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  • mysql disk io keeps increasing ... is that normal?

    - by trustfundbaby
    So I've been trying to figure out this disk IO problem I have been having with my linode VPS. Over the last day or two I've just left watch -n1 pidstat -d running in a console window and the output looks like this: Monitoring it over the last few days, I've noticed that my problem lies with the init, searchd, and mysql processes. Searchd is sphinx and all its indexes are on disk, so disk io there is inevitable (apparently). What I can't understand is why the disk reads (kB_rd/s) for mysql refuse to stabilize and just keep going up. It started out at 154 yesterday and is up to what you see in that screen shot. but disk writes (kB_wr/s) have remained pretty constant the entire time. My VPS only has 768MB RAM, my mysql db has a size of about 220MB and after running mysqltuner.pl and reading a bit about it, I've been advised to set my innodb_buffer_pool_size to 220MB but I simply cannot afford to do that ... I have it up to 150MB. My question is twofold. Why does the init process have that much disk reading to do? Why is mysql doing so much disk reading?

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  • mdadm raid1 fails to resync

    - by JuanD
    Hello, I'm trying to solve this problem I'm having with an mdadm raid1. I have an ubuntu 9.04 server running on a software 2-drive raid1 with mdadm. Yesterday, one of the drives failed, and so I replaced it with a brand new drive of the same size. I removed the faulty drive, copied the partition from the remaining good drive to the new drive and then added it to the raid. It re-synced and the system worked fine, until the drive that hadn't failed, was also labeled failed. Now I had the raid running solely on the new drive. So I purchased another drive and repeated the procedure above. So now I had 2 brand new drives and the raid was syncing. However, after a few minutes I checked /proc/mdstat and the raid was no longer syncing. mdadm --detail /dev/md1 shows: (sdb is the first new drive, and sdc is the second new drive) root@dola:/home/jjaramillo# mdadm --detail /dev/md1 /dev/md1: Version : 00.90 Creation Time : Sat Dec 20 00:42:05 2008 Raid Level : raid1 Array Size : 974711680 (929.56 GiB 998.10 GB) Used Dev Size : 974711680 (929.56 GiB 998.10 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 1 Persistence : Superblock is persistent Update Time : Wed Jun 2 10:09:35 2010 State : clean, degraded Active Devices : 1 Working Devices : 2 Failed Devices : 0 Spare Devices : 1 UUID : bba497c6:5029ba0b:bfa4f887:c0dc8f3d Events : 0.5395594 Number Major Minor RaidDevice State 2 8 35 0 spare rebuilding /dev/sdc3 1 8 19 1 active sync /dev/sdb3 I've tried removing and re-adding the drive a few times, but the same thing happens. The raid fails to resync. I've looked at /var/log/messages, and found the following: Jun 2 07:57:36 dola kernel: [35708.917337] sd 5:0:0:0: [sdb] Unhandled sense code Jun 2 07:57:36 dola kernel: [35708.917339] sd 5:0:0:0: [sdb] Result: hostbyte=DID_OK driverbyte=DRIVER_SENSE Jun 2 07:57:36 dola kernel: [35708.917342] sd 5:0:0:0: [sdb] Sense Key : Medium Error [current] [descriptor] Jun 2 07:57:36 dola kernel: [35708.917346] Descriptor sense data with sense descriptors (in hex): Jun 2 07:57:36 dola kernel: [35708.917348] 72 03 11 04 00 00 00 0c 00 0a 80 00 00 00 00 00 Jun 2 07:57:36 dola kernel: [35708.917357] 00 43 9e 47 Jun 2 07:57:36 dola kernel: [35708.917360] sd 5:0:0:0: [sdb] Add. Sense: Unrecovered read error - auto reallocate failed So it looks like there's some kind of error on sdb (the first new drive). My question is, what would be the best approach to get the raid up and running again? I've thought about dd'ing the /dev/md1 to a blank hard drive, then re-doing the raid from scratch and loading the data back, but there could be an easier solution.. Any help would be appreciated.

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  • Running a service as root

    - by kovica
    I have a java program that I use to automate the process of creating VPN settings for clients. The program calls couple of bash scripts, create and copies files around. I have to run it under root user because the whole VPN config is under /etc/openvpn. For this directory I need root privileges. On the same machine I have Glassfish application server and it will call the mentioned Java program. Glassfish is run under non-root user. What is the best, most secure way of running a program as a root user of course without entering a password if I run it via sudo?

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  • Started an application through SSH, command line now gone, what happens next?

    - by Chris Dutrow
    Context: This is a very basic question Using Putty and SSH for the first time to do some serious server setup and run into the situation where I have started a process that I do not want to stop. The process is the gunicorn WSGI HTTP Server (running on Centos 6.3). The command I used to start the process is (as per their Quick Start): gunicorn -w 4 myapp:app At this point in the work session, I have lost the command prompt. This must be such a non-issue that it doesn't even enter into an experienced user's consciousness. But unfortunately at my level of experience, I am left with several fundamental questions: Does the fact that I have lost the command prompt mean that the process is still running? How do I get back to the command prompt without killing the process? How do I come back and monitor the process later? How do I eventually kill the process? Any help is appreciated, thanks so much!

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  • Automate hashing for each file in a folder?

    - by Kennie R.
    I have quite a few FTP folders, and I add a few each month and prefer to leave some sort of method of verifying their integrity, for example the files MD5SUMS, SHA256SUMS, ... which I could create using a script. Take for example: find ./ -type f -exec md5sum $1 {} \; This works fine, but when I run it each time for each shaxxx sum afterwards, it creates a sum of the MD5SUMs file which is really not wanted. Is there a simpler way, or script, or common way of hashing all the files in to their sums file without causing problems like that? I could really use a better option.

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  • Port forwarding using IP Tables

    - by Darider
    I have a server with a LAN facing address of 192.168.5.100 (eth0) and another LAN facing address of 192.168.6.6 (eth1). On this server I have a Virtualbox instance of fedora running an apache webserver (on port 8080) with a bridged interface to eth1 on the host server with address of 192.168.6.7 Users on the 192.168.6.x network can access the Webserver on the Vbox instance (192.168.6.7) with no problems. My question is what kind of iptables entries or commands should be made/executed so as to allow for users on the 192.168.5.x network to access the webserver on the vbox instance. (I'm hoping their url can be something like: http://192.168.5.100:8080)

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  • Ask filesystem if it is mounted

    - by Brian
    How can I see if a (ext3) filesystem is mounted by asking the filesystem directly (i.e. the same way that the system does when it boots and sees that it was not unmounted cleanly)? Checking the output of mount is no good because the filesystem might be mounted by a virtual machine. I know I can run fsck and it will abort if the filesystem is mounted, but I don't need to actually check the filesystem.

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  • difference between success and failed event in auditd/aureport

    - by user112358132134
    The aureport command has two options that limit the list of displayed events to those that were successful and those that failed. Per the man page: --failed Only select failed events for processing in the reports. The default is both success and failed events. --success Only select successful events for processing in the reports. The default is both success and failed events. What does this mean? Is the failure/success with regard to the actual event (e.g., a syscall that returned non-zero) or does the failure/success apply to auditd and whether or not there was an issue in processing the event?

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  • Why doesn't the value in /proc/meminfo seem to map exactly to the system RAM?

    - by Eric Asberry
    The values in /proc/meminfo for MemTotal don't make sense. As a human, eyeballing it, it seems to roughly correspond to the installed RAM, but for using it to display the installed RAM from an automated utility it appears to be inexact, and inconsistent. For a system with 1G of RAM, I would expect the MemTotal line to have a value of 1048576 - 1024*1024. But instead, I'm seeing 1029392. On another 4G box, I'm seeing 3870172, which is not a multiple of 1024, and it's not even close to 1029392*4. On an 8G box, I get 8128204, which again seems to have no correlation to the other values, nor is it a multiple of 1024. I'm trying to use this information to report the RAM on a status web page. My work-around is to just "round" it to the nearest 1G multiple, but I'd like to understand why these values seem inconsistent and don't match my expectations. Can somebody fill me in on what I'm missing here? EDIT: To expand on the accepted answer below.... The reference can be found here. Also of interest to me from that page, which explains the inconsistency, is this bit: meminfo: Provides information about distribution and utilization of memory. This varies by architecture and compile options. ...

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  • Debian - Problems Unmounting External Hard Drives

    - by user331981
    I recently installed Debian Testing on a new laptop and I just noticed that I am having some issues with unmounting external hard drives. I am using Mate Desktop 1.8.1. With the 1st drive, if I right click on the drive and select “safely remove”: The drive unmounts, spins down, immediately spins back up an remounts. Unable to unmount. With the 2nd drive, if I right click on the drive and select “safely remove”: The drive unmounts but does not spin down. With the 3rd drive, if I right click on the drive and select “safely remove”: The drive unmounts but does not spin down, immediately spins back up but does not remount, and after 20 seconds, it spins down and stays that way. Behavior is the same on both USB 2.0 and USB 3.0 ports. On my last laptop, on which I also used Debian Testing + Mate desktop, the safe removal of drives worked out of the box and I never had an issue with it. The drives would unmount, spin down and stay that way. To remount the drive, one needed to unplug the device and plug it back in. I am unsure how to troubleshoot this issue and I am not sure if it is merely a matter of installing a “missing” package of editing a config file. Thank you in advance.

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  • Access denied for user 'root@localhost' (using password:NO)

    - by murgatroid99
    I am attempting to install a network management package called cacti onto Ubuntu running under Windows Virtual PC. I attempted to install MySQL as it is one of cacti's dependencies. I can install and start the MySQL server, but whenever I try to access it in any other way, such as to change the password, I get the error message Access denied for user 'root@localhost' (using password:NO). I would like to know what is causing this and how to fix it. Edit: (just in case my comments are not visible) The answers from HD and Devin Ceartas did not work for me.

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  • Should we regularly schedule mysqlcheck (or databsae optimization)

    - by scatteredbomb
    We run a forum with some 2 million posts and I've noticed that if left untouched the overhead in the mySQL (as listed in phpMyAdmin) can get quite large (hundreds of megabytes). I'm wondering if scheduling a normal mysqlcheck to optimize the tables is good practice? Any reason not to do it, say, once a week at an off-peak hour? There was a time over the summer where our site was constantly crashing because mysql was using up all resources. That's when I noticed the huge amount of overhead and optimized the database and haven't had any problems since then with stability. I figured if that was helping alleviate the issues, I should just setup a cron to automatically do this.

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  • Apache HTTP Not Working When SSL Enabled

    - by dominic7il
    I've got a very bizarre problem in that after enabling SSL support in Apache I'm only able to access my site via SSL and not through http as well. I can confirm that Apache is definitely listening on both ports 80 and 443 (accdording to netstat). Additionally the Apache access logs are showing the requests - it's just that going in through http results in a timeout and I'm never actually able to reach the content. Like I said going through https works. Here is my httpd.conf: http://pastebin.com/kG2dPjJ2 and here is my httpd-ssl.conf: http://pastebin.com/thqvjgGJ Can anyone spot any issues with those configurations? or Have any suggestion at all? I've searched and searched but there appear to be very few people who have experienced the same. Also worth mentioning that I did a comparision between those configurations and those of a working set up and I couldn't spot anything.

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  • I've two swap partitions, how can i delete one?

    - by Gp2mv3
    I've installed Ubuntu on my computer but I did a mistake during the installation and it created two swap's. In fact I had tree partitions (system, home, swap) but the installator crashed so I restarted the installation and it has installed everything in the system partition. So now I separated the home in the appropriate partition but I've two swap partitions. How can I delete one ? If I delete one, how will it go ?

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  • How to copy a file to a remote server using the command line?

    - by cool_cs
    I am trying to copy a file from my desktop to my remote server using the sudo command. I am doing this from the remote machine since I know the password for this machine and I do not have a password for my local machine. sudo scp donj@localhost:/Desktop/my.cnf user@remotemachine:/app/MySQL/my.cnf This does not work however. I want to overwrite the my.cnf file in the MySQL directory. I tried the su command but I do not have the password to become a super user.

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  • Free web gallery installation that can use existing directory hierarchy in filesystem?

    - by user1338062
    There are several different free software gallery projects (Gallery, Coppermine, etc), but as far as I know each of those creates a copy of imported images in their internal storage, be it directory structure or database). Is there any gallery software that would allow keeping existing directory hierarchy of media files (images, videos), as-is, and just store the meta-data of them in a database? I guess at least various NAS solutions ship with software like this.

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  • running commands as other users - best method

    - by linuxrawkstar
    When running commands as other users from the command line, what is recommended best practice? In the past I've used sudo like so: sudo -u username command [args] I've been told (with no specific reasons why) that using sudo for this purpose is wrong. I'd like to know why. Is there some "best way" to accomplish this? For example, I've also used the su command like so: su username - -c "command [args]" I can't imagine why either of these methods would be "bad". Your thoughts?

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  • wget recursive limited within subdomain

    - by Paul Seangwongree
    I want to download the following subdomain with the recursive option using wget: www.example.com/A/B So if that URL has links to www.example.com/A/B/C and www.example.com/A/B/D, these two should also be downloaded. But I don't want anything outside the www.example.com/A/B subdomain to be downloaded. For example, if www.example.com/A/B/C has a link back to www.example.com, the page www.example.com should not be downloaded. What wget command should I use?

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  • Apache downloads php files instead of running their source

    - by Devils Child
    I have just recently upgraded PHP 5.3 to 5.4 on my Debian Squeeze server. Now, instead of executing PHP files, Apache just downloads them, which is really bad. When I try to follow these steps, I get "broken packages" upon installing the libapache2-mod-php5 package. Also the answer tells me to add something to my httpd.conf, but it's empty. Question: How can I make apache execute php files again, instead of just passing them through as download? dpkg -l | grep php returns this rc libapache2-mod-php5 5.3.3-7+squeeze15 server-side, HTML-embedded scripting language (Apache 2 module) rc php5-cli 5.3.3-7+squeeze15 command-line interpreter for the php5 scripting language ii php5-common 5.4.15-1~dotdeb.2 Common files for packages built from the php5 source rc php5-gd 5.3.3-7+squeeze15 GD module for php5 rc php5-mcrypt 5.3.3-7+squeeze15 MCrypt module for php5 rc php5-mysql 5.3.3-7+squeeze15 MySQL module for php5 rc php5-suhosin 0.9.32.1-1 advanced protection module for php5 rc phpmyadmin 4:3.3.7-7 MySQL web administration tool And apt-get install libapache2-mod-php5 produces this error The following packages have unmet dependencies: libapache2-mod-php5 : Depends: libdb5.1 but it is not installable Depends: libssl1.0.0 (>= 1.0.0) but it is not installable Depends: libxml2 (>= 2.8.0) but 2.7.8.dfsg-2+squeeze7 is to be installed Recommends: php5-cli but it is not going to be installed E: Broken packages

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  • What means empty iptables?

    - by Memochipan
    I'm using CentOS and when type the command: iptables -L -v The output is as follows: Chain INPUT (policy ACCEPT 19614 packets, 2312K bytes) pkts bytes target prot opt in out source destination Chain FORWARD (policy ACCEPT 0 packets, 0 bytes) pkts bytes target prot opt in out source destination Chain OUTPUT (policy ACCEPT 13881 packets, 32M bytes) pkts bytes target prot opt in out source destination What does this means I'm able to connect using SSH. Where can I see that rule?

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  • What is excessive swapping.

    - by amateur barista
    This post led me to ask that question. Cache contention On a large site, if you are using MyISAM, contention occurs in the database tables when the cache is forced to clear after a node or a comment is added. With tens of thousands of filter text snippets needing to be deleted, the table will be locked for a long period, and any accesses to it will be queued pending the purge of the data in it. The same is true for the page cache as well. This often causes a "site hang" for a minute or two. During that time new requests keep piling up, and if you do not have the MaxClients parameter in Apache setup correctly, the system can go into thrashing because of excessive swapping.

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  • Is there anyway that I can set the 'real' memory usage value while running my java code?

    - by vira
    I'm running a code on a server to generate a 10,000x10,000 matrix and save each value into a table (MySQL). I was informed by the administrator that I can use up to 32g of the physical memory of our server but have no idea how to do it. I googling around and so far only found information about setting the virtual memory using -Xmx. I tried it anyway and using top command I got this: PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 3981 gv 35 15 32.4g 304m 10m S 1 0.5 9:54.84 java So, it shows that the -Xmx set the VIRT and not the RES value. Is there anyway that I can set the RES value into 32g?

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  • Installing multiple versions of a shared library

    - by nsfyn55
    I am running ubuntu 10.04 and I want to use tmux 1.6. tmux has a dependency on libevent 2. My solution was to compile libevent2 and drop into /usr/local/lib then compile tmux against this lib and drop into /usr/local/bin. This works great until...I restart. This is just an assumption on my part but it seems that other binaries are now linking to the libevent2 library presumably because its on the library path. Because there are 60+ packages with libevent1 dependencies this causes my install to basically lose its mind. Is there an idiomatic way to approach running an application that has a core library dependency on a different version? Should I just statically link the lib?

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