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  • Very simple python functions takes spends long time in function and not subfunctions

    - by John Salvatier
    I have spent many hours trying to figure what is going on here. The function 'grad_logp' in the code below is called many times in my program, and cProfile and runsnakerun the visualize the results reveals that the function grad_logp spends about .00004s 'locally' every call not in any functions it calls and the function 'n' spends about .00006s locally every call. Together these two times make up about 30% of program time that I care about. It doesn't seem like this is function overhead as other python functions spend far less time 'locally' and merging 'grad_logp' and 'n' does not make my program faster, but the operations that these two functions do seem rather trivial. Does anyone have any suggestions on what might be happening? Have I done something obviously inefficient? Am I misunderstanding how cProfile works? def grad_logp(self, variable, calculation_set ): p = params(self.p,self.parents) return self.n(variable, self.p) def n (self, variable, p ): gradient = self.gg(variable, p) return np.reshape(gradient, np.shape(variable.value)) def gg(self, variable, p): if variable is self: gradient = self._grad_logps['x']( x = self.value, **p) else: gradient = __builtin__.sum([self._pgradient(variable, parameter, value, p) for parameter, value in self.parents.iteritems()]) return gradient

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  • C: using a lot of structs can make a program slow?

    - by nunos
    I am coding a breakout clone. I had one version in which I only had one level deep of structures. This version runs at 70 fps. For more clarity in the code I decided the code should have more abstractions and created more structs. Most of the times I have two two three level deep of structures. This version runs at 30 fps. Since there are some other differences besides the structures, I ask you: Does using a lot of structs in C can slow down the code significantly? Thanks.

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  • Is is faster to filter and get data or filter then get data ?

    - by remi bourgarel
    Hi I have this kind of request : SELECT myTable.ID, myTable.Adress, -- 20 more columns of all kind of type FROM myTable WHERE EXISTS(SELECT * FROM myLink WHERE myLink.FID = myTable.ID and myLink.FID2 = 666) myLink has a lot of rows. Do you think it's faster to do like this : SELECT myLink.FID INTO @result FROM myLink WHERE myLink.FID2 = 666 UPDATE @result SET Adress = myTable.Adress, -- 20 more columns of all kind of type FROM myTable WHERE myTable.ID = @result.ID

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  • Slow loading of UITableView. How know why?

    - by mamcx
    I have a UITableView that show a long list of data. Use sections and follow the sugestion of http://stackoverflow.com/questions/695814/how-solve-slow-scrolling-in-uitableview . The flow is load a main UITableView & push a second selecting a row from there. However, with 3000 items take 11 seconds to show. I suspect first from the load of the records from sqlite (I preload the first 200). So I cut it to only 50. However, no matter if I preload only 1 or 500, the time is the same. The view is made from IB and all is opaque. I run out of ideas in how detect the problem. I run the Instruments tool but not know what to look. Also, when the user select a cell from the previous UITable, no visual feedback is show (ie: the cell not turn selected) for a while so he thinks he not select it and try several times. Is related to this problem. What to do? NOTE: The problem is only in the actual device: iPod Touch 2d generation Using fmdb as sqlite api Doing the caching in viewDidLoad Using NSDictionary for the caching Using a NSAutoreleasePool for the caching part. Only caching the row ID & mac 4 fields necesary to show the cell data UIView made with interface builder, SDK 2.2.1 Instruments say I use 2.5 MB in the device

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  • High CPU - What to do.

    - by Udi Kantzuker
    I have a high CPU problem with MYSQL using "top" ( linux ) shows cpu peaks of 90%. I was trying to find the source of the problem, turned on general log and slow query log, The slow query log did not find anything. The Db contains a few small tables and one large table that contains almost 100k rows, Database Engine is MyIsam. strange thing i have noticed that on the large table, select, insert are very fast but update takes 0.2 - 0.5 secs. already used optimize and repair and no improvement. the table is being updated frequently, could this be the source of the high CPU% ? What can i do to improve this?

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  • JavaScript: Is there a better way to retain your array but efficiently concat or replace items?

    - by Michael Mikowski
    I am looking for the best way to replace or add to elements of an array without deleting the original reference. Here is the set up: var a = [], b = [], c, i, obj; for ( i = 0; i < 100000; i++ ) { a[ i ] = i; b[ i ] = 10000 - i; } obj.data_list = a; Now we want to concatenate b INTO a without changing the reference to a, since it is used in obj.data_list. Here is one method: for ( i = 0; i < b.length; i++ ) { a.push( b[ i ] ); } This seems to be a somewhat terser and 8x (on V8) faster method: a.splice.apply( a, [ a.length, 0 ].concat( b ) ); I have found this useful when iterating over an "in-place" array and don't want to touch the elements as I go (a good practice). I start a new array (let's call it keep_list) with the initial arguments and then add the elements I wish to retain. Finally I use this apply method to quickly replace the truncated array: var keep_list = [ 0, 0 ]; for ( i = 0; i < a.length; i++ ){ if ( some_condition ){ keep_list.push( a[ i ] ); } // truncate array a.length = 0; // And replace contents a.splice.apply( a, keep_list ); There are a few problems with this solution: there is a max call stack size limit of around 50k on V8 I have not tested on other JS engines yet. This solution is a bit cryptic Has anyone found a better way?

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  • JAVA bytecode optimization

    - by Idob
    This is a basic question. I have code which shouldn't run on metadata beans. All metadata beans are located under metadata package. Now, I use reflection API to find out whether a class is located in the the metadata package. if (newEntity.getClass().getPackage().getName().contains("metadata")) I use this If in several places within this code. The question is: Should I do this once with: boolean isMetadata = false if (newEntity.getClass().getPackage().getName().contains("metadata")) { isMetadata = true; } C++ makes optimizations and knows that this code was already called and it won't call it again. Does JAVA makes optimization? I know reflection API is a beat heavy and I prefer not to lose expensive runtime.

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  • Long primitive or AtomicLong for a counter?

    - by Rich
    Hi I have a need for a counter of type long with the following requirements/facts: Incrementing the counter should take as little time as possible. The counter will only be written to by one thread. Reading from the counter will be done in another thread. The counter will be incremented regularly (as much as a few thousand times per second), but will only be read once every five seconds. Precise accuracy isn't essential, only a rough idea of the size of the counter is good enough. The counter is never cleared, decremented. Based upon these requirements, how would you choose to implement your counter? As a simple long, as a volatile long or using an AtomicLong? Why? At the moment I have a volatile long but was wondering whether another approach would be better. I am also incrementing my long by doing ++counter as opposed to counter++. Is this really any more efficient (as I have been led to believe elsewhere) because there is no assignment being done? Thanks in advance Rich

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  • Perl launched from Java takes forever

    - by Wade Williams
    I know this is an absolute shot in the dark, but we're absolutely perplexed. A perl (5.8.6) script run by Java (1.5) is taking more than an hour to complete. The same script, when run manually from the command line takes 12 minutes to complete. This is on a Linux host. Logging is the same in both cases and the script is run with the same parameters in both cases. The script does some complex stuff like Oracle DB access, some scp's, etc, but again, it does the exact same actions in both cases. We're stumped. Has anyone ever run into a similar situation? If not and if you were faced with the same situation, how would you consider debugging it?

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  • Running Boggle Solver takes over an hour to run. What is wrong with my code?

    - by user1872912
    So I am running a Boggle Solver in java on the NetBeans IDE. When I run it, i have to quit after 10 minutes or so because it will end up taking about 2 hour to run completely. Is there something wrong with my code or a way that will make is substantially faster? public void findWords(String word, int iLoc, int jLoc, ArrayList<JLabel> labelsUsed){ if(iLoc < 0 || iLoc >= 4 || jLoc < 0 || jLoc >= 4){ return; } if(labelsUsed.contains(jLabels[iLoc][jLoc])){ return; } word += jLabels[iLoc][jLoc].getText(); labelsUsed.add(jLabels[iLoc][jLoc]); if(word.length() >= 3 && wordsPossible.contains(word)){ wordsMade.add(word); } findWords(word, iLoc-1, jLoc, labelsUsed); findWords(word, iLoc+1, jLoc, labelsUsed); findWords(word, iLoc, jLoc-1, labelsUsed); findWords(word, iLoc, jLoc+1, labelsUsed); findWords(word, iLoc-1, jLoc+1, labelsUsed); findWords(word, iLoc-1, jLoc-1, labelsUsed); findWords(word, iLoc+1, jLoc-1, labelsUsed); findWords(word, iLoc+1, jLoc+1, labelsUsed); labelsUsed.remove(jLabels[iLoc][jLoc]); } here is where I call this method from: public void findWords(){ ArrayList <JLabel> labelsUsed = new ArrayList<JLabel>(); for(int i=0; i<jLabels.length; i++){ for(int j=0; j<jLabels[i].length; j++){ findWords(jLabels[i][j].getText(), i, j, labelsUsed); //System.out.println("Done"); } } } edit: BTW I am using a GUI and the letters on the board are displayed by using a JLabel.

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  • How to measure how long is a function running?

    - by rhose87
    I want to see how long a function is running. So I added a timer object on my form and I came out with this code: private int counter = 0; //inside button click I have: timer = new Timer(); timer.Tick += new EventHandler(timer_Tick); timer.Start(); Result result = new Result(); result = new GeneticAlgorithms().TabuSearch(parametersTabu, functia); timer.Stop(); and: private void timer_Tick(object sender, EventArgs e) { counter++; btnTabuSearch.Text = counter.ToString(); } But this is not counting anything. Any ideas?

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  • How to explain to a developer that adding extra if - else if conditions is not a good way to "improv

    - by Lilit
    Recently I've bumped into the following C++ code: if (a) { f(); } else if (b) { f(); } else if (c) { f(); } Where a, b and c are all different conditions, and they are not very short. I tried to change the code to: if (a || b || c) { f(); } But the author opposed saying that my change will decrease readability of the code. I had two arguments: 1) You should not increase readability by replacing one branching statement with three (though I really doubt that it's possible to make code more readable by using else if instead of ||). 2) It's not the fastest code, and no compiler will optimize this. But my arguments did not convince him. What would you tell a programmer writing such a code? Do you think complex condition is an excuse for using else if instead of OR?

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  • How to find root cause for "too many connections" error in MySQL/PHP

    - by Nir
    I'm running a web service which runs algorithms that serve millions of calls daily and run some background processing as well. Every now and than I see "Too many connections" error in attempts to connect to the MySQL box" for a few seconds. However this is not necessarily attributed to high traffic times or anything I can put my finger on. I want to find the bottleneck causing it. Other than in the specific times this happens the server isn't too loaded in terms of CPU and Memory, and has 2-3 connections (threads) open and everything works smoothly. (I use Zabbix for monitoring) Any creative ideas on how to trace it?

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  • finding long repeated substrings in a massive string

    - by Will
    I naively imagined that I could build a suffix trie where I keep a visit-count for each node, and then the deepest nodes with counts greater than one are the result set I'm looking for. I have a really really long string (hundreds of megabytes). I have about 1 GB of RAM. This is why building a suffix trie with counting data is too inefficient space-wise to work for me. To quote Wikipedia's Suffix tree: storing a string's suffix tree typically requires significantly more space than storing the string itself. The large amount of information in each edge and node makes the suffix tree very expensive, consuming about ten to twenty times the memory size of the source text in good implementations. The suffix array reduces this requirement to a factor of four, and researchers have continued to find smaller indexing structures. And that was wikipedia's comments on the tree, not trie. How can I find long repeated sequences in such a large amount of data, and in a reasonable amount of time (e.g. less than an hour on a modern desktop machine)? (Some wikipedia links to avoid people posting them as the 'answer': Algorithms on strings and especially Longest repeated substring problem ;-) )

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  • Intersection() and Except() is too slow with large collections of custom objects

    - by Theo
    I am importing data from another database. My process is importing data from a remote DB into a List<DataModel> named remoteData and also importing data from the local DB into a List<DataModel> named localData. I am then using LINQ to create a list of records that are different so that I can update the local DB to match the data pulled from remote DB. Like this: var outdatedData = this.localData.Intersect(this.remoteData, new OutdatedDataComparer()).ToList(); I am then using LINQ to create a list of records that no longer exist in remoteData, but do exist in localData, so that I delete them from local database. Like this: var oldData = this.localData.Except(this.remoteData, new MatchingDataComparer()).ToList(); I am then using LINQ to do the opposite of the above to add the new data to the local database. Like this: var newData = this.remoteData.Except(this.localData, new MatchingDataComparer()).ToList(); Each collection imports about 70k records, and each of the 3 LINQ operation take between 5 - 10 minutes to complete. How can I make this faster? Here is the object the collections are using: internal class DataModel { public string Key1{ get; set; } public string Key2{ get; set; } public string Value1{ get; set; } public string Value2{ get; set; } public byte? Value3{ get; set; } } The comparer used to check for outdated records: class OutdatedDataComparer : IEqualityComparer<DataModel> { public bool Equals(DataModel x, DataModel y) { var e = string.Equals(x.Key1, y.Key1) && string.Equals(x.Key2, y.Key2) && ( !string.Equals(x.Value1, y.Value1) || !string.Equals(x.Value2, y.Value2) || x.Value3 != y.Value3 ); return e; } public int GetHashCode(DataModel obj) { return 0; } } The comparer used to find old and new records: internal class MatchingDataComparer : IEqualityComparer<DataModel> { public bool Equals(DataModel x, DataModel y) { return string.Equals(x.Key1, y.Key1) && string.Equals(x.Key2, y.Key2); } public int GetHashCode(DataModel obj) { return 0; } }

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  • Database for Large number of 1kB data chunks (MySQL?)

    - by The Unknown
    I have a very large dataset, each item in the dataset being roughly 1kB in size. The data needs to be queried rapidly by many applications distributed over a network. The dataset has more than a million items (so 500 million+ 1kB data chunks). What would be the best method to storing this dataset (need to allow adding more items, and reading them rapidly, but never modifying already added data)? Would using a MySQL DB using the binary blob format be appropriate? Or should each of these be stored as files on a file system? edit: the number is 1 million items now, but needs to be able to scale to well over 500 million items easily.

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  • C++, using one byte to store two variables

    - by 2di
    Hi All I am working on representation of the chess board, and I am planning to store it in 32 bytes array, where each byte will be used to store two pieces. (That way only 4 bits are needed per piece) Doing it in that way, results in a overhead for accessing particular index of the board. Do you think that, this code can be optimised or completely different method of accessing indexes can be used? c++ char getPosition(unsigned char* c, int index){ //moving pointer c+=(index>>1); //odd number if (index & 1){ //taking right part return *c & 0xF; }else { //taking left part return *c>>4; } } void setValue(unsigned char* board, char value, int index){ //moving pointer board+=(index>>1); //odd number if (index & 1){ //replace right part //save left value only 4 bits *board = (*board & 0xF0) + value; }else { //replacing left part *board = (*board & 0xF) + (value<<4); } } int main() { char* c = (char*)malloc(32); for (int i = 0; i < 64 ; i++){ setValue((unsigned char*)c, i % 8,i); } for (int i = 0; i < 64 ; i++){ cout<<(int)getPosition((unsigned char*)c, i)<<" "; if (((i+1) % 8 == 0) && (i > 0)){ cout<<endl; } } return 0; } I am equally interested in your opinions regarding chess representations, and optimisation of the method above, as a stand alone problem. Thanks a lot

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  • Slow first page load on asp.net site

    - by Tabloo Quijico
    Hi, Every now and then (always after a long period of idle-time, e.g. overnight) when I access a site built using asp.net - it takes around 15 seconds to load the page (15 seconds before I see any progress whatsoever, then the page comes up fast). Further pages on that site, or refreshes, are quick as usual - they are also fast on other machines, only the first one seems to take the 'hit'. Page tracing never through anything up (whole cycle was a fraction of a second) So my question is where else should I be looking? Perhaps IIS? Or could it still be my asp.net app and I'm just looking in the wrong place (the trace) for clues? As I don't have much control over the IIS server, anything I can check through asp.net would be more helpful, before I go ask that particular admin. cheers :D

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  • oracle index for string column - does format of data affects quality of index?

    - by Jayan
    We have following type of "Unique ID" column for many tables in the database (Oracle). It is a string with following format <randomnumber>-<ascendingnumber>-<machinename> So we have some thing like this U1234-12345-NBBJD U1234-12346-NBBJD U1234-12347-NBBJD U1234-12348-NBBJD U1234-12349-NBBJD The UID value is unique, we have unique index on them. Does the following format is more efficient than above for index scans? NBBJD-U1234-12345 NBBJD-U1234-12346 NBBJD-U1234-12347 NBBJD-U1234-12348 NBBJD-U1234-12349

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  • ASP.NET problem - Firebug shows odd behaviour

    - by Brandi
    I have an ASP.NET application that does a large database read. It loads up a gridview inside an update panel. In VS2008, just running on my local machine, it runs fantastically. In production (identical code, just published and put on one of our network servers), it runs slow as dirt. Debug is set to false, so this is not the cause of the slow down. I'm not an experienced web developer, so besides that, feel free to suggest the obvious. I have been using Firebug to determine what's going on, and here is what that has turned up: On production, there are around 500 requests. The timeline bar is very short. The size column varies from run to run, but is always the same for the duration of the run. Locally, there are about 30 requests. The timeline bar takes up the entire space. Can anyone shed some light on why this is happening and what I can do to fix it? Also, I can't find much of anything on the web about this, so any references are helpful too.

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  • SQL Profiles showing high activity

    - by Wong Chi
    I am running my application locally -- ie. No external traffic and very low number of queries, fully under my control. I see tons of 'Audit Login' and 'Audit Logout' events. What are these and where are they actually stored (ie. Where is this audit log)? Are these a hint of a problem with connections, because I have only a simple connection string within my app and thought that connections would remain active throughout the operation of my app (ie. a single login at launch, and then a single logout when terminating).

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