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• How to diagnose failing 6Gbps SATA connection?

  - by whitequark

  I have a Samsung RC530 notebook and OCZ Vertex-3 6Gbps SATA SSD working in AHCI mode. # dmesg | grep DMI SAMSUNG ELECTRONICS CO., LTD. RC530/RC730/RC530/RC730, BIOS 03WD.M008.20110927.PSA 09/27/2011 # lspci -nn 00:1f.2 SATA controller [0106]: Intel Corporation 6 Series/C200 Series Chipset Family 6 port SATA AHCI Controller [8086:1c03] (rev 04) # sdparm -a /dev/sda /dev/sda: ATA OCZ-VERTEX3 2.15 At the boot, the following messages are present in dmesg (I am running Debian wheezy @ Linux 3.2.8): # dmesg | grep -iE '(ata|ahci)' [ 5.179783] ahci 0000:00:1f.2: version 3.0 [ 5.179802] ahci 0000:00:1f.2: PCI INT B -> GSI 19 (level, low) -> IRQ 19 [ 5.179864] ahci 0000:00:1f.2: irq 42 for MSI/MSI-X [ 5.195424] ahci 0000:00:1f.2: AHCI 0001.0300 32 slots 6 ports 6 Gbps 0x5 impl SATA mode [ 5.195429] ahci 0000:00:1f.2: flags: 64bit ncq sntf pm led clo pio slum part ems apst [ 5.195436] ahci 0000:00:1f.2: setting latency timer to 64 [ 5.204035] scsi0 : ahci [ 5.204301] scsi1 : ahci [ 5.204447] scsi2 : ahci [ 5.204592] scsi3 : ahci [ 5.204682] scsi4 : ahci [ 5.204799] scsi5 : ahci [ 5.204917] ata1: SATA max UDMA/133 abar m2048@0xf7c06000 port 0xf7c06100 irq 42 [ 5.204920] ata2: DUMMY [ 5.204923] ata3: SATA max UDMA/133 abar m2048@0xf7c06000 port 0xf7c06200 irq 42 [ 5.204924] ata4: DUMMY [ 5.204926] ata5: DUMMY [ 5.204927] ata6: DUMMY [ 5.523039] ata3: SATA link up 1.5 Gbps (SStatus 113 SControl 300) [ 5.525911] ata3.00: ATAPI: TSSTcorp CDDVDW SN-208BB, SC00, max UDMA/100 [ 5.531006] ata1: SATA link up 6.0 Gbps (SStatus 133 SControl 300) [ 5.533703] ata3.00: configured for UDMA/100 [ 5.542790] ata1.00: ATA-8: OCZ-VERTEX3, 2.15, max UDMA/133 [ 5.542800] ata1.00: 117231408 sectors, multi 16: LBA48 NCQ (depth 31/32), AA [ 5.552751] ata1.00: configured for UDMA/133 [ 5.553050] scsi 0:0:0:0: Direct-Access ATA OCZ-VERTEX3 2.15 PQ: 0 ANSI: 5 [ 5.559621] scsi 2:0:0:0: CD-ROM TSSTcorp CDDVDW SN-208BB SC00 PQ: 0 ANSI: 5 [ 5.564059] sd 0:0:0:0: [sda] 117231408 512-byte logical blocks: (60.0 GB/55.8 GiB) [ 5.564127] sd 0:0:0:0: [sda] Write Protect is off [ 5.564131] sd 0:0:0:0: [sda] Mode Sense: 00 3a 00 00 [ 5.564158] sd 0:0:0:0: [sda] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA [ 5.564582] sda: sda1 [ 5.564810] sd 0:0:0:0: [sda] Attached SCSI disk [ 5.572006] sr0: scsi3-mmc drive: 16x/24x writer dvd-ram cd/rw xa/form2 cdda tray [ 5.572010] cdrom: Uniform CD-ROM driver Revision: 3.20 [ 5.572189] sr 2:0:0:0: Attached scsi CD-ROM sr0 [ 6.717181] ata1.00: exception Emask 0x50 SAct 0x1 SErr 0x280900 action 0x6 frozen [ 6.717238] ata1.00: irq_stat 0x08000000, interface fatal error [ 6.717291] ata1: SError: { UnrecovData HostInt 10B8B BadCRC } [ 6.717342] ata1.00: failed command: READ FPDMA QUEUED [ 6.717395] ata1.00: cmd 60/50:00:20:39:58/00:00:00:00:00/40 tag 0 ncq 40960 in [ 6.717396] res 40/00:00:20:39:58/00:00:00:00:00/40 Emask 0x50 (ATA bus error) [ 6.717503] ata1.00: status: { DRDY } [ 6.717553] ata1: hard resetting link [ 7.033417] ata1: SATA link up 6.0 Gbps (SStatus 133 SControl 300) [ 7.055234] ata1.00: configured for UDMA/133 [ 7.055262] ata1: EH complete [ 7.147280] ata1.00: exception Emask 0x10 SAct 0xf8 SErr 0x280100 action 0x6 frozen [ 7.147340] ata1.00: irq_stat 0x08000000, interface fatal error [ 7.147393] ata1: SError: { UnrecovData 10B8B BadCRC } [ 7.147460] ata1.00: failed command: READ FPDMA QUEUED [ 7.147529] ata1.00: cmd 60/08:18:88:17:41/00:00:02:00:00/40 tag 3 ncq 4096 in [ 7.147531] res 40/00:38:50:99:64/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.147691] ata1.00: status: { DRDY } [ 7.147754] ata1.00: failed command: READ FPDMA QUEUED [ 7.147821] ata1.00: cmd 60/00:20:f8:42:4c/01:00:02:00:00/40 tag 4 ncq 131072 in [ 7.147822] res 40/00:38:50:99:64/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.147977] ata1.00: status: { DRDY } [ 7.148036] ata1.00: failed command: READ FPDMA QUEUED [ 7.148100] ata1.00: cmd 60/50:28:f8:43:4c/00:00:02:00:00/40 tag 5 ncq 40960 in [ 7.148101] res 40/00:38:50:99:64/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.148255] ata1.00: status: { DRDY } [ 7.148315] ata1.00: failed command: READ FPDMA QUEUED [ 7.148379] ata1.00: cmd 60/00:30:50:98:64/01:00:02:00:00/40 tag 6 ncq 131072 in [ 7.148380] res 40/00:38:50:99:64/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.148534] ata1.00: status: { DRDY } [ 7.148593] ata1.00: failed command: READ FPDMA QUEUED [ 7.148657] ata1.00: cmd 60/00:38:50:99:64/01:00:02:00:00/40 tag 7 ncq 131072 in [ 7.148658] res 40/00:38:50:99:64/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.148813] ata1.00: status: { DRDY } [ 7.148875] ata1: hard resetting link [ 7.464842] ata1: SATA link up 6.0 Gbps (SStatus 133 SControl 300) [ 7.486794] ata1.00: configured for UDMA/133 [ 7.486822] ata1: EH complete [ 7.546395] ata1.00: exception Emask 0x10 SAct 0x2f SErr 0x280100 action 0x6 frozen [ 7.546470] ata1.00: irq_stat 0x08000000, interface fatal error [ 7.546531] ata1: SError: { UnrecovData 10B8B BadCRC } [ 7.546588] ata1.00: failed command: READ FPDMA QUEUED [ 7.546648] ata1.00: cmd 60/00:00:e0:4b:61/01:00:02:00:00/40 tag 0 ncq 131072 in [ 7.546649] res 40/00:28:e0:4c:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.546794] ata1.00: status: { DRDY } [ 7.546847] ata1.00: failed command: READ FPDMA QUEUED [ 7.546906] ata1.00: cmd 60/00:08:90:2f:48/01:00:02:00:00/40 tag 1 ncq 131072 in [ 7.546907] res 40/00:28:e0:4c:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.547053] ata1.00: status: { DRDY } [ 7.547106] ata1.00: failed command: READ FPDMA QUEUED [ 7.547165] ata1.00: cmd 60/00:10:90:30:48/01:00:02:00:00/40 tag 2 ncq 131072 in [ 7.547166] res 40/00:28:e0:4c:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.547310] ata1.00: status: { DRDY } [ 7.547363] ata1.00: failed command: READ FPDMA QUEUED [ 7.547422] ata1.00: cmd 60/00:18:50:c7:64/01:00:02:00:00/40 tag 3 ncq 131072 in [ 7.547423] res 40/00:28:e0:4c:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.547568] ata1.00: status: { DRDY } [ 7.547621] ata1.00: failed command: READ FPDMA QUEUED [ 7.547681] ata1.00: cmd 60/00:28:e0:4c:61/01:00:02:00:00/40 tag 5 ncq 131072 in [ 7.547682] res 40/00:28:e0:4c:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.547825] ata1.00: status: { DRDY } [ 7.547882] ata1: hard resetting link [ 7.864408] ata1: SATA link up 6.0 Gbps (SStatus 133 SControl 300) [ 7.886351] ata1.00: configured for UDMA/133 [ 7.886375] ata1: EH complete [ 7.890012] ata1: limiting SATA link speed to 3.0 Gbps [ 7.890016] ata1.00: exception Emask 0x10 SAct 0x7 SErr 0x280100 action 0x6 frozen [ 7.890093] ata1.00: irq_stat 0x08000000, interface fatal error [ 7.890152] ata1: SError: { UnrecovData 10B8B BadCRC } [ 7.890210] ata1.00: failed command: READ FPDMA QUEUED [ 7.890272] ata1.00: cmd 60/00:00:90:33:48/01:00:02:00:00/40 tag 0 ncq 131072 in [ 7.890273] res 40/00:10:e0:4f:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.890418] ata1.00: status: { DRDY } [ 7.890472] ata1.00: failed command: READ FPDMA QUEUED [ 7.890530] ata1.00: cmd 60/00:08:90:34:48/01:00:02:00:00/40 tag 1 ncq 131072 in [ 7.890531] res 40/00:10:e0:4f:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.890672] ata1.00: status: { DRDY } [ 7.890724] ata1.00: failed command: READ FPDMA QUEUED [ 7.890781] ata1.00: cmd 60/78:10:e0:4f:61/00:00:02:00:00/40 tag 2 ncq 61440 in [ 7.890782] res 40/00:10:e0:4f:61/00:00:02:00:00/40 Emask 0x10 (ATA bus error) [ 7.890925] ata1.00: status: { DRDY } [ 7.890981] ata1: hard resetting link [ 8.208021] ata1: SATA link up 3.0 Gbps (SStatus 123 SControl 320) [ 8.230100] ata1.00: configured for UDMA/133 [ 8.230124] ata1: EH complete Looks like the SATA interface tries to use 6Gbps link, then fails miserably and Linux fallbacks to 3Gbps. This is somewhat fine for me, as the system boots successfully each time and works under high load (cd linux-3.2.8; make -j16). I've also ran memtest86+ and it did not find any errors. What concerns me more is that Grub sometimes takes a long time to load the images and/or fails to load itself completely. The error is consistent and is probablistic: that is, each time I boot I have a certain chance to fail. Actually, I have a slight suspiction on the cause of the failure. Look at the cabling: What kind of engineer does it this way? Nah. Even 1Gbps Ethernet hardly tolerates cables bent over a small angle, and there you have 6Gbps SATA. How cound I determine and fix the cause of errors and/or switch the link to 3Gbps mode permanently?

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• Directly call distutils' or setuptools' setup() function with command name/options, without parsing

  - by Ryan B. Lynch

  I'd like to call Python's distutils' or setuptools' setup() function in a slightly unconventional way, but I'm not sure whether distutils is meant for this kind of usage. As an example, let's say I currently have a 'setup.py' file, which looks like this (lifted verbatim from the distutils docs--the setuptools usage is almost identical): from distutils.core import setup setup(name='Distutils', version='1.0', description='Python Distribution Utilities', author='Greg Ward', author_email='[email protected]', url='http://www.python.org/sigs/distutils-sig/', packages=['distutils', 'distutils.command'], ) Normally, to build just the .spec file for an RPM of this module, I could run python setup.py bdist_rpm --spec-only, which parses the command line and calls the 'bdist_rpm' code to handle the RPM-specific stuff. The .spec file ends up in './dist'. How can I change my setup() invocation so that it runs the 'bdist_rpm' command with the '--spec-only' option, WITHOUT parsing command-line parameters? Can I pass the command name and options as parameters to setup()? Or can I manually construct a command line, and pass that as a parameter, instead? NOTE: I already know that I could call the script in a separate process, with an actual command line, using os.system() or the subprocess module or something similar. I'm trying to avoid using any kind of external command invocations. I'm looking specifically for a solution that runs setup() in the current interpreter. For background, I'm converting some release-management shell scripts into a single Python program. One of the tasks is running 'setup.py' to generate a .spec file for further pre-release testing. Running 'setup.py' as an external command, with its own command line options, seems like an awkward method, and it complicates the rest of the program. I feel like there may be a more Pythonic way.

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• Setup SVN/LAMP/Test Server/ on linux, where to start?

  - by John Isaacks

  I have a ubuntu machine I have setup. I installed apache2 and php5 on it. I can access the web server from other machines on the network via http://linux-server. I have subversion installed on it. I also have vsftpd installed on it so I can ftp to it from another computer on the network. Myself and other users currently use dreamweaver to checkin-checkout files directly from our live site to make changes. I want the connect to the linux server from pc. make the changes on the test server until ready and then pushed to the live site. I want to use subversion also into this workflow as well. but not sure what the best workflow is or how to set this up. I have no experience with linux, svn, or even using a test server, the checkin/out we are currently doing is the way I have always done it. I have hit many snags already just getting what I have setup because of my lack of knowledge in the area. Dreamweaver 5 has integration with subversion but I can't figure out how to get it to work. I want to setup and create the best workflow possible. I dont expect anyone to be able to give me an answer that will enlighten me enough to know everthing I need to know to do what I want to do (altough if possible that would be great) instead I am looking for maybe a knowledge path like answer. Like a general outline of what I need to do accompanied with links to learn how to do it. like read this book to learn linux, then read this article to learn svn, etc., then you should know what to do. I would be happy just getting it all setup, but I would like to know what I am actually doing while setting it up too.

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• one two-directed tcp socket OR two one-directed? (linux, high volume, low latency)

  - by osgx

  Hello I need to send (interchange) a high volume of data periodically with the lowest possible latency between 2 machines. The network is rather fast (e.g. 1Gbit or even 2G+). Os is linux. Is it be faster with using 1 tcp socket (for send and recv) or with using 2 uni-directed tcp sockets? The test for this task is very like NetPIPE network benchmark - measure latency and bandwidth for sizes from 2^1 up to 2^13 bytes, each size sent and received 3 times at least (in teal task the number of sends is greater. both processes will be sending and receiving, like ping-pong maybe). The benefit of 2 uni-directed connections come from linux: http://lxr.linux.no/linux+v2.6.18/net/ipv4/tcp_input.c#L3847 3847/* 3848 * TCP receive function for the ESTABLISHED state. 3849 * 3850 * It is split into a fast path and a slow path. The fast path is 3851 * disabled when: ... 3859 * - Data is sent in both directions. Fast path only supports pure senders 3860 * or pure receivers (this means either the sequence number or the ack 3861 * value must stay constant) ... 3863 * 3864 * When these conditions are not satisfied it drops into a standard 3865 * receive procedure patterned after RFC793 to handle all cases. 3866 * The first three cases are guaranteed by proper pred_flags setting, 3867 * the rest is checked inline. Fast processing is turned on in 3868 * tcp_data_queue when everything is OK. All other conditions for disabling fast path is false. And only not-unidirected socket stops kernel from fastpath in receive

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• one two-directed tcp socket of two one-directed? (linux, high volume, low latency)

  - by osgx

  Hello I need to send (interchange) a high volume of data periodically with the lowest possible latency between 2 machines. The network is rather fast (e.g. 1Gbit or even 2G+). Os is linux. Is it be faster with using 1 tcp socket (for send and recv) or with using 2 uni-directed tcp sockets? The test for this task is very like NetPIPE network benchmark - measure latency and bandwidth for sizes from 2^1 up to 2^13 bytes, each size sent and received 3 times at least (in teal task the number of sends is greater. both processes will be sending and receiving, like ping-pong maybe). The benefit of 2 uni-directed connections come from linux: http://lxr.linux.no/linux+v2.6.18/net/ipv4/tcp_input.c#L3847 3847/* 3848 * TCP receive function for the ESTABLISHED state. 3849 * 3850 * It is split into a fast path and a slow path. The fast path is 3851 * disabled when: ... 3859 * - Data is sent in both directions. Fast path only supports pure senders 3860 * or pure receivers (this means either the sequence number or the ack 3861 * value must stay constant) ... 3863 * 3864 * When these conditions are not satisfied it drops into a standard 3865 * receive procedure patterned after RFC793 to handle all cases. 3866 * The first three cases are guaranteed by proper pred_flags setting, 3867 * the rest is checked inline. Fast processing is turned on in 3868 * tcp_data_queue when everything is OK. All other conditions for disabling fast path is false. And only not-unidirected socket stops kernel from fastpath in receive

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• Best Java library(ies) for forgiving command interpreter

  - by vkraemer

  I am looking for a library or set of libraries that will help me write a forgiving command interpreter. A forgiving command interpreter would be a command interpreter which can deal with simple and even not so simple spelling and word order mistakes in the input. My goal is to have an interpreter which would take the input (a command) from a user and then: execute the command, if it is correct. apply corrections to the command, until a correct command is generated and then present that command to the user to confirm whether it is 'what the user meant'.

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• How to use the Visual Studio 2012 command line tool from system()

  - by Janice Regan

  I am attempting to compile and run one visual C++ program (project1) from another visual C++ program (project2) using msbuild and other commands available in the Visual studio command line tool but not in the windows command line tool. Everything works fine if I run it in the visual studio command line tool. For example I can build using msbuild and it works just as I want it to. When I try to run the same command in my C++ program using system(), the system call appears to use the Windows command line and therefore cannot find any of the commands (msbuild in this example). I am new to working with system() on windows (although I have extensive experience with it using Linux). Is there some way to make my C++ program use the Visual Studio command line environment when I call system (rather than Windows command line environment)? Using the command window manually is not an option. I need to compile and test a series of 200-300 different versions of the program in the project1. This is why I am writing program2

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• Mac OS X 10.6 executable not found without full path

  - by Danack

  I just installed Apache via MacPorts. It seems that my Mac was absolutely confused about which version of the Apache executables to run. After moving the Apache executables that ship with the Mac to a directory that is not listed in the PATH variable, trying to run the httpd built by MacPorts fails even though the correct directory (/opt/local/apache2/bin) is listed in the PATH variable. If I navigate to the directory /opt/local/apache2/bin and type the command httpd I still get the error message -bash: httpd: command not found If I type the command with the full path /opt/local/apache2/bin/httpd it works fine. I've run the command alias to see if something was clashing but the only thing listed is: alias wget='curl -O' How do I find what is intercepting the command and preventing the executable being found in the directory, even when I'm inside the same directory? By the way, the httpd file is executable: -rwxr-xr-x 1 root admin 442496 9 May 2012 httpd

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• How to filter and intercept Linux packets by using net_dev_add() API?

  - by Khajavi

  I'm writing ethernet network driver for linux. I want to receive packets, edit and resend them. I know how to edit the packet in packet_interceptor function, but how can I drop incoming packets in this function?? #include <linux/netdevice.h> #include <linux/skbuff.h> #include <linux/ip.h> #include <net/sock.h> struct packet_type my_proto; int packet_interceptor(struct sk_buff *skb, struct net_device *dev, struct packet_type *pt, struct net_device *orig_dev) { // I dont want certain packets go to upper in net_devices for further processing. // How can I drop sk_buff here?! return 0; } static int hello_init( void ) { printk(KERN_INFO "Hello, world!\n"); my_proto.type = htons(ETH_P_ALL); my_proto.dev = NULL; my_proto.func = packet_interceptor; dev_add_pack(&my_proto); return 0; } static void hello_exit(void) { dev_remove_pack(&my_proto); printk(KERN_INFO "Bye, world\n"); } module_init(hello_init); module_exit(hello_exit);

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• Linux fsck.ext3 says "Device or resource busy" although I did not mount the disk.

  - by matnagel

  I am running an ubuntu 8.04 server instance with a 8GB virtual disk on vmware 1.0.9. For disk maintenance I made a copy of the virtual disk (by making a copy of the 2 vmdk files of sda on the stopped vm on the host) and added it to the original vm. Now this vm has it's original virtual disk sda plus a 1:1 copy (sdd). There are 2 additional disk sdb and sdc which I ignore.) I would expect sdb not to be mounted when I start the vm. So I try tp do a ext2 fsck on sdd from the running vm, but it reports fsck reported that sdb was mounted. $ sudo fsck.ext3 -b 8193 /dev/sdd e2fsck 1.40.8 (13-Mar-2008) fsck.ext3: Device or resource busy while trying to open /dev/sdd Filesystem mounted or opened exclusively by another program? The "mount" command does not tell me sdd is mounted: $ sudo mount /dev/sda1 on / type ext3 (rw,relatime,errors=remount-ro) proc on /proc type proc (rw,noexec,nosuid,nodev) /sys on /sys type sysfs (rw,noexec,nosuid,nodev) varrun on /var/run type tmpfs (rw,noexec,nosuid,nodev,mode=0755) varlock on /var/lock type tmpfs (rw,noexec,nosuid,nodev,mode=1777) udev on /dev type tmpfs (rw,mode=0755) devshm on /dev/shm type tmpfs (rw) devpts on /dev/pts type devpts (rw,gid=5,mode=620) /dev/sdc1 on /mnt/r1 type ext3 (rw,relatime,errors=remount-ro) /dev/sdb1 on /mnt/k1 type ext3 (rw,relatime,errors=remount-ro) securityfs on /sys/kernel/security type securityfs (rw) When I ignore the warning and continue the fsck, it reported many errors. How do I get this under control? Is there a better way to figure out if sdd is mounted? Or how is it "busy? How to unmount it then? How to prevent ubuntu from automatically mounting. Or is there something else I am missing? Also from /var/log/syslog I cannot see it is mounted, this is the last part of the startup sequence: kernel: [ 14.229494] ACPI: Power Button (FF) [PWRF] kernel: [ 14.230326] ACPI: AC Adapter [ACAD] (on-line) kernel: [ 14.460136] input: PC Speaker as /devices/platform/pcspkr/input/input3 kernel: [ 14.639366] udev: renamed network interface eth0 to eth1 kernel: [ 14.670187] eth1: link up kernel: [ 16.329607] input: ImPS/2 Generic Wheel Mouse as /devices/platform/i8042/serio1/ kernel: [ 16.367540] parport_pc 00:08: reported by Plug and Play ACPI kernel: [ 16.367670] parport0: PC-style at 0x378, irq 7 [PCSPP,TRISTATE] kernel: [ 19.425637] NET: Registered protocol family 10 kernel: [ 19.437550] lo: Disabled Privacy Extensions kernel: [ 24.328857] loop: module loaded kernel: [ 24.449293] lp0: using parport0 (interrupt-driven). kernel: [ 26.075499] EXT3 FS on sda1, internal journal kernel: [ 28.380299] kjournald starting. Commit interval 5 seconds kernel: [ 28.381706] EXT3 FS on sdc1, internal journal kernel: [ 28.381747] EXT3-fs: mounted filesystem with ordered data mode. kernel: [ 28.444867] kjournald starting. Commit interval 5 seconds kernel: [ 28.445436] EXT3 FS on sdb1, internal journal kernel: [ 28.445444] EXT3-fs: mounted filesystem with ordered data mode. kernel: [ 31.309766] eth1: no IPv6 routers present kernel: [ 35.054268] ip_tables: (C) 2000-2006 Netfilter Core Team mysqld_safe[4367]: started mysqld[4370]: 100124 14:40:21 InnoDB: Started; log sequence number 0 10130914 mysqld[4370]: 100124 14:40:21 [Note] /usr/sbin/mysqld: ready for connections. mysqld[4370]: Version: '5.0.51a-3ubuntu5.4' socket: '/var/run/mysqld/mysqld.sock' port: 3 /etc/mysql/debian-start[4417]: Upgrading MySQL tables if necessary. /etc/mysql/debian-start[4422]: Looking for 'mysql' in: /usr/bin/mysql /etc/mysql/debian-start[4422]: Looking for 'mysqlcheck' in: /usr/bin/mysqlcheck /etc/mysql/debian-start[4422]: This installation of MySQL is already upgraded to 5.0.51a, u /etc/mysql/debian-start[4436]: Checking for insecure root accounts. /etc/mysql/debian-start[4444]: Checking for crashed MySQL tables.

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• linux raid 1: right after replacing and syncing one drive, the other disk fails - understanding what is going on with mdstat/mdadm

  - by devicerandom

  We have an old RAID 1 Linux server (Ubuntu Lucid 10.04), with four partitions. A few days ago /dev/sdb failed, and today we noticed /dev/sda had pre-failure ominous SMART signs (~4000 reallocated sector count). We replaced /dev/sdb this morning and rebuilt the RAID on the new drive, following this guide: http://www.howtoforge.com/replacing_hard_disks_in_a_raid1_array Everything went smooth until the very end. When it looked like it was finishing to synchronize the last partition, the other old one failed. At this point I am very unsure of the state of the system. Everything seems working and the files seem to be all accessible, just as if it synchronized everything, but I'm new to RAID and I'm worried about what is going on. The /proc/mdstat output is: Personalities : [raid1] [linear] [multipath] [raid0] [raid6] [raid5] [raid4] [raid10] md3 : active raid1 sdb4[2](S) sda4[0] 478713792 blocks [2/1] [U_] md2 : active raid1 sdb3[1] sda3[2](F) 244140992 blocks [2/1] [_U] md1 : active raid1 sdb2[1] sda2[2](F) 244140992 blocks [2/1] [_U] md0 : active raid1 sdb1[1] sda1[2](F) 9764800 blocks [2/1] [_U] unused devices: <none> The order of [_U] vs [U_]. Why aren't they consistent along all the array? Is the first U /dev/sda or /dev/sdb? (I tried looking on the web for this trivial information but I found no explicit indication) If I read correctly for md0, [_U] should be /dev/sda1 (down) and /dev/sdb1 (up). But if /dev/sda has failed, how can it be the opposite for md3 ? I understand /dev/sdb4 is now spare because probably it failed to synchronize it 100%, but why does it show /dev/sda4 as up? Shouldn't it be [__]? Or [_U] anyway? The /dev/sda drive now cannot even be accessed by SMART anymore apparently, so I wouldn't expect it to be up. What is wrong with my interpretation of the output? I attach also the outputs of mdadm --detail for the four partitions: /dev/md0: Version : 00.90 Creation Time : Fri Jan 21 18:43:07 2011 Raid Level : raid1 Array Size : 9764800 (9.31 GiB 10.00 GB) Used Dev Size : 9764800 (9.31 GiB 10.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 0 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:27:33 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : a3b4dbbd:859bf7f2:bde36644:fcef85e2 Events : 0.7704 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 17 1 active sync /dev/sdb1 2 8 1 - faulty spare /dev/sda1 /dev/md1: Version : 00.90 Creation Time : Fri Jan 21 18:43:15 2011 Raid Level : raid1 Array Size : 244140992 (232.83 GiB 250.00 GB) Used Dev Size : 244140992 (232.83 GiB 250.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 1 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:39:06 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : 8bcd5765:90dc93d5:cc70849c:224ced45 Events : 0.1508280 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 18 1 active sync /dev/sdb2 2 8 2 - faulty spare /dev/sda2 /dev/md2: Version : 00.90 Creation Time : Fri Jan 21 18:43:19 2011 Raid Level : raid1 Array Size : 244140992 (232.83 GiB 250.00 GB) Used Dev Size : 244140992 (232.83 GiB 250.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 2 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:46:44 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : 2885668b:881cafed:b8275ae8:16bc7171 Events : 0.2289636 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 19 1 active sync /dev/sdb3 2 8 3 - faulty spare /dev/sda3 /dev/md3: Version : 00.90 Creation Time : Fri Jan 21 18:43:22 2011 Raid Level : raid1 Array Size : 478713792 (456.54 GiB 490.20 GB) Used Dev Size : 478713792 (456.54 GiB 490.20 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 3 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:19:20 2013 State : clean, degraded Active Devices : 1 Working Devices : 2 Failed Devices : 0 Spare Devices : 1 Number Major Minor RaidDevice State 0 8 4 0 active sync /dev/sda4 1 0 0 1 removed 2 8 20 - spare /dev/sdb4 The active sync on /dev/sda4 baffles me. I am worried because if tomorrow morning I have to replace /dev/sda, I want to be sure what should I sync with what and what is going on. I am also quite baffled by the fact /dev/sda decided to fail exactly when the raid finished resyncing. I'd like to understand what is really happening. Thanks a lot for your patience and help. Massimo

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• Issues running commands

  - by Joel

  Every time I run a command I get this back. E: Could not open lock file /var/lib/apt/lists/lock - open (13: Permission denied) E: Unable to lock directory /var/lib/apt/lists/ E: Could not open lock file /var/lib/dpkg/lock - open (13: Permission denied) E: Unable to lock the administration directory (/var/lib/dpkg/), are you root? christopher@christopher:~$ This didn't start happening until I changed my device name.

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• How can I get add-apt-repository to work?

  - by Kristopher Arens

  Whenever I try to add a repository via the command line, I get the following error message: Traceback (most recent call last): File "/usr/bin/add-apt-repository", line 125, in ppa_info = get_ppa_info_from_lp(user, ppa_name) File "/usr/lib/python2.7/dist-packages/softwareproperties/ppa.py", line 80, in get_ppa_info_from_lp curl.perform() pycurl.error: (60, 'server certificate verification failed. CAfile: /etc/ssl/certs/ca-certificates.crt CRLfile: none') Is there a way to remedy this situation?

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• How do I detect if I'm in a 'full screen' bash shell or GUI terminal window?

  - by Nick T

  I have some code in my .bashrc that sets the terminal window title using the currently running command and it works great in Unity, where the terminal is in a window. However, when I'm logging in with the Ctrl + Alt + F1 terminal (whatever it's called), my prompt gets filled with garbage that is various escape sequences that set the (nonexistent) window title. How can I detect from within a bash script if I'm in one or the other?

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• How do I reinstate my admin user privileges to global read/write

  - by Matt

  I am running Ubuntu 12.04 LTS. I only have the one user which I created when I installed Ubuntu. Everything has been fine - love it - until I updated a software package recently from the command line using sudo (not gksudo). I was having a little bother which did not make sense to me and in a fluff changed my user read/write privileges through the GUI (not even clear how I got there!). After restart I was stuck in a login loop - using the right login password but kept getting looped back to the login and could only login as Guest. I could still login with my user/password via ctrl + alt + f1 Eventually I was able to login again at start up. Not sure exactly what it was I changed that worked but it was one of/or a combination of installing latest security updates, changing login manager from LightDM to DGM and back again, removing the ICE/Xauthority and chown user. Current dilemma is my primary admin user privileges were read only. In the command line ls -ls /home/user returned this value: drwx------ 48 username username 20480 I have since changed this using sudo chmod 0755 /home/username (from my limited understanding 755 should return my user privileges to their original read/write glory). ls -ld /home/user currently shows my user privileges as: drwxr-xr-x 48 username username 20480 I still seem to have only read access permissions. I've been through lots of threads (and the help file) that talk about creating new users/groups permissions etc. but specific info on returning my existing global/admin/primary users privileges to what they were when I first created that user - baffling me. I feel this is something really simple I'm just not getting it. Please help! sudo mount /dev/sda1 on / type ext4 (rw,errors=remount-ro) proc on /proc type proc (rw,noexec,nosuid,nodev) sysfs on /proc type sysfs (rw,noexec,nosuid,nodev) none on /sys/fs/fuse/connections type fusect1 (rw) none on /sys/kernel/debug type debugfs (rw) none on /sys/kernel/security type securityfs (rw) udev on /dev type devtmpfs (rw,mode=07pe tmpfs55) devpts on /dev/pts type devpts (rw,noexec,nosuid,gid=5,mode=0620) tmpfs on /run type tmpfs (rw,noexec,nosuid,size=10%,mode=0755) none on /run/lock type tmpfs (rw, ,nosuid,nodev,size=5242880 none on /run/shm type tmpfs (rw,nosuid,nodev) gvfs-fuse-daemon on /home/meng/.gvfs type fuse.gvfs-fuse-daemon (rw,nosuid,nodev,user=meng) none on /tmp/guest-1R2Fi5 type tmpsf (rw,mode=700)

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• What causes Nautilus to restart whenever I kill it?

  - by fred.bear

  In htop, I kill Nautilus, and within one second, it's back, with a new PID! The restarted Nautilus shows in the Processes list, but has no GUI until I manually launch Nautilus... I've heard mention of Nautilus works in lockstep with the desktop... maybe that is the reason(?). Is there some sort of "watchdog" program keeping an eye on some distro-critical programs? Monitoring Nautilus doesn't seem like a Linux kernel issue, so I just wonder what is happening here?

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• How to emulate Fn (function key) keypress in xte

  - by komputes

  xte is part of the xautomation package. After hours of man page reading and looking for documentation or working examples, I still cannot get xte to emulate a Fn-F7 keypress. xte 'keydown Meta_L' 'key F7' 'keyup Meta_L' I've tried Meta_L, Meta_R, Multi_key, key F7, keydown F7 then keyup F7. No combination seems to work. Any idea how I can emulate a combination key press with a Fn key from a command/script?

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• Optimize video filesize without quality loss

  - by user12015

  Is there a simple way (on the command line - I want to write a script which compresses all videos in a folder) to reduce the filesize of a video (almost) without quality loss? Is there a method which works equally well for different video format (mp4, flv, m4v, mpg, mov, avi)? I should mention that most of the videos I would like to compress are downloaded web-videos (mp4, flv), so it's not clear if there is much room for further compression.

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• Grep through subdirectories

  - by Kathryn

  Add a string to a text file from terminal I've been looking at this thread. The solution (number 2, with ls | grep) works perfectly for files called .txt in the current directory. How about if I wanted to search through a directory and the subdirectories therein? For example, I have to search through a directory that has many subdirectories, and they have many subdirectories etc. I'm new to Linux sorry, so I'm not sure if this is the right place

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• Reboot without sudoer privileges?

  - by Lincoln

  Hi together, I've been trying to get my ubuntu restart without having to edit the sudoers. This has been possible before (in lucid I think) using a dbus command: dbus-send –system –print-reply –dest=org.freedesktop.ConsoleKit /org/freedesktop/ConsoleKit/Manager org.freedesktop.ConsoleKit.Manager.Restart But this gives me an error. Looks like things have changed. In KDE (which I don't use) one has something similar (see this answer) Could anyone show me an alternative way to make my machine reboot from a script (without adjusting rights)

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• No se que hay que hacer :$ URGENTE!

  - by Meri

  Pues yo llevo muy poco tiempo con ununtu y nose que hay que hacer no se me inicia .. es decir me sale el menu grub ese y le doy al primero iniciar con linux pero me sale una rayita blanca parpadeando y asi horas y no se enciende y tengo que apagarle forzandolo de golpe y lo vuelvo a encender y le doy modo recuperacion y sale muchas cosas y al final not avaliable algo asi y se queda asi rato necesito ayuda.Intente muchas cosas de internet pero ninguna funciono si os sirve de informacion tengo un Acer Aspire 5630 tiene intel.

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• List samba shares and current users

  - by komputes

  Looking for a simple way to do this from the command line. List samba shares and the users who can access each of them. List samba shares and the users currently connected to them. List samba shares and every connection (log, including user) that has been established to each of them. Any ideas? Anything you use that's currently available that will give me the bits I need to put this together? Cheers!

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• How do I rip a dvd including menus and extras to a menu driven divx file (or any lossy format that supports menus)?

  - by John Baber

  I am asking exactly this question for the same reason, but would like to archive dvds as small, low quality video, while preserving the menu choosing experience. I would like to rip my dvds to something that has the same menus but whose video is in a much more compressed format. I do not want to copy a dvd to an .iso image. How can this be done in the most automatic (hopefully CLI) way possible? Any format is fine so long as playback on linux is possible.

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• How to uninstall Ubuntu Software Center in 11.10?

  - by sainath

  I am trying to uninstall software center for ubuntu oneric using the command sudo apt-get remove software center and get this as result Reading package lists... Done Building dependency tree Reading state information... Done E: Unable to locate package software E: Unable to locate package center I did it once and got it fixed but now it does't work. I have an issue with the software center it keeps on repeatedly giving message saying send error.

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• How can I use my keyboard as a mouse?

  - by Michael Durrant

  I'm using my keyboard more and more these days for basic command line stuff, vim editing, alt-tab window switching and the like. Q) How can I use my number pad keys to move the cursor around on the screen without using the mouse? I looked to try and install btnx as mentioned by others but it doesn't seem to exist anymore as an available package I also tried shift-numlock as mentioned by another but that didn't work either (just turns numlock on/off).

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