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  • Is it possible to use a back reference to specify the number of replications in a regular expression

    - by user307894
    Is it possible to use a back reference to specify the number of replications in a regular expression? foo= 'ADCKAL+2AG.+2AG.+2AG.+2AGGG+.+G+3AGGa4.' The substrings that start with '+[0-9]' followed by '[A-z]{n}.' need to be replaced with simply '+' where the variable n is the digit from earlier in the substring. Can that n be back referenced? For example (doesn't work) '+([0-9])[A-z]{/1}.' is the pattern I want replaced with "+" (that last dot can be any character and represents a quality score) so that foo should come out to ADCKAL++++G.G+. foo = 'ADCKAL+2AG.+2AG.+2AG.+2AGGG^+.+G+3AGGa4.' indelpatt = re.compile('\+([0-9])') while indelpatt.search(foo): indelsize=int(indelpatt.search(foo).group(1)) new_regex = '\+%s[ACGTNacgtn]{%s}.' % (indelsize,indelsize) newpatt=re.compile(new_regex) foo = newpatt.sub("+", foo) I'm probably missing an easier way to parse the string.

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  • Debugging (displaying) SQL command sent to the db by SQLAlchemy

    - by morpheous
    I have an ORM class called Person, which wraps around a person table: After setting up the connection to the db etc, I run the ff statement. people = session.query(Person).all() The person table does not contain any data (as yet), so when I print the variable people, I get an empty list. I renamed the table referred to in my ORM class People, to people_foo (which does not exist). I then run the script again. I was surprised that no exception was thrown when attempting to access a table that does not exist. I therefore have the following 2 questions: How may I setup SQLAlchemy so that it propagates db errors back to the script? How may I view (i.e. print) the SQL that is being sent to the db engine If it helps, I am using PostgreSQL as the db

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  • GAE and Django: What are the benefits?

    - by RHicke
    Currently I have a website on the Google App Engine written in Google's webapp framework. What I want to know is what are the benefits of converting my app to run with django? And what are the downsides? Also how did you guys code your GAE apps? Did you use webapp or django? Or did you go an entirely different route and use the Java api? Thanks

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  • Class views in Django

    - by Sebastjan Trepca
    Django view points to a function, which can be a problem if you want to change only a bit of functionality. Yes, I could have million keyword arguments and even more if statements in the function, but I was thinking more of an object oriented approach. For example, I have a page that displays a user. This page is very similar to page that displays a group, but it's still not so similar to just use another data model. Group also has members etc... One way would be to point views to class methods and then extend that class. Has anyone tried this approach or has any other idea?

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  • Django database - how to add this column in raw SQL.

    - by alex
    Suppose I have my models set up already. class books(models.Model): title = models.CharField... ISBN = models.Integer... What if I want to add this column to my table? user = models.ForeignKey(User, unique=True) How would I write the raw SQL in my database so that this column works?

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  • Converting Numpy Lstsq residual value to R^2

    - by whatnick
    I am performing a least squares regression as below (univariate). I would like to express the significance of the result in terms of R^2. Numpy returns a value of unscaled residual, what would be a sensible way of normalizing this. field_clean,back_clean = rid_zeros(backscatter,field_data) num_vals = len(field_clean) x = field_clean[:,row:row+1] y = 10*log10(back_clean) A = hstack([x, ones((num_vals,1))]) soln = lstsq(A, y ) m, c = soln [0] residues = soln [1] print residues

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  • [SOLVED]Django - Passing variables to template based on db

    - by George 'Griffin
    I am trying to add a feature to my app that would allow me to enable/disable the "Call Me" button based on whether or not I am at [home|the office]. I created a model in the database called setting, it looks like this: class setting(models.Model): key = models.CharField(max_length=200) value = models.CharField(max_length=200) Pretty simple. There is currently one row, available, the value of it is the string True. I want to be able to transparently pass variables to the templates like this: {% if available %} <!-- Display button --> {% else %} <!-- Display grayed out button --> {% endif %} Now, I could add logic to every view that would check the database, and pass the variable to the template, but I am trying to stay DRY. What is the best way to do this? UPDATE I created a context processor, and added it's path to the TEMPLATE_CONTEXT_PROCESSORS, but it is not being passed to the template def available(request): available = Setting.objects.get(key="available") if open.value == "True": return {"available":True} else: return {} UPDATE TWO If you are using the shortcut render_to_response, you need to pass an instance of RequestContext to the function. from the django documentation: If you're using Django's render_to_response() shortcut to populate a template with the contents of a dictionary, your template will be passed a Context instance by default (not a RequestContext). To use a RequestContext in your template rendering, pass an optional third argument to render_to_response(): a RequestContext instance. Your code might look like this: def some_view(request): # ... return render_to_response('my_template.html', my_data_dictionary, context_instance=RequestContext(request)) Many thanks for all the help!

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  • How to verify object creation in Django ?

    - by Martin
    So.. this never crossed my head before but now I just can't figure out how to do that !! I want to verify that the object I created was really created, and return True or False according to that : obj = object(name='plop') try: obj.save() return True except ???: return False Any idea ? Cheers, -M

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  • twitter api post rate limit

    - by Xavier
    Does anyone know Twitter's rate limit on posting? Looking at their web page they claimed to not have one but I get an exception thrown if my program posts too fast... Any help is appreciated.

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  • what is the 'extra' mean in this django code..

    - by zjm1126
    TOPIC_COUNT_SQL = """ SELECT COUNT(*) FROM topics_topic WHERE topics_topic.object_id = maps_map.id AND topics_topic.content_type_id = %s """ MEMBER_COUNT_SQL = """ SELECT COUNT(*) FROM maps_map_members WHERE maps_map_members.map_id = maps_map.id """ maps = maps.extra(select=SortedDict([ ('member_count', MEMBER_COUNT_SQL), ('topic_count', TOPIC_COUNT_SQL), ]), select_params=(content_type.id,)) i don't know this mean, thanks

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  • sqlalchemy natural sorting

    - by teggy
    Currently, i am querying with this code: meta.Session.query(Label).order_by(Label.name).all() and it returns me objects sorted by Label.name in this manner ['1','7','1a','5c']. Is there a way i can have the objects returned in the order with their Label.name sorted like this ['1','1a','5c','7'] Thanks!

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  • directory and file related doubts??

    - by kaushik
    i have a directory with around 1000 files....i want to run a same code for each of these file... my code requires the file name to be inputted. i have written code to copy the information of one into other in other format... please suggest a method to copy all 1000 files one by one without need to change the file name every time and i have a field serial_num which need to be continous i.e if 1st file has upto 30 then while coping other file it should continue from 30not from 0 again require suggestion please thanks..

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  • HTML5 video element non-seekable when using Django development server

    - by Ory Band
    Hey everyone. I've got a Django app serving a webpage with an HTML5 element. There's a wierd "feature", turning the video element to be non-seekable: video.seekable returns a timeRanges object with length=0, whereas it should be length=1. This means I can't edit the video. JavaScript can't do anything either. The thing is, when I upload the problematic webpage, statically - no Django, just plain HTML/JS/CSS - to my website for testing, it works fine - length=1. However, if I try to serve the same static page on my Django dev server still gives the same problem. I am using Django's static serving for dev/debug purposes - Do you have any idea what is causing this, or how can I fix it? Thanks.

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  • Dynamically customize django admin columns ?

    - by tomjerry
    Is it possible to let the users choose / change dynamically the columns displayed in a object list in Django administration ? Things can surely be implemented "from scratch" by modifying the 'change_list.html' template but I was wondering if somebody has already had the same problem and/or if any django-pluggin can do that. Thanks in advance,

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  • Number guessing game (3+- guessed result)

    - by Nick Waring
    I've been assigned a task to create a game that generates 4 digits and the user has to guess the digits one at a time to get the correct result. If the number is correct a Y is displayed and if not, a N. This was easy, now the next step was to implement another two responses. If the answer is too high, a H is displayed and too low, an N. Again, was easy - now the third is to use the same design as game 2 but if the number is 3 higher than a H is displayed and same if it's 3 lower than a L is displayed - otherwise an X is displayed. I can't figure out how to do this. Here's my test code for game 2 for just one of the digits - any help is appreciated. (5 was used just for a test.) def guess(): x = 5 g= int(input("Guess the number: ")) if g == x: print("Y") elif g < x: print("L") else: print("H")

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  • SqlAlchemy hangs after adding record in MS SQL

    - by Patrick
    I'm running SQLAlchemy on Jython and trying to connect to a MS SQL database using jTDS with windows authentication. I can query and delete just fine but when I try to insert new values it will hang when I commit. int 'before add' session.add(newVal) print 'after add' session.commit() print 'after commit' I see the first two print statements but not the last. My CPU maxes out and I can't even query the table directly using the MS SQL Management Studio. When I kill the Jython java process I can query again but the new values haven't been added. Strangely enough I can insert values directly using an SQL command: insert_sql = "INSERT INTO my_table (my_value) VALUES ('test_value')" session.execute(insert_sql) session.commit() Any ideas what I'm doing wrong?

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  • Convert octet string to human readable

    - by Michael Lang
    Using the pysnmp framework i get some values doing a snmp walk. Unfortunately for the oid 1.3.6.1.21.69.1.5.8.1.2 (DOCS-CABLE-DEVICE-MIB) i get a weird result which i cant correctly print here since it contains ascii chars like BEL ACK When doing a repr i get: OctetString('\x07\xd8\t\x17\x03\x184\x00') But the output should look like: 2008-9-23,3:24:52.0 the format is called "DateAndTime". How can i translate the OctetString output to a "human readable" date/time ?

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  • Object directing to a property when accessed as an iterable

    - by ThE_JacO
    I'm trying to figure out if there's an elegant and concise way to have a class accessing one of its own properties when "used" as a dictionary, basically redirecting all the methods that'd be implemented in an ordered dictionary to one of its properties. Currently I'm inheriting from IterableUserDict and explicitly setting its data to another property, and it seems to be working, but I know that UserDict is considered sort of old, and I'm concerned I might be overlooking something. What I have: class ConnectionInterface(IterableUserDict): def __init__(self, hostObject): self._hostObject= hostObject self.ports= odict.OrderedDict() self.inputPorts= odict.OrderedDict() self.outputPorts= odict.OrderedDict() self.data= self.ports This way I expect the object to behave and respond (and be used) the way I mean it to, except I want to get a freebie ordered dictionary behaviour on its property "ports" when it's iterated, items are gotten by key, something is looked up ala if this in myObject, and so on. Any advice welcome, the above seems to be working fine, but I have an odd itch that I might be missing something. Thanks in advance.

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