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  • How can I make the output from tapply() into a data.frame

    - by James Thompson
    I have a data.frame in R that looks like this: score rms template aln_id description 1 -261.410 4.951 2f22A.pdb 2F22A_1 S_00001_0000002_0 2 -231.987 21.813 1wb9A.pdb 1WB9A_4 S_00002_0000002_0 3 -263.722 4.903 2f22A.pdb 2F22A_3 S_00003_0000002_0 4 -269.681 17.732 1wbbA.pdb 1WBBA_6 S_00004_0000002_0 5 -258.621 19.098 1rxqA.pdb 1RXQA_3 S_00005_0000002_0 6 -246.805 6.889 1rxqA.pdb 1RXQA_15 S_00006_0000002_0 7 -281.300 16.262 1wbdA.pdb 1WBDA_11 S_00007_0000002_0 8 -271.666 4.193 2f22A.pdb 2F22A_2 S_00008_0000002_0 9 -277.964 13.066 1wb9A.pdb 1WB9A_5 S_00009_0000002_0 10 -261.024 17.153 1yy9A.pdb 1YY9A_2 S_00001_0000003_0 I can calculate summary statistics on the data.frame like this: > tapply( d$score, d$template, mean ) 1rxqA.pdb 1wb9A.pdb 1wbbA.pdb 1wbdA.pdb 1yy9A.pdb 2f22A.pdb -252.7130 -254.9755 -269.6810 -281.3000 -261.0240 -265.5993 Is there an easy way that I coerce this output back into a data.frame? I'd like for it to have these two columns: d$template mean I love tapply, but right now I'm cutting and pasting the results from tapply into a text file and hacking it up a bit to get the summary statistics that I want with appropriate names. This feels very wrong, and I'd like to do something better!

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  • Matlab Question - Principal Component Analysis

    - by Jack
    I have a set of 100 observations where each observation has 45 characteristics. And each one of those observations have a label attached which I want to predict based on those 45 characteristics. So it's an input matrix with the dimension 45 x 100 and a target matrix with the dimension 1 x 100. The thing is that I want to know how many of those 45 characteristics are relevant in my set of data, basically the principal component analysis, and I understand that I can do this with Matlab function processpca. Could you please tell me how can I do this? Suppose that the input matrix is x with 45 rows and 100 columns and y is a vector with 100 elements.

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  • Edit and create nodes in a view?

    - by tputkonen
    We are storing people's class attendance information to Drupal. We would like to show this in a grid/chart, where the first column of each row shows person's name, and rest of the columns (ca. 20) either a checkbox or "X" if the user attended a class, or otherwise an non-checked box or empty column: (dates here) Jack X XXX X X Jill XX XXX XX It should also be possible to edit the attendance information on the grid. Each attendance information is a node of its own. This functionality can probably mostly be achieved using views and editablefields, but there is one problem: if a person has not attended a specific class he/she will not have at all an attendace node for that day. What would be the easiest way to create an attendace node in those cases, so that it would be possible for the end user to edit the grid by just clicking on the checkbox or typing an 'X'?

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  • Python CSV file processing

    - by kingwarchief
    I just got introduced to python, the first language I get to learn, and I have this question below: I have an excel based CSV file with two columns (or rows, Pythonically) that I am working on. What I need to do is to perform some operations so that I can compare the two data entries in each 'row'. To be more precise, one column has constant numbers all the way down, whereas the other column varies. So I need to count the number of times the varying column data entry values crosses the constant value on the other column. For example: Varying Column; Constant Column 24 25 26 25 crosses 27 25 26 25 25.5 25 23 25 crossed 26 25 crossed So in this case the number of times there is a cross

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  • Contrary to Python 3.1 Docs, hash(obj) != id(obj). So which is correct?

    - by Don O'Donnell
    The following is from the Python v3.1.2 documentation: From The Python Language Reference Section 3.3.1 Basic Customization: object.__hash__(self) ... User-defined classes have __eq__() and __hash__() methods by default; with them, all objects compare unequal (except with themselves) and x.__hash__() returns id(x). From The Glossary: hashable ... Objects which are instances of user-defined classes are hashable by default; they all compare unequal, and their hash value is their id(). This is true up through version 2.6.5: Python 2.6.5 (r265:79096, Mar 19 2010 21:48:26) ... ... >>> class C(object): pass ... >>> c = C() >>> id(c) 11335856 >>> hash(c) 11335856 But in version 3.1.2: Python 3.1.2 (r312:79149, Mar 21 2010, 00:41:52) ... ... >>> class C: pass ... >>> c = C() >>> id(c) 11893680 >>> hash(c) 743355 So which is it? Should I report a documentation bug or a program bug? And if it's a documentation bug, and the default hash() value for a user class instance is no longer the same as the id() value, then it would be interesting to know what it is or how it is calculated, and why it was changed in version 3.

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  • Grid view update event form javascript

    - by pranay
    I have grid control select <%--Select--% </ItemTemplate> </asp:TemplateField> </columns> <pagersettings mode="NumericFirstLast" position="Top" pagebuttoncount="5" /> <pagerstyle backcolor="Pink" /> </cc:AppEngineGridView> my code on row create protected override void OnRowCreated(GridViewRowEventArgs e) { try { if (e.Row.RowType == DataControlRowType.DataRow) { e.Row.ID = this.ID + "_" + e.Row.RowIndex; e.Row.Attributes.Add("onmouseover", "this.style.cursor='pointer';this.style.font.weight='bolder';"); e.Row.Attributes.Add("onclick", "DoNav('" + ((LinkButton)e.Row.FindControl("lbtn1")).ClientID + "');"); } } protected void grduser_RowUpdating(object sender, GridViewUpdateEventArgs e) { grdview_RowClickCommand(sender, e); } Javascript : function DoNav(id) { $("#"+id).click(); } Now my question is when i click on the row it do post back but it didnt call rowupdate event How can do this i.e using javascript to call row update command of the grid.

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  • python how to put data on y-axis when plotting histogram

    - by user3041107
    I don't quite understand how to control y - axis when using plt.hist plot in python. I read my .txt data file - it contains 10 columns with various data. If I want to plot distribution of strain on x axis I take column n.5. But what kind of value appears on y axis ??? Don't understand that. here is the code: import numpy import matplotlib.pyplot as plt from pylab import * from scipy.stats import norm import sys strain = [] infile = sys.argv[1] for line in infile: ret = numpy.loadtxt(infile) strain += list(ret[:,5]) fig = plt.figure() plt.hist(strain, bins = 20) plt.show() Thanks for help!

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  • SQL script to show addition to tables

    - by andreas
    Hey all I have a 2 MS SQL 2005 databases,a TEST and DEV database. Now our developer added some extra columns,tables etc in the DEV database.This created differences in the TEST database.is there a script i can write tha can tell me what the changes where in the DEV database between certain dates...i found a couple of tools but they are quite basic and dont really generate change scripts etc. Also tried the change script function in management studio but it seems to be working when the change is first made and not later. Appreciate your thoughts. A.

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  • How do I determine whether calculation was completed, or detect interrupted calculation?

    - by BenTobin
    I have a rather large workbook that takes a really long time to calculate. It used to be quite a challenge to get it to calculate all the way, since Excel is so eager to silently abort calculation if you so much as look at it. To help alleviate the problem, I created some VBA code to initiate the the calculation, which is initiated by a form, and the result is that it is not quite as easy to interrupt the calculation process, but it is still possible. (I can easily do this by clicking the close X on the form, but I imagine there are other ways) Rather than taking more steps to try and make it harder to interrupt calculation, I'd like to have the code detect whether calculation is complete, so it can notify the user rather than just blindly forging on into the rest of the steps in my code. So far, I can't find any way to do that. I've seen references to Application.CalculationState, but the value is xlDone after I interrupt calculation, even if I interrupt the calculation after a few seconds (it normally takes around an hour). I can't think of a way to do this by checking the value of cells, since I don't know which one is calculated last. I see that there is a way to mark cells as "dirty" but I haven't been able to find a way to check the dirtiness of a cell. And I don't know if that's even the right path to take, since I'd likely have to check every cell in every sheet. The act of interrupting calculation does not raise an error, so my ON ERROR doesn't get triggered. Is there anything I'm missing? Any ideas? Any ideas?

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  • Multiple sections on landing page only

    - by RDRAO
    Hi every one, I am very much new to Drupal but am loving it to start with. I got struck at a point with respect to theaming. I have a region called 'footer-teaser' just above footer. Its width is 800px. its been split into 3 equal size columns. Each column has the following. Image of size 120x120 Some teaser text Link to 'read more' The design requirement is all the above should be editable by the admin from the admin interface. If its static i would have hardcoded this but since the requirement is dynamic, i am not aware of how to achieve this. I have customised page.tpl for other sections of the page except this. I am sure someone else would have faced this issue before and was wondering if anyone can direct me in the right direction? Even better if an example is provided. Cheers RD

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  • Convert Date with characters to mm/dd/yyyy

    - by peter
    I have a columns called Submit_Date in table Tickets and the datatype of it is Varchar(200) and I am trying to convert it to MM/DD/YYYY format and when i do that i get the following error: Msg 242, Level 16, State 3, Line 1 The conversion of a varchar data type to a datetime data type resulted in an out-of-range value. Sample Data of the table is: Submit_Date 27-09-2013 16:15:00 CST 30-09-2013 16:30:24 CST 27-09-2013 10:03:46 CST 30-09-2013 14:35:55 CST 25-09-2013 16:28:48 CST 24-09-2013 09:29:45 CST I tried doing the following: Select Convert(datetime,Submit_date,101) from dbo.Tickets Let me know where I am doing wrong.

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  • Is there any function in Matlab for changing the form of matrix?

    - by niko
    Hi, I have to get the unknown matrix by changing the form of known matrix considering the following rules: H = [-P'|I] G = [I|P] where H is known matrix G is unknown matrix which has to be calculated I is identity matrix So for example if we had a matrix H = [1 1 1 1 0 0; 0 0 1 1 0 1; 1 0 0 1 1 0] its form has to be changed to H = [1 1 1 1 0 0; 0 1 1 0 1 0; 1 1 0 0 0 1] so -P' = [1 1 1; 0 1 0; 1 1 0] and in case of binary matrices -P = P therefore G = [1 0 0 1 1 1; 0 1 0 0 1 0; 0 0 1 1 1 0] I know how to solve it on the paper by performing basic row operations but don't know how if there is any function already written in Matlab to calculate G from H or H from G by considering the above rules. I would be very thankful if anyone of you could suggest any method for solving the given problem. Thank you.

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  • Database design: objects with different attributes

    - by Álvaro G. Vicario
    I'm designing a product database where products can have very different attributes depending on their type, but attributes are fixed for each type and types are not manageable at all. E.g.: magazine: title, issue_number, pages, copies, close_date, release_date web_site: name, bandwidth, hits, date_from, date_to I want to use InnoDB and enforce database integrity as much as the engine allows. What's the recommended way to handle this? I hate those designs where tables have 100 columns and most of the values are NULL so I thought about something like this: product_type ============ product_type_id INT product_type_name VARCHAR product ======= product_id INT product_name VARCHAR product_type_id INT -> Foreign key to product_type.product_type_id valid_since DATETIME valid_to DATETIME magazine ======== magazine_id INT title VARCHAR product_id INT -> Foreign key to product.product_id issue_number INT pages INT copies INT close_date DATETIME release_date DATETIME web_site ======== web_site_id INT name VARCHAR product_id INT -> Foreign key to product.product_id bandwidth INT hits INT date_from DATETIME date_to DATETIME This can handle cascaded product deletion but... Well, I'm not fully convinced...

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  • Is there any problem when I mix JSF with plain HTML?

    - by RhigoHR
    I have the next code: <li> <h:form rendered="#{!loginController.session}"> <h3>Inicio de Sesi&oacute;n</h3> <h:panelGrid columns="2" cellpadding="7"> <h:outputText value="Usuario: " /> <h:inputText id="loginname" value="#{loginController.loginname}" maxlength="16" /> <h:outputText value="Contrase&ntilde;a: " /> <h:inputSecret id="password" value="#{loginController.password}" maxlength="16"/> <h:outputText value="" /> <h:commandButton value="Iniciar Sesi&oacute;n" action="#{loginController.CheckValidUser}" /> </h:panelGrid> </h:form> </li> But when run that the page doesn't render the form, anybody can tell me why?

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  • How can I use different metadata for a Dynamic Data form view and the list view?

    - by ProfK
    We often need a summarised list view with more detailed form view. So far, the only two way I can think of doing this are using a 'custom' list or form view than uses a sumplimentary 'remove' or 'add' list of fields anb generalise this over all entity sets, or create a custom metadata provider that infers somehow which columns to supply. Are there any other ways of distinguishing these two views? PS, I wrote a fun little general details page, that handles insert, edit, and view, all on one page template. Maybe I could somehow use that? It's here.

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  • How to use Datasource to fetch some value that has been filled in it.

    - by Shantanu Gupta
    I am trying to fetch a column value from a datasource when some value is selected from a dropdownlist on its change event. <asp:DropDownList ID="ddlCityName" runat="server" DataSourceID="dsCity" DataTextField="CityName" DataValueField="CityID" AutoPostBack="True" OnTextChanged="CityName_OnTextChanged"> </asp:DropDownList> <asp:SqlDataSource ID="dsCity" runat="server" ConnectionString="<%$ ConnectionStrings:GmapConnectionString %>" SelectCommand="SELECT * FROM [vcity]" ></asp:SqlDataSource> Here I want to fetch any other column's value that is not binded to a ddlCityName from sqldatasource. I have four columns in datasource i.e. name, id, address, phno. I want to fetch an address of a person who selects some value from ddl.

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  • Matlab time stamps reading

    - by Paul
    Any easy way to read all the columns in Matlab? my format is date time y1 y2 y3 y4 ......................... 4/27/2010 00:3:09 34 45 45 56 ................ so on currently i am reading these with the code [c,pathc]=uigetfile({'*.txt'},'Select the data','C:\Data'); file=[pathc c]; data= dlmread(file, ',', 1,3); so needless to say i am skipping the time stamps. Was wondering if there is aeasy way to read the time stamps and plot my other colums agianst the time in hours. my files are 43200 X 30 and some are 86400 X 90 Related question : is the format same for .csv and .xls files , i mean except ofcourse xlsread

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  • R get rid of rows with duplicate attribute

    - by CatholicEvangelist
    hi there I have a big dataframe with columns such as: ID, time, OS, IP Each row of that dataframe corresponds to one entry. Within that dataframe for some IDs serveral entries (rows) exist. I would like to get rid of those multiple rows (obviously the other attributes will differ for the same ID). Or put different: I only want one single entry (row) for each ID. Could anyone be so kind and help me out on this one? When I use unique, on the ID column, I only recieve the levels (or each unique ID), but I want to keep the other attributes as well... I have tried to use apply(x,2,unique(data$ID)), but this does not work either... Any help is highly appreciated!

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  • 0/1 Knapsack with irrational weights

    - by user356106
    Consider the 0/1 knapsack problem. The standard Dynamic Programming algorithm applies only when the capacity as well as the weights to fill the knapsack with are integers/ rational numbers. What do you do when the capacity/weights are irrational? The issue is that we can't memoize like we do for integer weights because we may need potentially infinite decimal places for irrational weights - leading to an infinitely large number of columns for the Dynamic Programming Table . Is there any standard method for solving this? Any comments on the complexity of this problem? Any heuristics? What about associated recurrences like (for example): f(x)=1, for x< sqrt(2) f(x)=f(x-sqrt(2))+sqrt(3)

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  • how to find datakeys in oncheckedchanged event ?

    - by subodh
    <asp:Panel ID="pnlFocusAreaPanel" runat="server" GroupingText="Focus Area" Width="800"> <table cellspacing="0" cellpadding="0" width="750"> <tr> <td> <asp:GridView ID="dgFocusAreaDetails" runat="server" Width="100%" CssClass="dgStyle" AutoGenerateColumns="False" BorderColor="Silver" BorderWidth="1px" CellPadding="0" ShowHeader="False" OnSelectedIndexChanged="dgFocusAreaDetails_SelectedIndexChanged" DataKeyNames="PK_ID"> <FooterStyle Font-Underline="True" HorizontalAlign="Center" VerticalAlign="Middle"> </FooterStyle> <Columns> <asp:TemplateField HeaderText="Focus Area" HeaderStyle-BackColor="Silver"> <ItemStyle Width="90%" /> <ItemTemplate> <asp:Label runat="server" ID="lblFocusArea" Text='<%# DataBinder.Eval(Container.DataItem, "FOCUS_AREA_NAME").ToString()%>'> </asp:Label> </ItemTemplate> </asp:TemplateField> <asp:TemplateField HeaderText="Is Current Valid" HeaderStyle-BackColor="Silver"> <ItemStyle Width="10%" HorizontalAlign="Center" /> <ItemTemplate> <asp:CheckBox ID="chkFocusArea" runat="server" OnCheckedChanged="OnCheckChangedEvent" AutoPostBack="true" /> </ItemTemplate> </asp:TemplateField> </Columns> </asp:GridView> </td> </tr> <tr> <td align="left"> <asp:TextBox ID="txtFocusArea" runat="server" Width="300px" CausesValidation="true" CssClass="txtStyle" ValidationGroup="focusArea"> </asp:TextBox> <cc1:TextBoxWatermarkExtender ID="txtFocusAreaWaterMark" runat="server" TargetControlID="txtFocusArea" WatermarkText="Add Focus Area" WatermarkCssClass="WaterMarkStyle"> </cc1:TextBoxWatermarkExtender> <asp:Button ID="btnAddFocusArea" runat="server" Text="AddFocusArea" CssClass="btnStyle" OnClick="btnAddFocusArea_Click" CausesValidation="true" ValidationGroup="focusArea" /> <asp:RequiredFieldValidator ID="reqtxtFocusArea" runat="server" ControlToValidate="txtFocusArea" ErrorMessage="Please enter focus area" Display="Dynamic" ValidationGroup="focusArea"> </asp:RequiredFieldValidator> <asp:RegularExpressionValidator ID="regexFocusArea" runat="server" ErrorMessage="Invalid characters(<,>,#)" ControlToValidate="txtFocusArea" ValidationExpression="^([^&lt;#&gt;]*)$" ValidationGroup="focusArea" Display="Dynamic" SetFocusOnError="true"> </asp:RegularExpressionValidator> </td> </tr> </table> </asp:Panel> and in code behind protected void btnAddFocusArea_Click(object sender, EventArgs e) { string strFocusArea = txtFocusArea.Text; OleDbConnection myConnection = new OleDbConnection(ConfigurationSettings.AppSettings["SQLConnectionString"]); if (strFocusArea == string.Empty || strFocusArea == txtFocusAreaWaterMark.WatermarkText) { lblError.Text = "Focus area is not entered"; } else { string insertQuery = "INSERT INTO LK_CODECAT_FOCUS_AREA(FOCUS_AREA_NAME,FK_ADDED_BY,ADDED_ON) "+ " VALUES('" + strFocusArea + "', "+Session["UserID"] +", GETDATE())"; try { myConnection.Open(); OleDbCommand myCommandToInsert = new OleDbCommand(insertQuery, myConnection); myCommandToInsert.ExecuteNonQuery(); } catch(Exception exc) { ExceptionLogger.LogException(exc); } finally { if (myConnection != null) { myConnection.Close(); } } PopulateFocusArea(); } txtFocusArea.Text = txtFocusAreaWaterMark.WatermarkText; } private void PopulateFocusArea() { OleDbConnection myConnection = new OleDbConnection(ConfigurationSettings.AppSettings["SQLConnectionString"]); string selectQuery = "SELECT PK_ID, FOCUS_AREA_NAME, IS_CURRENT_FOCUS FROM LK_CODECAT_FOCUS_AREA LKCFA ORDER BY FOCUS_AREA_NAME"; if (Session["RoleID"].ToString() == "1" || ((Session["WorkID"].ToString() != "9") || (Session["WorkID2"].ToString() != "9") || (Session["WorkID3"].ToString() != "9"))) { try { myConnection.Open(); OleDbCommand myCommandFocusArea = new OleDbCommand(selectQuery, myConnection); OleDbDataAdapter myAdapter = new OleDbDataAdapter(myCommandFocusArea); DataSet ds = new DataSet(); myAdapter.Fill(ds); dgFocusAreaDetails.DataSource = ds; dgFocusAreaDetails.ShowHeader = true; dgFocusAreaDetails.DataBind(); } catch (Exception exc) { ExceptionLogger.LogException(exc); } finally { if (myConnection != null) { myConnection.Close(); } } } } protected void dgFocusAreaDetails_SelectedIndexChanged(object sender, EventArgs e) { string selectedCategory = dgFocusAreaDetails.SelectedRow.Cells[1].Text; int index = dgFocusAreaDetails.SelectedIndex; lblError.Text = dgFocusAreaDetails.DataKeys[index].Value.ToString(); } public void OnCheckChangedEvent(object sender, EventArgs e) { CheckBox chk = (CheckBox)sender; string chkfocusarea = ((Control)chk).ID; //string focusAreaDetails = dgFocusAreaDetails.SelectedRow.Cells[0].Text; int index =Convert.ToInt32(dgFocusAreaDetails.SelectedIndex); if (chk.Checked) { string updateQuery = "UPDATE [LK_CODECAT_FOCUS_AREA] SET [IS_CURRENT_FOCUS] = 1 WHERE PK_ID = " +Convert.ToInt32( dgFocusAreaDetails.DataKeys[index].Value)+" "; } else { lblError.Text = "unchecked"; } } i want to know how i find the datakeyvalue on checked event.

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  • DataGridView: can you add an unbound column to a Data Bound grid?

    - by Jack Johnstone
    I´m using Visual Studio 2008, C# DataGridView: can you add an unbound column to a Data Bound grid? It seems pretty simple, just select the properties ("DataGridView Tasks box") for the data bound DataGridView, and select Add unbound column. However, when in runtime there will be a System.FormatException - which I can understand, as I don´t know how to "initialize" the cells in the new unbound columns. I was planning initializing it programmatically via CellFormatting event - but so far I´m failing. Any tips? Just want to get it up and running in SOME way...

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  • How to make schema and code dynamic?

    - by Jonarch
    I want to make my database schema and application code as dynamic as possible to handle "unknown" use cases and changes. Developing in PHP and MySQL. Twice now I have had to change my entire schema including table and column names and this means the developers have to go back to the application code and modify all the SQL queries and table/columns names. So to prevent this I want to if just like we do on pages where we have page content, title bar etc dynamic like a %variable%, can we do it for the schema and maybe even for the php code functions and classes somehow? It takes weeks to re-do all changes like this vs if it is dynamic it can be done in under a day.

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  • There has to be an easier way.. pulling data from mysql

    - by Daniel Hunter
    I need to pull 3 values from a table and assign each one to a variable each value is based on to columns, a type and an id $ht_live_query = mysql_query("SELECT htcode FROM coupon WHERE pid='$pid' AND type='L'"); $ht_live_result = mysql_fetch_array($ht_live_query); $htCODE_Live = $ht_live_result['htcode']; You can see that I am assigning the desired value to the variable $htL $ht_General_query = mysql_query("SELECT htcode FROM coupon WHERE pid='$pid' AND type='G'"); $ht_General_result = mysql_fetch_array($ht_General_query); $htCODE_General = $ht_General_result['htcode']; $ht_Reward_query = mysql_query("SELECT htcode FROM coupon WHERE pid='$pid' AND type='R'"); $ht_Reward_result = mysql_fetch_array($ht_Reward_query); $htCODE_Reward = $ht_Reward_result ['htcode']; I know I am doing this the hard way but can not figure out how to do the foreach or while loop to attain the desired results.

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  • How to create and show views on command request?

    - by user365575
    Hi, I've started using mvvm-light toolkit , and new to WPF. My question is: I want to create an pplication where the main window includes a grid with 2 columns 1 col command and col2 will display views when each command will be pressed. i want the views to be created on command and colsed from it's own view. I've tried to figure out how to do it but with no success. I don't know how to write this kind of funconality using the mvvm light. I just know how to create main window with mainview and another view creted already on load. Please help me out.. I'm using 2008 WPF3.5 Shirly. Make me happy today.. i've just started the week!!!

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  • tsql sum data and include default values for missing data

    - by markpirvine
    Hi, I would like a query that will shouw a sum of columns with a default value for missing data. For example assume I have a table as follows: type_lookup: id name 1 self 2 manager 3 peer And a table as follows data: id type_lookup_id value 1 1 1 2 1 4 3 2 9 4 2 1 5 2 9 6 1 5 7 2 6 8 1 2 9 1 1 After running a query I would like a result set as follows: type_lookup_id value 1 13 2 25 3 0 I would like all rows in type_lookup table to be included in the result set - even if they don't appear in the data table. Any help would be greatly appreciated, Mark

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