anyone tell me a solution ? Traceback (most recent call last): File "<pyshell#11>", line 1, in <module> urllib2.urlopen('http://tycho.usno.navy.mil/cgi-bin/timer.pl') File "C:\Python26\lib\urllib2.py", line 126, in urlopen return _opener.open(url, data, timeout) File "C:\Python26\lib\urllib2.py", line 391, in open response = self._open(req, data) File "C:\Python26\lib\urllib2.py", line 409, in _open '_open', req) File "C:\Python26\lib\urllib2.py", line 369, in _call_chain result = func(*args) File "C:\Python26\lib\urllib2.py", line 1161, in http_open return self.do_open(httplib.HTTPConnection, req) File "C:\Python26\lib\urllib2.py", line 1136, in do_open raise URLError(err) URLError: <urlopen error [Errno 11001] getaddrinfo failed>

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  • Python: Figure out local timezone

    - by Adam Matan
    I want to compare UTC timestamps from a log file with local timestamps. When creating the local datetime object, I use something like: >>> local_time=datetime.datetime(2010, 4, 27, 12, 0, 0, 0, tzinfo=pytz.timezone('Israel')) I want to find an automatic tool that would replace thetzinfo=pytz.timezone('Israel') with the current local time zone. Any ideas?

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  • Xml comparison in Python

    - by Gregg Lind
    Building on another SO question, how can one check whether two well-formed XML snippets are semantically equal. All I need is "equal" or not, since I'm using this for unit tests. In the system I want, these would be equal (note the order of 'start' and 'end'): <?xml version='1.0' encoding='utf-8' standalone='yes'?> <Stats start="1275955200" end="1276041599"> </Stats> # Reodered start and end <?xml version='1.0' encoding='utf-8' standalone='yes'?> <Stats end="1276041599" start="1275955200" > </Stats> I have lmxl and other tools at my disposal, and a simple function that only allows reordering of attributes would work fine as well!

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  • Multiple levels of 'collection.defaultdict' in Python

    - by Morlock
    Thanks to some great folks on SO, I discovered the possibilities offered by collections.defaultdict, notably in readability and speed. I have put them to use with success. Now I would like to implement three levels of dictionaries, the two top ones being defaultdict and the lowest one being int. I don't find the appropriate way to do this. Here is my attempt: from collections import defaultdict d = defaultdict(defaultdict) a = [("key1", {"a1":22, "a2":33}), ("key2", {"a1":32, "a2":55}), ("key3", {"a1":43, "a2":44})] for i in a: d[i[0]] = i[1] Now this works, but the following, which is the desired behavior, doesn't: d["key4"]["a1"] + 1 I suspect that I should have declared somewhere that the second level defaultdict is of type int, but I didn't find where or how to do so. The reason I am using defaultdict in the first place is to avoid having to initialize the dictionary for each new key. Any more elegant suggestion? Thanks pythoneers!

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