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  • Apache & SVN on Ubuntu - Post-commit hook fails silently, pre-commit hook “Permission Denied”

    - by 113169587962668775787
    I've been struggling for the past couple days to get post-commit email notifications working on my SVN server (running via HTTP with Apache2 on Ubuntu 9.10). SVN commits work fine, but for some reason the hooks are not being properly executed. Here are the configuration settings: - Users access the repo via HTTP with the apache dav_svn module (I created users/passwords via htpasswd in a dav_svn.passwd file). dav_svn.conf: <Location /svn/repos> DAV svn SVNPath /home/svn/repos AuthType Basic AuthName "Subversion Repository" AuthUserFile /etc/apache2/dav_svn.passwd Require valid-user </Location> I created a post-commit hook file that writes a simple message to a file in the repository root: /home/svn/repos/hooks/post-commit: #!/bin/sh REPOS="$1" REV="$2" /bin/echo 'worked' > ${REPOS}/postcommit.log I set the entire repository to be owned by www-data (the apache user), and assigned 755 permissions to the post-commit script when I test the post-commit script using the www-data user in an empty environment, it works: sudo -u www-data env - /home/svn/repos/hooks/post-commit /home/svn/repos 7 But when I commit on a client machine, the commit is successful, but the post-commit script does not seem to be executed. I also tried running a simple script for the pre-commit hook, and I get an error, even with an empty pre-commit script: "Commit failed (details follow): Can't create null stdout for hook '/home/svn/repos/hooks/pre-commit': Permission denied" I did a few searches on Google for this error and I presume that this is an issue with the apache user (www-data) not having adequate permissions, specifically to execute /dev/null. I also read that the reason post-commit fails silently is because that it doesn't report with stdout. Anyway, I've also tried giving the apache user (www-data) ownership of the entire repository, and edited the apache virtualhost to allow operations on the server root, and I'm still getting permission denied /etc/apache2/sites-available/primarydomain.conf <Directory /> Options FollowSymLinks AllowOverride None Order allow,deny Allow from all </Directory> Any ideas/suggestions would be greatly appreciated! Thanks

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  • NGINX SSI Not working

    - by Mike Kelly
    I'm having trouble getting SSI to work on NGINX. You can see the problem if you hit http://www.bakerycamp.com/test.shtml. Here is the contents of that file: <!--# echo hi --> If you hit this in a browser, you see the SSI directive in the content - so apparently NGINX is not interpreting the SSI directive. My NGINX config file looks like this: server { listen 80; server_name bakerycamp.com www.bakerycamp.com; access_log /var/log/nginx/bakerycamp.access.log; index index.html; root /home/bakerycamp.com; location / { ssi on; } # Deny access to all hidden files and folders location ~ /\. { access_log off; log_not_found off; deny all; } } I did not build NGINX from sources but installed it using apt-get. I assume it has the SSI module (since that is default) but perhaps not? Should I just bite the bullet and rebuild from sources? Is there anyway to tell if the installed NGINX supports SSI and my config is just wrong?

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  • Getting Perl DBD::mysql working on OS X 10.7?

    - by Bart B
    I can't seem to get Perl & MySQL to talk to each other on OS X 10.7 Lion. I did all the installs by the book, I used Oracle's PKG installer for the latest MySQL Community Server, and I installed DBI and DBD::mysql via CPAN. There were not problems at all during the install, but, when I try to USE DBD::mysql to connect to my local DB server I get the following error: install_driver(mysql) failed: Can't load '/Library/Perl/5.12/darwin-thread-multi-2level/auto/DBD/mysql/mysql.bundle' for module DBD::mysql: dlopen(/Library/Perl/5.12/darwin-thread-multi-2level/auto/DBD/mysql/mysql.bundle, 1): Library not loaded: /usr/local/mysql/lib/libmysqlclient.16.dylib Referenced from: /Library/Perl/5.12/darwin-thread-multi-2level/auto/DBD/mysql/mysql.bundle Reason: image not found at /System/Library/Perl/5.12/darwin-thread-multi-2level/DynaLoader.pm line 204. at (eval 3) line 3 Compilation failed in require at (eval 3) line 3. Perhaps a required shared library or dll isn't installed where expected After a lot of googling all I could find were suggested hacks, so I gave this one a go: http://arkoftech.wordpress.com/2011/02/10/fixing-dbdmysql-for-mysql-5-5-89-under-macos-10-6-x/ I had to update some of the paths in the instructions since on Lion it's Perl 5.12 not 5.10. After doing that I got a new error: dyld: lazy symbol binding failed: Symbol not found: _mysql_init Referenced from: /Library/Perl/5.12/darwin-thread-multi-2level/auto/DBD/mysql/mysql.bundle Expected in: flat namespace dyld: Symbol not found: _mysql_init Referenced from: /Library/Perl/5.12/darwin-thread-multi-2level/auto/DBD/mysql/mysql.bundle Expected in: flat namespace Trace/BPT trap: 5 There must be a simple way to get MySQL & Perl working on OS X? - HELP!

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  • Apache2 refuses to process php files - "Snow Leopard" OSX 10.6.4

    - by w-01
    I have a macbook pro i5. my understanding is that by default it should be able to serve php5. i have uncommented the relevant line in /etc/apache2/httpd.conf LoadModule php5_module libexec/apache2/libphp5.so I have restarted apache with sudo apachectl -k restart and when i try to access a file with a php extension, Apache prompts me to download the file. i.e. instead of processing the php and sending me html, it thinks i want to download the file.... when i look in apache error log i see this [Fri Nov 12 10:16:14 2010] [notice] Apache/2.2.14 (Unix) PHP/5.3.2 mod_ssl/2.2.14 OpenSSL/0.9.8l DAV/2 mod_wsgi/3.2 Python/2.6.1 configured -- resuming normal operations so it looks like php5 is loading properly. I'd like to know either: How do i fix this? or How do I reinstall apache2 so that it's like i just installed the os? thanks in advance update @Zayne - the end of my httpd.conf has Include /private/etc/apache2/other/*.conf and i have a file /etc/apache2/other/php.conf with the contents <IfModule php5_module> AddType application/x-httpd-php .php AddType application/x-httpd-php-source .phps <IfModule dir_module> DirectoryIndex index.html index.php </IfModule> </IfModule> @Zayne I've already copied php.ini.default to php.ini in the same folder. when i run sudo apachectl configtest i get /usr/sbin/apachectl: line 82: ulimit: open files: cannot modify limit: Invalid argument httpd: Could not reliably determine the server's fully qualified domain name, using ::1 for ServerName Syntax OK furthermore i decided to try apachectl -M which shows all loaded modules Most importantly in the list of loaded modules i got Loaded Modules: php5_module (shared) Since the module is being loaded, it seems like the issue has more to do with making apache use php engine to process the php files.... so something wrong with the ifmodule directive?

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  • XDEBUG/PHP doesn't dump profile even when set up properly?

    - by John D.
    I installed xdebug from source, but also tried my package manager (separately) and they both are loaded correctly (verified by restarting Apache and seeing the xdebug copyright info in phpinfo()) but they do not dump profiling information. Out of the 40 different attempts of configuration it logged once or twice but I lost what I did, I tried with first only loading the module in php.ini with no settings, but it didn't log to /tmp/. I tried many different settings but my current is now: xdebug.profiler_enable = Off xdebug.profiler_enable_trigger = 1 xdebug.profiler_output_dir = "/tmp/" xdebug.profiler_output_name = "profiler.%t" Of course I call my script through 127.0.0.1/test.php?XDEBUG_PROFILE, which is for enable_trigger. Do you know why it would not dump profiler information? nobody (Arch Linux) can write to /tmp/ as it has before, so I'm sure it is not a permissions error. Apache's error_log does not tell me anything about xdebug either, as it has loaded correctly. It just does not "work"! EDIT: I made a subfolder "xdebug_profiles" in /tmp/ and chown'ed it to nobody, and now it works flawlessly. I'm not sure why it couldn't write before, I guess it's just a caveat with nobody on Arch. I answered my own question , not enough points to answer it or comment, so consider this answered.

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  • Compiling mod_auth_kerb on OS X

    - by bshacklett
    I'm trying to get mod_auth_kerb installed, but I can't seem to find any information on compiling it on OS X. I'm getting the following when I attempt to compile: ./apxs.sh "-I. -Ispnegokrb5 -I/include " "-dynamic -g -O2 -arch x86_64 -Wl,-search_paths_first -lgssapi_krb5 -lkrb5 -lk5crypto -lcom_err -lresolv -lresolv" "" "/Applications/XAMPP/xamppfiles/bin/apxs" "-c" "src/mod_auth_kerb.c" /Applications/XAMPP/xamppfiles/build/libtool --silent --mode=compile gcc -prefer-pic -I/Applications/XAMPP/xamppfiles/include -L/Applications/XAMPP/xamppfiles/lib -mmacosx-version-min=10.4 -arch i386 -arch ppc -DDARWIN -DSIGPROCMASK_SETS_THREAD_MASK -no-cpp-precomp -I/Applications/XAMPP/xamppfiles/include -I/Applications/XAMPP/xamppfiles/include -I/Applications/XAMPP/xamppfiles/include -I/Applications/XAMPP/xamppfiles/include -I. -Ispnegokrb5 -I/include -c -o src/mod_auth_kerb.lo src/mod_auth_kerb.c && touch src/mod_auth_kerb.slo src/mod_auth_kerb.c: In function ‘authenticate_user_krb5pwd’: src/mod_auth_kerb.c:1030: warning: passing argument 8 of ‘verify_krb5_user’ discards qualifiers from pointer target type src/mod_auth_kerb.c: In function ‘authenticate_user_krb5pwd’: src/mod_auth_kerb.c:1030: warning: passing argument 8 of ‘verify_krb5_user’ discards qualifiers from pointer target type /Applications/XAMPP/xamppfiles/build/libtool --silent --mode=link gcc -o src/mod_auth_kerb.la -dynamic -g -O2 -arch x86_64 -Wl,-search_paths_first -lgssapi_krb5 -lkrb5 -lk5crypto -lcom_err -lresolv -lresolv -rpath /Applications/XAMPP/xamppfiles/modules -module -avoid-version src/mod_auth_kerb.lo ld: warning: in src/.libs/mod_auth_kerb.o, missing required architecture x86_64 in file warning: no debug symbols in executable (-arch x86_64) I'm configuring as follows: ./configure --with-krb4=no CFLAGS='-g -O2 -arch x86_64' I should mention that I'm using XAMPP with the development package on this machine.

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  • Windows Terminal Server: occasional memory violation for applications

    - by syneticon-dj
    On a virtualized (ESXi 4.1) Windows Server 2008 SP2 32-bit machine which is used as a terminal server, I occasionally (approximately 1-3 event log entries a day) see applications fail with an 0xc0000005 error - apparently a memory access violation. The problem seems quite random and only badly reproducable - applications may run for hours, fail with 0xc0000005 and restart quite fine or just throw the access violation at startup and start flawlessly at the second attempt. The names of executables, modules and offset addresses vary, although a single executable tends to fail with same modules and the same memory offset addresses (like "OUTLOOK.EXE" repeatedly failing on module "olmapi32.dll" with the offset "0x00044b7a") - even across multiple user's logons and with several days passing without a single failure inbetween. The offset addresses seem to change across reboots, however. Only selective executables seem affected by the problem, although I may simply not be seeing a sufficient number of application runs from the other ones. I first suspected a possible problem with the physical machine's RAM, but ruled this out as a rather unlikely cause - the memory comes with ECC and I've already moved the virtual machine across several times, without any perceptable change. I've seen that DEP was enabled in "OptOut" mode on this machine: C:\Users\administrator>wmic OS Get DataExecutionPrevention_SupportPolicy DataExecutionPrevention_SupportPolicy 3 and tried changing the policy to OptIn via startup options: bcdedit.exe /set {current} nx OptIn but have yet to see any effect - I also would expect Outlook 12 or Adobe Reader 9 (both affected applications) to play well with DEP. Any other ideas why the apps may be failing?

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  • How \Deleted flag can be unset for all mails in cyrus-imapd mailbox?

    - by Sachin Divekar
    I have a 5GB mailbox which I moved using imapsync. But somehow I messed up with --delete/--delete2 option and end up with almost all the messages having \Deleted flag set. I do not have delayed expunge enabled, so I can not use unexpunge utility. I am using cyrus-imapd v2.3.7. Using cyrus-imapd's debugging feature I found out that email client(Roundcube in my case) fires following IMAP command to unset it. UID STORE 179 -FLAGS.SILENT (\Deleted) I don't know if somehow I can fire this command for all the mails. Is there any way I can unset \Deleted flag for all the mails in the mailbox? UPDATE: Using @geekosaur's tip of specifying range of message-ids in the above command, I could solve it for one mailbox under INBOX like INBOX.folder1. Is there any way I can do it for multiple mailboxes under INBOX recursively? Now I am working on solving it using/creating some script, maybe using Perl's IMAP related module. But still I need to solve it asap so inputs are welcome.

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  • CENTOS 6 - How to install php-mysql when php-common @remi is present?

    - by Multitut
    I am having troubles adding mysql support for my php installation, this installation was made using a ready to use-package that came with our VPS. This is my php.info: http://snake.quetzalcoatech.com/info.php I am trying to install php mysql using: yum install php-mysql And get this output: Loaded plugins: fastestmirror Loading mirror speeds from cached hostfile * base: mirrors.serveraxis.net * extras: mirror.fdcservers.net * updates: bay.uchicago.edu Setting up Install Process Resolving Dependencies --> Running transaction check ---> Package php-mysql.x86_64 0:5.3.3-14.el6_3 will be installed --> Processing Dependency: php-common = 5.3.3-14.el6_3 for package: php-mysql-5.3.3-14.el6_3.x86_64 --> Finished Dependency Resolution Error: Package: php-mysql-5.3.3-14.el6_3.x86_64 (updates) Requires: php-common = 5.3.3-14.el6_3 Installed: php-common-5.3.17-2.el6.remi.x86_64 (@remi) php-common = 5.3.17-2.el6.remi Available: php-common-5.3.3-3.el6_2.8.x86_64 (base) php-common = 5.3.3-3.el6_2.8 Available: php-common-5.3.3-14.el6_3.x86_64 (updates) php-common = 5.3.3-14.el6_3 You could try using --skip-broken to work around the problem You could try running: rpm -Va --nofiles --nodigest I am a noob using Linux, so could you tell me which command should I use to install a compatible php-mysql module? Thank you so much!

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  • How can the little guys effectively learn and use puppet?

    - by drumfire
    Six months ago, in our not-for-profit project we decided to start migrating our system management to a Puppet controlled environment because we are expecting our number of servers to grow substantially between now and a year from now. Since the decision has been made our IT guys have become a bit too annoyed a bit too often. Their biggest objections are: "We're not programmers, we're sysadmins"; Modules are available online but many differ from one another; wheels are being reinvented too often, how do you decide which one fits the bill; Code in our repo is not transparent enough, to find how something works they have to recurse through manifests and modules they might have even written themselves a while ago; One new daemon requires writing a new module, conventions have to be similar to other modules, a difficult process; "Let's just run it and see how it works" Tons of hardly known 'extensions' in community modules: 'trocla', 'augeas', 'hiera'... how can our sysadmins keep track? I can see why a large organisation would dispatch their sysadmins to puppet courses to become puppet masters. But how would smaller players get to learn puppet to a professional level if they do not go to courses and basically learn it via their browser and editor?

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  • Solaris 10 zlogin logs in, logs out immediately

    - by Spelevink
    On a SPARC v445 running Solaris 10 9/10, had to rebuild rpool and reattached the three existing mirrored zpools on the other existing disks, with their zfs filesystems and NG zones intact. The zones have been configured with zonecfg -z ZONENAME create etc. ... and are now online using zoneadm -z ZONENAME attach -U then simply booting after being in installed state, but I cannot zlogin to any of the zones except one. It shows that I am logged in, then a blank line, then immediately logged out again. When I try to login using zlogin -C ZONENAME I cannot; the error message is: May 15 15:43:46 <hostname> login: open_module: stat(/usr/lib/security/pam_mkhomedir.so.1) failed: no such file or directory. May 15 15:43:46 <hostname> login: load_modules: cannot open module /usr/lib/security/pam_mkhomedir.so.1 But /usr/lib/pam_mkhomedir.so.1 does not exist, and it does not exist on my other servers, but those zones are accessible using zlogin. I can only zlogin to the zones with zlogin -S ZONENAME. What to do next? Thank you.

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  • phpBB configuration problem under Nginx

    - by zvikico
    Hi, I have a phpBB site running with Nginx (PHP via FastCGI). It works OK. However, some specific actions like moving or deleting a topic fail. Instead, I'm redirected to the forum index. I think it is a problem with the URLs redirection or rewriting. My rewrite rule looks like this: if (!-e $request_filename) { rewrite ^/(.*)$ /index.php?q=$1 last; break; } Any help would be appreciated. My full configuration file is: server { listen 80; server_name forum.xxxxx.com; access_log /xxxxx/access.log; error_log /xxxxx/error.log; location = / { root /xxxxx/phpBB3/; index index.php; } location / { root /xxxxx/phpBB3/; index index.php index.html; if (!-e $request_filename) { rewrite ^/(.*)$ /index.php?q=$1 last; break; } } error_page 404 /index.php; error_page 403 /index.php; error_page 500 502 503 504 /index.php; # serve static files directly location ~* ^.+\.(jpg|jpeg|gif|css|png|js|ico)$ { access_log off; expires 30d; root /xxxxx/phpBB3/; break; } # hide protected files location ~* \.(engine|inc|info|install|module|profile|po|sh|.*sql|theme|tpl(\.php)?|xtmpl)$|^(code-style\.pl|Entries.*|Repository|Root|Tag|Template)$ { deny all; } location ~ \.php$ { fastcgi_pass 127.0.0.1:8888; fastcgi_index index.php; fastcgi_param SCRIPT_FILENAME /xxxxx/phpBB3/$fastcgi_script_name; fastcgi_param QUERY_STRING $query_string; fastcgi_param REQUEST_METHOD $request_method; fastcgi_param CONTENT_TYPE $content_type; fastcgi_param CONTENT_LENGTH $content_length; fastcgi_param REMOTE_ADDR $remote_addr; fastcgi_param REMOTE_PORT $remote_port; } }

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  • Python easy_install confused on Mac OS X

    - by slf
    environment info: $ echo $PATH /opt/local/bin:/opt/local/sbin:/sw/bin:/sw/sbin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/X11/bin:/usr/X11R6/bin:/opt/local/bin:/Developer/Platforms/iPhoneOS.platform/Developer/usr/bin:~/.utility_scripts $ which easy_install /usr/bin/easy_install specifically, let's try the simplejson module (I know it's the same thing as import json in 2.6, but that isn't the point) $ sudo easy_install simplejson Searching for simplejson Reading http://pypi.python.org/simple/simplejson/ Reading http://undefined.org/python/#simplejson Best match: simplejson 2.1.0 Downloading http://pypi.python.org/packages/source/s/simplejson/simplejson-2.1.0.tar.gz#md5=3ea565fd1216462162c6929b264cf365 Processing simplejson-2.1.0.tar.gz Running simplejson-2.1.0/setup.py -q bdist_egg --dist-dir /tmp/easy_install-Ojv_yS/simplejson-2.1.0/egg-dist-tmp-AypFWa The required version of setuptools (>=0.6c11) is not available, and can't be installed while this script is running. Please install a more recent version first, using 'easy_install -U setuptools'. (Currently using setuptools 0.6c9 (/System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python)) error: Setup script exited with 2 ok, so I'll update setuptools... $ sudo easy_install -U setuptools Searching for setuptools Reading http://pypi.python.org/simple/setuptools/ Best match: setuptools 0.6c11 Processing setuptools-0.6c11-py2.6.egg setuptools 0.6c11 is already the active version in easy-install.pth Installing easy_install script to /usr/local/bin Installing easy_install-2.6 script to /usr/local/bin Using /Library/Python/2.6/site-packages/setuptools-0.6c11-py2.6.egg Processing dependencies for setuptools Finished processing dependencies for setuptools I'm not going to speculate, but this could have been caused by any number of environment changes like the Leopard - Snow Leopard upgrade, MacPorts or Fink updates, or multiple Google App Engine updates.

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  • Whitelist IP from google-authenticator in sshd pam

    - by spudwaffle
    My Ubuntu 12.04 server uses the google-authenticator pam module to provide two step authentication for ssh. I need to make it so that a certain IP does not need to type the verification code. The /etc/pam.d/sshd file is below: # PAM configuration for the Secure Shell service # Read environment variables from /etc/environment and # /etc/security/pam_env.conf. auth required pam_env.so # [1] # In Debian 4.0 (etch), locale-related environment variables were moved to # /etc/default/locale, so read that as well. auth required pam_env.so envfile=/etc/default/locale # Standard Un*x authentication. @include common-auth # Disallow non-root logins when /etc/nologin exists. account required pam_nologin.so # Uncomment and edit /etc/security/access.conf if you need to set complex # access limits that are hard to express in sshd_config. # account required pam_access.so # Standard Un*x authorization. @include common-account # Standard Un*x session setup and teardown. @include common-session # Print the message of the day upon successful login. session optional pam_motd.so # [1] # Print the status of the user's mailbox upon successful login. session optional pam_mail.so standard noenv # [1] # Set up user limits from /etc/security/limits.conf. session required pam_limits.so # Set up SELinux capabilities (need modified pam) # session required pam_selinux.so multiple # Standard Un*x password updating. @include common-password auth required pam_google_authenticator.so I've already tried adding a auth sufficient pam_exec.so /etc/pam.d/ip.sh line above the google-authenticator line, but I can't understand how to check an IP adress in the bash script.

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  • Dynamically add Server 2008 NLB Nodes

    - by Nick Jacques
    Hi All, I have a small NLB cluster for Terminal Servers. One of the things we're looking at doing for this particular project (this is for a college class) is dynamically creating Terminal Servers. What we've done is create policies for a certain OU, that sets the proper TS Farm properties and installs the Terminal Server role and NLB feature. Now what we'd like to do is create a script to be run on our Domain Controller to add hosts to the preexisting NLB cluster. On our Server 2008 R2 Domain Controller, I was thinking of running the following PowerShell script I've kind of hacked together. Any thoughts on if this will work? Is there any way I can trigger this script to run on the DC once all the scripts to install roles are done on the various Terminal Servers? Thanks very much in advance!! Import-Module NetworkLoadBalancingClusters $TermServs = @() $Interface = "Local Area Connection" $ou = [ADSI]"LDAP://OU=Term Servs,DC=example,DC=com" foreach ($child in $ou.psbase.Children) { if ($child.ObjectCategory -like '*computer*') {$TermServs += $child.Name} } foreach ($TS in $TermServs) { Get-NlbCluster 172.16.0.254 | Add-NlbClusterNode -NewNodeName $TS -NewNodeInterface $Interface }

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  • pam debugging "check pass; user unknown"

    - by lvc
    I am attempting to get Prosody authenticating with its auth_pam module. It is configured to use the pam service name xmpp. The pam.d/xmpp file is copied straight from the one configured for dovecot (originally taken from, I think, dovecot's documentation), which is known to be working: # cat /etc/pam.d/xmpp auth required pam_unix.so nullok debug account required pam_unix.so debug Logging in with dovecot works wonderfully. Logging in with prosody, with exactly the same username and password, causes Prosody to return 'Not authorized', and the following in journalctl -f: Oct 29 22:12:14 riscque.net prosody[9396]: c2s1d010b0: Client sent opening <stream:stream> to riscque.net Oct 29 22:12:14 riscque.net prosody[9396]: c2s1d010b0: Sent reply <stream:stream> to client Oct 29 22:12:14 riscque.net prosody[9396]: [178B blob data] Oct 29 22:12:14 riscque.net unix_chkpwd[9408]: check pass; user unknown Oct 29 22:12:14 riscque.net prosody[9396]: pam_unix(xmpp:auth): conversation failed Oct 29 22:12:14 riscque.net prosody[9396]: pam_unix(xmpp:auth): unable to obtain a password Oct 29 22:12:14 riscque.net prosody[9396]: pam_unix(xmpp:auth): auth could not identify password for [lvc] Oct 29 22:12:14 riscque.net prosody[9396]: riscque.net:saslauth: sasl reply: <failure xmlns='urn:ietf:params:xml:ns:xmpp-sasl'><not-authorized/><text>Unable to authorize you with the authentication credentials you&apos;ve sent.</text></failure> This series of errors seems mutually contradictory - first it says "user unknown", but then that it can't obtain the password for lvc - this username certainly exists on the system. What is likely going on here, and how would I debug this further?

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  • (solved) `ssh foo "<command/>"` not loading remote aliases?

    - by TomRoche
    summary: Why does this fail $ ssh foo 'R --version | head -n 1' bash: R: command not found but this succeeds $ ssh foo 'grep -nHe 'bashrc' ~/.bash_profile' /home/me/.bash_profile:3:# source the users .bashrc if it exists /home/me/.bash_profile:4:if [ -f "${HOME}/.bashrc" ] ; then /home/me/.bash_profile:5: source "${HOME}/.bashrc" $ ssh foo 'grep -nHe "\WR\W" ~/.bashrc' /home/me/.bashrc:118:alias R='/share/linux86_64/bin/R' $ ssh foo '/share/linux86_64/bin/R --version | head -n 1' R version 2.14.1 (2011-12-22) ? details: I am a (rootless) user on 2 clusters. One uses environment modules, so any given server on that cluster can provide (via module add) pretty much the same resources. The other cluster, on which I must also unfortunately work, has servers managed individually, so I get in the habit of doing, e.g., EXEC_NAME='whatever' for S in 'foo' 'bar' 'baz' ; do ssh ${SERVER} "${EXEC_NAME} --version" done This works fine for packages installed normally/consistently, but often (for reasons unknown to me) packages are not: e.g. (compare alias below to alias above), $ ssh bar 'R --version | head -n 1' bash: R: command not found $ ssh bar 'grep -nHe 'bashrc' ~/.bash_profile' /home/me/.bash_profile:3:# source the users .bashrc if it exists /home/me/.bash_profile:4:if [ -f "${HOME}/.bashrc" ] ; then /home/me/.bash_profile:5: source "${HOME}/.bashrc" $ ssh bar 'grep -nHe "\WR\W" ~/.bashrc' /home/me/.bashrc:118:alias R='/share/linux/bin/R' $ ssh bar '/share/linux86_64/bin/R --version | head -n 1' R version 2.14.1 (2011-12-22) Using aliases copes well with these install differences when I interactively shell into the server, but fails when I try to script ssh commands (as above); i.e., # interactively $ ssh foo ... foo> R --version calls my alias for R on remote host=foo, but # scripting $ ssh foo 'R --version' doesn't. What do I need to do to make ssh foo "<command/>" load my aliases on the remote host?

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  • Limit Apache 2 Memory Usage

    - by UltraNurd
    I am running a hobby webserver off of an ancient Blue & White G3/300 running Debian PPC Squeeze 2.6.30. The performance is okay for a while after a restart, but it eventually gets more and more bogged down. Right now it's at 76 days uptime, and the main culprit seems to be the memory usage of 10+ apache2 processes. I think I need to lower the values for StartServers, MinSpareServers, and/or MaxSpareServers, but I'm not sure which one to adjust, and there are three sections for each depending on which mpm module is in use. How do I tell which of the following sections I need to change, and what are some reasonable values given that the box has 448 MB physical memory (weird upgrade history of one each 64, 128, and 256 sticks)? <IfModule mpm_prefork_module> StartServers 5 MinSpareServers 5 MaxSpareServers 10 MaxClients 150 MaxRequestsPerChild 0 </IfModule> <IfModule mpm_worker_module> StartServers 2 MinSpareThreads 25 MaxSpareThreads 75 ThreadLimit 64 ThreadsPerChild 25 MaxClients 150 MaxRequestsPerChild 0 </IfModule> <IfModule mpm_event_module> StartServers 2 MaxClients 150 MinSpareThreads 25 MaxSpareThreads 75 ThreadLimit 64 ThreadsPerChild 25 MaxRequestsPerChild 0 </IfModule> There aren't any other instances of StartServers in my apache2.conf, but none of those mpm modules appear in mods-available or mods-enabled. Ideas? Thanks!

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  • Apache 2.2, worker mpm, mod_fcgid and PHP: Can't apply process slot

    - by mopoke
    We're having an issue on an apache server where every 15 to 20 minutes it stops serving PHP requests entirely. On occasions it will return a 503 error, other times it will recover enough to serve the page but only after a delay of a minute or more. Static content is still served during that time. In the log file, there's errors reported along the lines of: [Wed Sep 28 10:45:39 2011] [warn] mod_fcgid: can't apply process slot for /xxx/ajaxfolder/ajax_features.php [Wed Sep 28 10:45:41 2011] [warn] mod_fcgid: can't apply process slot for /xxx/statics/poll/index.php [Wed Sep 28 10:45:45 2011] [warn] mod_fcgid: can't apply process slot for /xxx/index.php [Wed Sep 28 10:45:45 2011] [warn] mod_fcgid: can't apply process slot for /xxx/index.php There is RAM free and, indeed, it seems that more php processes get spawned. /server-status shows lots of threads in the "W" state as well as some FastCGI processes in "Exiting(communication error)" state. I rebuilt mod_fcgid from source as the packaged version was quite old. It's using current stable version (2.3.6) of mod_fcgid. FCGI config: FcgidBusyScanInterval 30 FcgidBusyTimeout 60 FcgidIdleScanInterval 30 FcgidIdleTimeout 45 FcgidIOTimeout 60 FcgidConnectTimeout 20 FcgidMaxProcesses 100 FcgidMaxRequestsPerProcess 500 FcgidOutputBufferSize 1048576 System info: Linux xxx.com 2.6.28-11-server #42-Ubuntu SMP Fri Apr 17 02:45:36 UTC 2009 x86_64 GNU/Linux DISTRIB_ID=Ubuntu DISTRIB_RELEASE=9.04 DISTRIB_CODENAME=jaunty DISTRIB_DESCRIPTION="Ubuntu 9.04" Apache info: Server version: Apache/2.2.11 (Ubuntu) Server built: Aug 16 2010 17:45:55 Server's Module Magic Number: 20051115:21 Server loaded: APR 1.2.12, APR-Util 1.2.12 Compiled using: APR 1.2.12, APR-Util 1.2.12 Architecture: 64-bit Server MPM: Worker threaded: yes (fixed thread count) forked: yes (variable process count) Server compiled with.... -D APACHE_MPM_DIR="server/mpm/worker" -D APR_HAS_SENDFILE -D APR_HAS_MMAP -D APR_HAVE_IPV6 (IPv4-mapped addresses enabled) -D APR_USE_SYSVSEM_SERIALIZE -D APR_USE_PTHREAD_SERIALIZE -D SINGLE_LISTEN_UNSERIALIZED_ACCEPT -D APR_HAS_OTHER_CHILD -D AP_HAVE_RELIABLE_PIPED_LOGS -D DYNAMIC_MODULE_LIMIT=128 -D HTTPD_ROOT="" -D SUEXEC_BIN="/usr/lib/apache2/suexec" -D DEFAULT_PIDLOG="/var/run/apache2.pid" -D DEFAULT_SCOREBOARD="logs/apache_runtime_status" -D DEFAULT_ERRORLOG="logs/error_log" -D AP_TYPES_CONFIG_FILE="/etc/apache2/mime.types" -D SERVER_CONFIG_FILE="/etc/apache2/apache2.conf" Apache modules loaded: alias.load auth_basic.load authn_file.load authz_default.load authz_groupfile.load authz_host.load authz_user.load autoindex.load cgi.load deflate.load dir.load env.load expires.load fcgid.load headers.load include.load mime.load negotiation.load rewrite.load setenvif.load ssl.load status.load suexec.load PHP info: PHP 5.2.6-3ubuntu4.6 with Suhosin-Patch 0.9.6.2 (cli) (built: Sep 16 2010 19:51:25) Copyright (c) 1997-2008 The PHP Group Zend Engine v2.2.0, Copyright (c) 1998-2008 Zend Technologies

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  • Video card not detected on Lenovo T410 in Linux

    - by wich
    I have a T410 with an nVidia NVS 3100M, this is not a hybrid system, there is no Optimus. (No option in the BIOS for Optimus, lspci in linux as well as the Windows device manager only show the nVidia) Using lspci I see the GPU as a present device, however, I can not, for the life of me, get any video driver to work that will let me start an X session, every time X craps out with the error (EE) No devices detected. I have tried the nVidia binary blob, (with nvidia-config, made sure no nvidia support in the kernel), I have tried nouveau, I have tried nv, I have even tried generic vesa, nothing will work. When I compare the dmesg that I get when loading the nvidia kernel module, I see that it is missing some lines compared with another system that also has an nvidia card, specifically the line mentioning the GPU name (3100M) is not there. I have checked every option in the BIOS, there is nothing to control except for the BIOS video output port, which is set to the LCD panel. I have no idea anymore what the problem may be, or even how I can diagnose this problem further. Any help will be appreciated.

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  • Install Python setuptools on CentOS 6

    - by Ivan
    I'm trying to install setuptools with no success so far. When I do python3.3 ez_setup.py I get the following error: Extracting in /tmp/tmp6nn4cz Traceback (most recent call last): File "ez_setup.py", line 370, in <module> sys.exit(main()) File "ez_setup.py", line 367, in main return _install(tarball, _build_install_args(options)) File "ez_setup.py", line 55, in _install tar = tarfile.open(tarball) File "/usr/local/lib/python3.3/tarfile.py", line 1571, in open raise ReadError("file could not be opened successfully") tarfile.ReadError: file could not be opened successfully I've been reading and it seems that zlib-devel was not installed when the python installation was done. However, I did uncomment line 358 on Modules/Setup to enable zlib before compiling and if I try to import zlib on python3.3 console it works. Also, in case it helps, here is the ldd python3.3: # ldd `which python3.3` linux-vdso.so.1 => (0x00007fff79fda000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00002b96092da000) libdl.so.2 => /lib64/libdl.so.2 (0x00002b96094f6000) libutil.so.1 => /lib64/libutil.so.1 (0x00002b96096fa000) libz.so.1 => /lib64/libz.so.1 (0x00002b96098fe000) libm.so.6 => /lib64/libm.so.6 (0x00002b9609b12000) libc.so.6 => /lib64/libc.so.6 (0x00002b9609d95000) /lib64/ld-linux-x86-64.so.2 (0x00002b96090bc000) What can I do?

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  • Mod_Perl configuration for multiple domains

    - by daliaessam
    Reading the Mod_Perl module documentation, can we configure it on per domain basis, what I mean can we configure it to run on every domain or specific domain only. What I see in the docs is: Registry Scripts To enable registry scripts add to httpd.conf: Alias /perl/ /home/httpd/2.0/perl/ <Location /perl/> SetHandler perl-script PerlResponseHandler ModPerl::Registry PerlOptions +ParseHeaders Options +ExecCGI </Location> and now assuming that we have the following script: #!/usr/bin/perl print "Content-type: text/plain\n\n"; print "mod_perl 2.0 rocks!\n"; saved in /home/httpd/httpd-2.0/perl/rock.pl. Make the script executable and readable by everybody: % chmod a+rx /home/httpd/httpd-2.0/perl/rock.pl Of course the path to the script should be readable by the server too. In the real world you probably want to have a tighter permissions, but for the purpose of testing, that things are working, this is just fine. From what I understand above, we can run Perl scripts only from one specific folder that we put the directive above. So the question again, can we make this directive per domain for all domains or for specific number of domains?

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  • Installing VirtualBox on BackTrack 5

    - by m0skit0
    I'm getting this error when running VirtualBox's installation script: $ sudo ~/Downloads/VirtualBox-4.1.14-77440-Linux_x86.run Verifying archive integrity... All good. Uncompressing VirtualBox for Linux installation........... VirtualBox Version 4.1.14 r77440 (2012-04-12T16:20:44Z) installer Removing previous installation of VirtualBox 4.1.14 r77440 from /opt/VirtualBox Installing VirtualBox to /opt/VirtualBox tar: Record size = 8 blocks Python found: python, installing bindings... Building the VirtualBox kernel modules Error! Bad return status for module build on kernel: 3.2.6 (i686) Consult the make.log in the build directory /var/lib/dkms/vboxhost/4.1.14/build/ for more information. ERROR: binary package for vboxhost: 4.1.14 not found Here's the log: $ cat /var/lib/dkms/vboxhost/4.1.14/build/make.log DKMS make.log for vboxhost-4.1.14 for kernel 3.2.6 (i686) Sun May 13 14:32:52 CEST 2012 make: Entering directory `/usr/src/linux-headers-3.2.6' /usr/src/linux-headers-3.2.6/arch/x86/Makefile:39: /usr/src/linux-headers-3.2.6/arch/x86/Makefile_32.cpu: No such file or directory make: *** No rule to make target `/usr/src/linux-headers-3.2.6/arch/x86/Makefile_32.cpu'. Stop. make: Leaving directory `/usr/src/linux-headers-3.2.6' /usr/src/linux-headers-3.2.6/arch/x86/ directory: $ ls /usr/src/linux-headers-3.2.6/arch/x86/ Kconfig Makefile ia32 lguest mm pci tools video Kconfig.cpu boot kernel lib net platform um xen Kconfig.debug crypto kvm math-emu oprofile power vdso Makefile references on "cpu" $ cat /usr/src/linux-headers-3.2.6/arch/x86/Makefile | grep cpu include $(srctree)/arch/x86/Makefile_32.cpu # FIXME - should be integrated in Makefile.cpu (Makefile_32.cpu) Before upgrading to 3.X I didn't have this problem, the script would install VB correctly. Any ideas on what might be causing this? Thanks in advance!

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  • Heavy Apache memory usage

    - by Ree
    Recently I've noticed that httpd processes started to consume massive amounts of memory - after some time pretty much using almost all of the 2GB of RAM the server has and I don't have any memory left for other stuff. Here's what top tells me: 26409 apache 15 0 276m 152m 28m S 0 7.4 0:59.12 httpd 26408 apache 15 0 278m 151m 28m S 0 7.4 1:03.80 httpd 26410 apache 15 0 277m 149m 26m S 0 7.3 0:57.22 httpd 26405 apache 15 0 276m 148m 25m S 0 7.3 0:59.20 httpd 26411 apache 16 0 276m 146m 23m S 0 7.2 1:09.18 httpd 17549 apache 15 0 276m 144m 23m S 0 7.0 0:36.34 httpd 22095 apache 15 0 276m 136m 14m S 0 6.6 0:30.56 httpd It seems to me that each httpd process does not free the memory after handling a request. So they all sit at ~270MB which is BAD. Is there a way for me to know where all the memory goes and why it stays that way? I haven't done any server tweaking lately, so I'm sure it's not me who messed something up (haven't had the problem before). The server is used to serve PHP apps. EDIT: Apache is configured with prefork module and MaxRequestsPerChild is set to 4000.

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  • Plesk 10 - creating and using vhost.conf

    - by MrFidge
    I'm having some issues setting up and using a vhost.conf for one of my domains. So far none of the domains have required any extra configuration but now I need to use a PEAR module, so I'm looking to include /usr/share/pear in the PHP settings for the domain. vhost file created in /var/www/vhosts/domain.com/conf/vhost.conf <Directory /var/www/vhosts/domain.com/httpdocs> php_admin_value include_path ".:/usr/share/pear" </Directory> I then restart Plesk using: /usr/local/psa/admin/sbin/websrvmng --reconfigure-vhost --vhost-name=domain.com Or as plesk says that command is obsolete in Plesk 10 I've tried using /usr/local/psa/admin/sbin/httpdmng --reconfigure-domain domain.com And for good luck I've restarted apache too each time. Net result - none of the PEAR includes work unless I edit the include_path in /etc/php.ini! Any tips on how to get this MOFO working? I've had a look through the documentation but TBH I just don't have time to read 40 pages of Plesk manual for one line of code, this can't be that hard, surely! Thanks for any pointers, H

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