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  • Problem with SLATEC routine usage with gfortran

    - by user39461
    I am trying to compute the Bessel function of the second kind (Bessel_y) using the SLATEC's Amos library available on Netlib. Here is the SLATEC code I use. Below I have pasted my test program that calls SLATEC routine CBESY. PROGRAM BESSELTEST IMPLICIT NONE REAL:: FNU INTEGER, PARAMETER :: N = 2, KODE = 1 COMPLEX,ALLOCATABLE :: CWRK (:), CY (:) COMPLEX:: Z, ci INTEGER :: NZ, IERR ALLOCATE(CWRK(N), CY(N)) ci = cmplx (0.0, 1.0) FNU = 0.0e0 Z = CMPLX(0.3e0, 0.4e0) CALL CBESY(Z, FNU, KODE, N, CY, NZ, CWRK, IERR) WRITE(*,*) 'CY: ', CY WRITE(*,*) 'IERR: ', IERR STOP END PROGRAM And here is the output of the above program: CY: ( 5.78591091E-39, 5.80327020E-39) ( 0.0000000 , 0.0000000 ) IERR: 4 Ierr = 4 meaning there is some problem with the input itself. To be precise, the IERR = 4 means the following as per the header info in CBESY.f file: ! IERR=4, CABS(Z) OR FNU+N-1 TOO LARGE - NO COMPUTA- ! TION BECAUSE OF COMPLETE LOSSES OF SIGNIFI- ! CANCE BY ARGUMENT REDUCTION Clearly, CABS(Z) (which is 0.50) or FNU + N - 1 (which is 1.0) are not too large but still the routine CBESY throws the error message number 4 as above. The CY array should have following values for the argument given in above code: CY(1) = -0.4983 + 0.6700i CY(2) = -1.0149 + 0.9485i These values are computed using Matlab. I can't figure out what's the problem when I call CBESY from SLATEC library. Any clues? Much thanks for the suggestions/help. PS: if it is of any help, I used gfortran to compile, link and then create the SLATEC library file ( the .a file ) which I keep in the same directory as my test program above. shell command to execute above code: gfortran -c BesselTest.f95 gfortran -o a *.o libslatec.a a GD.

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  • Issue installing *gfortran*

    - by veerendar
    I am trying to installing gfortran on my ubuntu system and I am following the steps mentioned in http://gcc.gnu.org/wiki/GFortranBinaries32Linux , unfortunately one of the step in the installation steps to says Install using the following command: tar -xzvf gfortran-4.5-linux-i686.tar.gz -C / but the download link provides a .deb file which I have installed it. Now when I check for gfortran, it says not installed. Any clue? how should I follow the further? Steps I have completed are: 1) Installed libraries: GMP Library, MPFR Library, and MPC Library. 2)Downloaded the gfortran-4.6 Debian and installed using the cmd. sudo dpkg -i .deb anything else I need to do? do I need to create any path or symbolic link? please help,thanks! Please Note: I have no internet access and cannot use software center.

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  • how to install gfortran package on ubuntu 12.04 offline pc

    - by veerendar
    I have downloaded gfortran package from there site and now looking for installing it on the offline ubuntu 12.04 pc... please don't close this question stating possible duplicate. I am looking for steps to install the package by extracting and installing it. I don't want to use get-offline neither keryx nor to use some other online ubuntu systems. I am very much clear.. I have the downloaded package and I am looking forward for the steps to install the package with out accessing internet. Thanks!

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  • Teaching programming (languages) in central/northern Europe

    - by canavanin
    I hope this question is not going to be off-topic; in case you think there'd be a better place to ask it, please let me know. Anyway, I'm currently doing my PhD working in bioinformatics. I would, however, like to turn away from academia eventually and instead go into teaching programming or, preferably, programming languages (e.g. Perl, which feels like my "mother tongue"...) - not as a school teacher, but with a company (in Germany or Scandinavia). It'll take me another one to one and a half years to complete my PhD, so I would like to know how I could/should use that time to raise my chances of getting into the profession I'd be interested in. Are there any Perl certificates I should aim to obtain, for example? In case there's anything that comes to mind when reading this, please let me know. Thanks a lot in advance!

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  • define integer array fortran

    - by Praveen
    Hello friends, I am a newbie in Fortran. Can any1 tell me how to define an integer array in prior. E.g. I want to define an array with no.of days in 12 months. like... integer,allocatable(12,1) :: days days=[31,28,31,30,31,30,31,31,30,31,30,31] Is this syntax correct? If not, please let me know the correct one. Thanks Praveen

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  • reading unformatted fortran file in matlab - which precision?

    - by Griff
    I have just written out a file: real*8 :: vol_cel real*8, dimension(256,256,256) :: dense [... some operations] open(unit=8,file=fname,form="unformatted") write(8)dense(:,:,:)/vol_cell close(8) dense and vol_cell are real*8 variables. My code to read this in in Matlab: fid = fopen(fname,'r'); mesh_raw = fread(fid,256*256*256,'double'); fclose(fid); The min and max values clearly show that it is not reading it in correctly (Min is 0 and max is a largish positive real*8). min = 3.3622e+38 max = -3.3661e+38 What precision do I need to set in Matlab to make it read in the unformatted Fortran file? A somewhat related question: This Matlab code I am using reads binary files OK but not unformatted files. Though I am generating this new data on my Mac OSX using gfortran. It doesn't recognize form="binary" so I can't do it that way. Do I need to add some library?

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  • vim opens my folds on paste. how to prevent that ?

    - by Stefano Borini
    There's something weird going on in my fortran folding. This is the example file module foo contains subroutine hello() end subroutine hello subroutine hello() end subroutine subroutine hello() end subroutine end module foo subroutine hello() end subroutine subroutine hello() end subroutine subroutine hello() end subroutine and this is the vimrc syntax on au! BufRead,BufNewFile *.f90 setfiletype fortran set foldmethod=syntax let fortran_fold=1 The annoying thing is the following. If I cut (dd) and paste (P) a folded subroutine outside the module/end module block, the freshly pasted fold stay closed. If I paste it inside the module/end module block, the newly pasted folded region appears instead unfolded. Can you reproduce the issue (vim 7.2 here) and do you know any workaround/fix ?

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  • Compiling external C++ library (Octave) for iPhone (Fortran compiler missing?)

    - by Shaggy Frog
    A friend of mine asked me if it would be possible to port the Octave project to the iPhone. I haven't compiled an external package for an iPhone project before, so I downloaded the source code, and then used some scripts found on a couple of different Web sites (one, two) to try and build the libraries. However, when I try either of these scripts (which are nearly identical), they eventually die during the configure phase with the following error output: [...snip checks...] checking whether we are using the GNU Fortran 77 compiler... no checking whether accepts -g... no checking how to get verbose linking output from ... configure: WARNING: compilation failed checking for Fortran 77 libraries of ... rm: conftest.dSYM: is a directory checking for dummy main to link with Fortran 77 libraries... rm: conftest.dSYM: is a directory none checking for Fortran 77 name-mangling scheme... configure: error: cannot compile a simple Fortran program See `config.log' for more details. Is the problem that the iPhone SDK/Xcode doesn't include a Fortran cross-compiler, or am I doing something wrong?

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  • matlab precision determint problem

    - by ldigas
    I have the following program format compact; format short g; clear; clc; L = 140; J = 77; Jm = 10540; G = 0.8*10^8; d = L/3; for i=1:500000 omegan=1.+0.0001*i; a(1,1) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(1,2) = 2; a(1,3) = 0; a(1,4) = 0; a(2,1) = 1; a(2,2) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(2,3) = 1; a(2,4) = 0; a(3,1) = 0; a(3,2) = 1; a(3,3) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(3,4) = 1; a(4,1) = 0; a(4,2) = 0; a(4,3) = 2; a(4,4) = ((omegan^2)*(Jm/(G*J))*d^2)-2; if(abs(det(a))<1E-10) sprintf('omegan= %8.3f det= %8.3f',omegan,det(a)) end end Analytical solution of the above system, and the same program written in fortran gives out values of omegan equal to 16.3818 and 32.7636 (fortran values; analytical differ a little, but they're there somewhere). So, now I'm wondering ... where am I going wrong with this ? Why is matlab not giving the expected results ? (this is probably something terribly simple, but it's giving me headaches)

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  • matlab precision determinant problem

    - by ldigas
    I have the following program format compact; format short g; clear; clc; L = 140; J = 77; Jm = 10540; G = 0.8*10^8; d = L/3; for i=1:500000 omegan=1.+0.0001*i; a(1,1) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(1,2) = 2; a(1,3) = 0; a(1,4) = 0; a(2,1) = 1; a(2,2) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(2,3) = 1; a(2,4) = 0; a(3,1) = 0; a(3,2) = 1; a(3,3) = ((omegan^2)*(Jm/(G*J))*d^2)-2; a(3,4) = 1; a(4,1) = 0; a(4,2) = 0; a(4,3) = 2; a(4,4) = ((omegan^2)*(Jm/(G*J))*d^2)-2; if(abs(det(a))<1E-10) sprintf('omegan= %8.3f det= %8.3f',omegan,det(a)) end end Analytical solution of the above system, and the same program written in fortran gives out values of omegan equal to 16.3818 and 32.7636 (fortran values; analytical differ a little, but they're there somewhere). So, now I'm wondering ... where am I going wrong with this ? Why is matlab not giving the expected results ? (this is probably something terribly simple, but it's giving me headaches)

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  • C# - parse content away from structure in a binary file

    - by Jeff Godfrey
    Using C#, I need to read a packed binary file created using FORTRAN. The file is stored in an "Unformatted Sequential" format as described here (about half-way down the page in the "Unformatted Sequential Files" section): http://www.tacc.utexas.edu/services/userguides/intel8/fc/f_ug1/pggfmsp.htm As you can see from the URL, the file is organized into "chunks" of 130 bytes or less and includes 2 length bytes (inserted by the FORTRAN compiler) surrounding each chunk. So, I need to find an efficient way to parse the actual file payload away from the compiler-inserted formatting. Once I've extracted the actual payload from the file, I'll then need to parse it up into its varying data types. That'll be the next exercise. My first thoughts are to slurp up the entire file into a byte array using File.ReadAllBytes. Then, just iterate through the bytes, skipping the formatting and transferring the actual data to a second byte array. In the end, that second byte array should contain the actual file contents minus all the formatting, which I'd then need to go back through to get what I need. As I'm fairly new to C#, I thought there might be a better, more accepted way of tackling this. Also, in case it's helpful, these files could be fairly large (say 30MB), though most will be much smaller...

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  • parse content away from structure in a binary file

    - by Jeff Godfrey
    Using C#, I need to read a packed binary file created using FORTRAN. The file is stored in an "Unformatted Sequential" format as described here (about half-way down the page in the "Unformatted Sequential Files" section): http://www.tacc.utexas.edu/services/userguides/intel8/fc/f_ug1/pggfmsp.htm As you can see from the URL, the file is organized into "chunks" of 130 bytes or less and includes 2 length bytes (inserted by the FORTRAN compiler) surrounding each chunk. So, I need to find an efficient way to parse the actual file payload away from the compiler-inserted formatting. Once I've extracted the actual payload from the file, I'll then need to parse it up into its varying data types. That'll be the next exercise. My first thoughts are to slurp up the entire file into a byte array using File.ReadAllBytes. Then, just iterate through the bytes, skipping the formatting and transferring the actual data to a second byte array. In the end, that second byte array should contain the actual file contents minus all the formatting, which I'd then need to go back through to get what I need. As I'm fairly new to C#, I thought there might be a better, more accepted way of tackling this. Also, in case it's helpful, these files could be fairly large (say 30MB), though most will be much smaller...

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  • Rule of thumb for capitalizing the letters in a programming language

    - by William
    I was wondering if anyone knew why some programming languages that I see most frequently spelled in all caps (like an acronym), are also commonly written in lower case. FORTRAN, LISP, and COBOL come to mind but I'm sure there are many more. Perhaps there isn't any reason for this, but I'm curious to know if any of these changes are due to standards or decisions by their respective communities. Or are people just getting too lazy to hit the caps lock key? (I know I am)

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  • openmp program elapsed time not scaling with increased threads

    - by Griff
    I've got this openmp fortran program doing an embarrassingly parallel problem - do loop over 512^3 elements. See output below. Why would there be such strange behavior in the elapsed time as a function of threads? I thought it would peak at a sweet spot then slowly degrade. This clearly isn't happening. Perhaps I misunderstand something about openmp. Threads, omp_get_wtime 1, 103.76298500015400 2, 65.346454000100493 4, 45.923643999965861 7, 38.074195000110194 8, 36.968765000114217 9, 39.45981499995105 10,40.753379000118002 12,39.577559999888763 14,37.909950000001118

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  • how to run g95 executable files in OS X terminal

    - by lollygagger
    I am completely new to this game, so please be gentle ;-) I made an example program in Fortran 90, lets call it 'program.f90'. I compile it: g95 program.f90 It creates an executable called a.out How do I run this? It is supposed to print something to the screen, and get input from me, but I cannot figure out how to!

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  • C/C++ opaque pointer library

    - by aaa
    hello Is there library/header already written to manage C++ objects from C using opaque pointers/handles? I can write one myself, but I would rather use already made solution, especially if it has fortran bindings. Thanks

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  • Debugging fortran code in Eclipse with Photran and GDB debugger: missing symbols

    - by tvandenbrande
    I have a program, written in fortran90, previously successfully compiled on a compaq compiler and working, that I'm now trying to compile with gfortran. I can compile the code to an .exe and run it. It works fine until a certain point in the routine and then an error is thrown. My current configuration: Windows 7 Eclipse Juno with CDT Photran Cygwin installation with gfortran compiler and GDB debugger (gdb.exe) Configurations for the debugger: GDB command set: Standard (Windows) Protocol: mi Shared libraries: don't load shared library symbols automatically (when activating this, no changes are noted). When running the debug command I get the following output: .gdbinit: No such file or directory. Reading symbols from /cygdrive/c/Users/thys/Documents/doctoraat/12_in progress/Hamfem/Debug/Hamfem.exe...done. auto-solib-add on Undefined command: "auto-solib-add". Try "help". Warning: C:/Users/thys/Documents/doctoraat/12_in progress/Hamfem/Hamfem/in: No such file or directory. [New Thread 5816.0x1914] [New Thread 5816.0x654] Basicly that leaves me with 2 questions: Where can I find the .gdbinit file in the cygwin installation? Are there any other possible errors in my setup, or points to think about?

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  • Dependency Walker Not Showing All the Depended Dll

    - by Ngu Soon Hui
    I have a fortran dll, and I want to know the assemblies that it depends on for redistribution purpose. One thing I found out is that the dependency walker doesn't show all of the dependencies, i.e, there are some dlls that my assembly is dependent on, but dependency walker doesn't show it out. An example would be a dll that makes use of intel mkl LAPACK dlls, but the dependency walker doesn't show that dependency. Why this is so? And any idea how to fix this problem, or is there other more reliable tool that I can use?

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  • An error which does not present itself with a debugger attached.

    - by ccook
    I am using Intel's FORTRAN compiler to compile a numerical library. The test case provided errors out within libc.so.6. When I attach Intel's debugger (IDB) the application runs through successfully. How do I debug a bug where the debugger prevents the bug? Note that the same bug arose with gfortran. I am working within OpenSUSE 11.2 x64. The error is: forrtl: severe (408): fort: (3): Subscript #1 of the array B has value -534829264 which is less than the lower bound of 1

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  • Why will this code compile using ifort compiler and not when using gfortran compiler? Help!

    - by CuriousCompiler
    I'm rewriting some code to make a program compile with the gfortran compiler as opposed to ifort compiler I usually use. The code follows: _Subroutine SlideBits (WORD, BITS, ADDR) Implicit None Integer(4) WORD Integer(4) BITS Integer(4) ADDR Integer(4) ADDR1 ADDR1 = 32 - ADDR WORD = (WORD .And. (.Not.ISHFT(1,ADDR1))) .Or. ISHFT(BITS,ADDR1) End_ When I compile the above code using the gfortran compiler, I recieve this error: WORD = (WORD .And. (.Not.ISHFT(1,ADDR1))) .Or. ISHFT(BITS,ADDR1) Error: Operand of .NOT. operator at (1) is INTEGER(4) All three of the variables coming into the subroutine are integers. I've looked around a bit and the gfortran wiki states that the gfortran compiler should be able to handle logical statments being applied to integer values. Several other sites I've visited either quote from the gnu wiki or agree with it. This is the first time I've seen this error as the Intel Fortran compiler (ifort) I normally use compiles cleanly.

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  • Essential Training Topics for Supervisors of ASP.NET Developers

    - by Dave Johnson
    I have a co-worker who supervises a group of ASP.NET developers who are doing lots of ASP.NET/SQL Server apps. My co-worker was very technical at one time, but his last programming assignment was writing Fortran code in the 1980s. He has asked me to help him gain a deeper knowledge of ASP.NET Web application development to equip him in his supervisory role. I will be spending an hour every other week with him providing training, and he will probably not have a lot of time to commit otherwise. What would you recommend as topics to cover, tutorial resources, etc. so that I can help him get up to speed in his role as a supervisor of ASP.NET developers?

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  • catching a deadlock in a simple odd-even sending

    - by user562264
    I'm trying to solve a simple problem with MPI, my implementation is MPICH2 and my code is in fortran. I have used the blocking send and receive, the idea is so simple but when I run it it crashes!!! I have absolutely no idea what is wrong? can anyone make quote on this issue please? there is a piece of the code: integer,parameter::IM=100,JM=100 REAL,ALLOCATABLE ::T(:,:),TF(:,:) CALL MPI_COMM_RANK(MPI_COMM_WORLD,RNK,IERR) CALL MPI_COMM_SIZE(MPI_COMM_WORLD,SIZ,IERR) prv = rnk-1 nxt = rnk+1 LIM = INT(IM/SIZ) IF (rnk==0) THEN ALLOCATE(TF(IM,JM)) prv = MPI_PROC_NULL ELSEIF(rnk==siz-1) THEN NXT = MPI_PROC_NULL LIM = LIM+MOD(IM,SIZ) END IF IF (MOD(RNK,2)==0) THEN CALL MPI_SEND(T(2,:),JM+2,MPI_REAL,PRV,10,MPI_COMM_WORLD,IERR) CALL MPI_RECV(T(1,:),JM+2,MPI_REAL,PRV,20,MPI_COMM_WORLD,STAT,IERR) ELSE CALL MPI_RECV(T(LIM+2,:),JM+2,MPI_REAL,NXT,10,MPI_COMM_WORLD,STAT,IERR) CALL MPI_SEND(T(LIM+1,:),JM+2,MPI_REAL,NXT,20,MPI_COMM_WORLD,IERR) END IF as I understood even processes are not receiving anything while the odd ones finish sending successfully, in some cases when I added some print to observe what is going on I saw that the variable NXT is changing during the sending procedure!!! for example all the odd process was sending message to process 0 not their next one!

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  • undefined references

    - by Brandon
    Hello, I'm trying to compile some fortran code and I'm running into some confusing linking errors. I have some code that I compile and place into a static library: >gfortran -c -I../../inc -o bdout.o bdout.F >ar rv libgeo.a bdout.o I then try to compile against that library with some simple test code and get the following: >gfortran -o mytest -L -lgeo mytest.F /tmp/cc4uvcsj.o: In function `MAIN__': mytest.F:(.text+0xb0): undefined reference to `ncwrite1_' collect2: ld returned 1 exit status It's not in the object naming because everything looks fine: >nm -u libgeo.a bdout.o: U _gfortran_exit_i4 U _gfortran_st_write U _gfortran_st_write_done U _gfortran_transfer_character U _gfortran_transfer_integer U ncobjcl_ U ncobjwrp_ U ncopencr_ U ncopenshcr_ U ncopenwr_ U ncwrite1_ U ncwrite2_ U ncwrite3_ U ncwrite4_ U ncwritev_ I can check the original object file too: >nm -u bdout.o U _gfortran_exit_i4 U _gfortran_st_write U _gfortran_st_write_done U _gfortran_transfer_character U _gfortran_transfer_integer U ncobjcl_ U ncobjwrp_ U ncopencr_ U ncopenshcr_ U ncopenwr_ U ncwrite1_ U ncwrite2_ U ncwrite3_ U ncwrite4_ U ncwritev_ The test code simply contains a single call to a function defined in bdout.o: program hello print *,"Hello World!" call ncwrite1( istat, f, ix2, ix3, ix4, ix5, ih ) end program hello I can't figure out what the problem is. Does anyone have any suggestions? Maybe even just a way to track the problem down? Cheers.

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  • How to implement Horner's scheme for multivariate polynomials?

    - by gsreynolds
    Background I need to solve polynomials in multiple variables using Horner's scheme in Fortran90/95. The main reason for doing this is the increased efficiency and accuracy that occurs when using Horner's scheme to evaluate polynomials. I currently have an implementation of Horner's scheme for univariate/single variable polynomials. However, developing a function to evaluate multivariate polynomials using Horner's scheme is proving to be beyond me. An example bivariate polynomial would be: 12x^2y^2+8x^2y+6xy^2+4xy+2x+2y which would factorised to x(x(y(12y+8))+y(6y+4)+2)+2y and then evaluated for particular values of x & y. Research I've done my research and found a number of papers such as: staff.ustc.edu.cn/~xinmao/ISSAC05/pages/bulletins/articles/147/hornercorrected.pdf citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.40.8637&rep=rep1&type=pdf www.is.titech.ac.jp/~kojima/articles/B-433.pdf Problem However, I'm not a mathematician or computer scientist, so I'm having trouble with the mathematics used to convey the algorithms and ideas. As far as I can tell the basic strategy is to turn a multivariate polynomial into separate univariate polynomials and compute it that way. Can anyone help me? If anyone could help me turn the algorithms into pseudo-code that I can implement into Fortran myself, I would be very grateful.

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  • Tools for Automated Source Code Editing

    - by Steve
    I'm working on a research project to automatically modify code to include advanced mathematical concepts (like adding random effects into a loop or encapsulating an existing function with a new function that adds in a more advanced physical model). My question to the community is: are there are any good tools for manipulating source code directly? I want to do things like Swap out functions Add variable declarations wherever they are required Determine if a function is multiplied by anything Determine what functions are called on a line of code See what parameters are passed to a function and replace them with alternatives Introduce new function calls on certain lines of code Wherever possible just leaving the rest of the code untouched and write out the results I never want to actually compile the code I only want to understand what symbols are used, replace and add in a syntactically correct way, and be able to declare variables at the right position. I've been using a minimal flex/bison approach with some success but I do not feel the it is robust. I hate to take on writing a full language parser just to add some new info to the end of a line or the top of a function. It seems like this is almost what is going to be required but it also seems like there should be some tools out there to do these types of manipulations already. The code to be changed is in a variety of languages, but I'm particularly interested in FORTRAN. Any thoughts?

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