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• Can MySQL reasonably perform queries on billions of rows?

  - by haxney

  I am planning on storing scans from a mass spectrometer in a MySQL database and would like to know whether storing and analyzing this amount of data is remotely feasible. I know performance varies wildly depending on the environment, but I'm looking for the rough order of magnitude: will queries take 5 days or 5 milliseconds? Input format Each input file contains a single run of the spectrometer; each run is comprised of a set of scans, and each scan has an ordered array of datapoints. There is a bit of metadata, but the majority of the file is comprised of arrays 32- or 64-bit ints or floats. Host system |----------------+-------------------------------| | OS | Windows 2008 64-bit | | MySQL version | 5.5.24 (x86_64) | | CPU | 2x Xeon E5420 (8 cores total) | | RAM | 8GB | | SSD filesystem | 500 GiB | | HDD RAID | 12 TiB | |----------------+-------------------------------| There are some other services running on the server using negligible processor time. File statistics |------------------+--------------| | number of files | ~16,000 | | total size | 1.3 TiB | | min size | 0 bytes | | max size | 12 GiB | | mean | 800 MiB | | median | 500 MiB | | total datapoints | ~200 billion | |------------------+--------------| The total number of datapoints is a very rough estimate. Proposed schema I'm planning on doing things "right" (i.e. normalizing the data like crazy) and so would have a runs table, a spectra table with a foreign key to runs, and a datapoints table with a foreign key to spectra. The 200 Billion datapoint question I am going to be analyzing across multiple spectra and possibly even multiple runs, resulting in queries which could touch millions of rows. Assuming I index everything properly (which is a topic for another question) and am not trying to shuffle hundreds of MiB across the network, is it remotely plausible for MySQL to handle this? UPDATE: additional info The scan data will be coming from files in the XML-based mzML format. The meat of this format is in the <binaryDataArrayList> elements where the data is stored. Each scan produces = 2 <binaryDataArray> elements which, taken together, form a 2-dimensional (or more) array of the form [[123.456, 234.567, ...], ...]. These data are write-once, so update performance and transaction safety are not concerns. My naïve plan for a database schema is: runs table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | start_time | TIMESTAMP | | name | VARCHAR | |-------------+-------------| spectra table | column name | type | |----------------+-------------| | id | PRIMARY KEY | | name | VARCHAR | | index | INT | | spectrum_type | INT | | representation | INT | | run_id | FOREIGN KEY | |----------------+-------------| datapoints table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | spectrum_id | FOREIGN KEY | | mz | DOUBLE | | num_counts | DOUBLE | | index | INT | |-------------+-------------| Is this reasonable?

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• PHP tag cloud ( and finding similar ones )

  - by mfolnovich

  Hello! I have articles on my site, and I would like to add tags which would describe each article, but I'm having problems with design mysql table for tags. I have two ideas: 1) each article would have field "tags", and tags would be in format: "tag1,tag2,tag3" 2) create other table called tags with fields: tag_name, article_id, so when I want tags for article with ID 1, I would run SELECT ... FROM tags WHERE news_id=1; But, I would also like to know 3 similar articles by comparing tags, so if I have article which has tags "php,mysql,erlang", and 5 articles with tags: "php,mysql", "erlang,ruby", "php erlang", "mysql,erlang,javascript", I would choose 1., 3. and 4., since those 3 have most same tags with main article. Thanks!

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• How to convert full outer join query to O-R query?

  - by Kugel

  I'm converting relational database into object-relational in Oracle. I have a query that uses full outer join in the old one. Is it possible to write the same query for O-R database without explicitly using full outer join? For normal inner join it simple, I just use dot notation together with ref/deref. I'm interested in this in general so let's say the relational query is: select a.attr, b.attr from a full outer join b on (a.fk = b.pk); I want to know if it's a good idea to do it this way: select a.attr, b.attr from a_obj a full outer join b_obj b on (a.b_ref = ref(b));

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• remove duplicate from different columns in mssql 2000

  - by user312549

  i have table : number city1 city2 mentions 1 a b 5 1 b a 5 1 c d 2 1 d c 2 what i need is to remove duplicate records, such as a, b equal to b,a became : number city1 city2 mentions 1 a b 5 1 c d 2 any clue for me ? thanks before :)

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• How to skip the invalid rows while inserting the data into Database

  - by Dinesh

  We have a statement., that is inserting some rows in a temporary table (say e.g., 10 rows), while inserting 5th row, it has some issue with one of the column format and giving an error and then it stopped inserting the rows. What I want is, it should skip the error rows and insert valid rows. For those error rows, it can skip that error column and insert with some null value & different status. create table #tb_pagecontent_value (pageid int,formid uniqueidentifier, id_field xml,fieldvalue xml,label_final xml) … … insert into #tb_pagecontent_xml select A.pageid,B.formid,A.PageData.query('/CPageDataXML/control') from Pagedata A inner join page B on A.PageId=B.PageId inner join FormAssociation C on B.FormId=C.FormId where B.pageid in (select pageId from jobs where jobtype='zba' and StatusFlag!=1) in the above e.g., I want to apply that logic. Any help is appreciated.

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• What are the rules governing how a bind variable can be used in Postgres and where is this defined?

  - by Craig Miles

  I can have a table and function defined as: CREATE TABLE mytable ( mycol integer ); INSERT INTO mytable VALUES (1); CREATE OR REPLACE FUNCTION myfunction (l_myvar integer) RETURNS mytable AS $$ DECLARE l_myrow mytable; BEGIN SELECT * INTO l_myrow FROM mytable WHERE mycol = l_myvar; RETURN l_myrow; END; $$ LANGUAGE plpgsql; In this case l_myvar acts as a bind variable for the value passed when I call: SELECT * FROM myfunction(1); and returns the row where mycol = 1 If I redefine the function as: CREATE OR REPLACE FUNCTION myfunction (l_myvar integer) RETURNS mytable AS $$ DECLARE l_myrow mytable; BEGIN SELECT * INTO l_myrow FROM mytable WHERE mycol IN (l_myvar); RETURN l_myrow; END; $$ LANGUAGE plpgsql; SELECT * FROM myfunction(1); still returns the row where mycol = 1 However, if I now change the function definition to allow me to pass an integer array and try to this array in the IN clause, I get an error: CREATE OR REPLACE FUNCTION myfunction (l_myvar integer[]) RETURNS mytable AS $$ DECLARE l_myrow mytable; BEGIN SELECT * INTO l_myrow FROM mytable WHERE mycol IN (array_to_string(l_myvar, ',')); RETURN l_myrow; END; $$ LANGUAGE plpgsql; Analysis reveals that although: SELECT array_to_string(ARRAY[1, 2], ','); returns 1,2 as expected SELECT * FROM myfunction(ARRAY[1, 2]); returns the error operator does not exist: integer = text at the line: WHERE mycol IN (array_to_string(l_myvar, ',')); If I execute: SELECT * FROM mytable WHERE mycol IN (1,2); I get the expected result. Given that array_to_string(l_myvar, ',') evaluates to 1,2 as shown, why arent these statements equivalent. From the error message it is something to do with datatypes, but doesnt the IN(variable) construct appear to be behaving differently from the = variable construct? What are the rules here? I know that I could build a statement to EXECUTE, treating everything as a string, to achieve what I want to do, so I am not looking for that as a solution. I do want to understand though what is going on in this example. Is there a modification to this approach to make it work, the particular example being to pass in an array of values to build a dynamic IN clause without resorting to EXECUTE? Thanks in advance Craig

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• MySQL SUM Query daily values of a week problem

  - by davykiash

  Am trying to return the sum of each day of a week in mysql but it returns nothing despite having values for the 3rd Week of March 2010 SELECT SUM(expense_details_amount) AS total FROM expense_details WHERE YEAR(expense_details_date) = '2010' AND MONTH(expense_details_date) = '03' AND WEEK(expense_details_date) = '3' GROUP BY DAY(expense_details_date) How do I go about this?

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• batch update mysql table

  - by Yang

  I have a table with a column called time, "HH:MM:SS". How can I do a batch update so that the value increment by 1 hour? Is it something like: update <table_name> set <time_column> = <time_column> + 3600 where ...

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• Override Locale Date with custom setings.

  - by Frank Developer

  Aside from the GL Support, is there a way to override locale settings with custom values for month and day when using mmm-dd-yyyy, modified spanish examples: Jan = ENE, Aug = AGO, or long dates (mmmm) January = ENERO, August = AGOSTO, or (dddd) Monday = LUNES, Thursday = JUEVES, etc.?

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• create table (structure) from existing table

  - by Domnic

  how to create new table which structure should be same as another table i tried, Create table dom as select * from dom1 where 1=2 but its not working error occured

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• How to add condition on multiple-join table

  - by Jean-Philippe

  Hi, I have those two tables: client: id (int) #PK name (varchar) client_category: id (int) #PK client_id (int) category (int) Let's say I have those datas: client: {(1, "JP"), (2, "Simon")} client_category: {(1, 1, 1), (2, 1, 2), (3, 1, 3), (4,2,2)} tl;dr client #1 has category 1, 2, 3 and client #2 has only category 2 I am trying to build a query that would allow me to search multiple categories. For example, I would like to search every clients that has at least category 1 and 2 (would return client #1). How can I achieve that? Thanks!

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• sybase 'drop procedure'. can I get it to take a parameter instead of a naked proc name?

  - by Michael Wilson

  Happy Monday o/ I'm looking to do the following within a stored proc select @parameter="fooproc" drop procedure @parameter instead of drop procedure fooproc But it's choking with a syntax error. Is there some way I can bend this to my will? I would've expected to be able to do this. I've tried a few permutations of type declaration of @parameter to no avail. Thoughts?

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• In MySql Stored Procedure updating more than one time

  - by Both FM

  In MySql UPDATE `inventoryentry` SET `Status` = 1 WHERE `InventoryID`=92 AND `ItemID`=28; It successfully update only one row , where inventoryID = 92 and itemID=28 , the following message displayed. 1 row(s) affected when I put this on stored procedure, as follow CREATE DEFINER=`root`@`localhost` PROCEDURE `Sample`(IN itemId INT, IN itemQnty DOUBLE, IN invID INT) BEGIN DECLARE crntQnty DOUBLE; DECLARE nwQnty DOUBLE; SET crntQnty=(SELECT `QuantityOnHand` FROM `item` WHERE id=itemId); SET nwQnty=itemQnty+crntQnty; UPDATE `item` SET `QuantityOnHand`=nwQnty WHERE `Id`=itemId; UPDATE `inventoryentry` SET `Status` = 1 WHERE `InventoryID`=invID AND `ItemID`=itemId; END$$ calling stored procedures CALL Sample(28,10,92) It update all the status = 1 in inventoryentry against InventoryID (i.e. 92) ignoring ItemID, instead of updating only one row. The following message displayed! 5 row(s) affected Why Stored procedure ignoring itemID in update statement ? or Why Stored procedure updating more than one time? But without Stored procedure it working fine.

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• How do I create a table in SQLite using the VS2008 Server Explorer

  - by fishhead

  Hello, I would like to create a table in a SQLite database using the Server Explorer in VS2008. I am able to do other operations on the database but when it comes to creating a table using the query builder I get Not Supported messages. is there another way other than writing code just for the sole purpose of creating the table? CREATE TABLE myTable ( ID INTEGER PRIMARY KEY AUTOINCREMENT, Name VARCHAR(100) ) .NET Framework Data Provider for SQLite 3.6.16

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• Django: Determining if a user has voted or not

  - by TheLizardKing

  I have a long list of links that I spit out using the below code, total votes, submitted by, the usual stuff but I am not 100% on how to determine if the currently logged in user has voted on a link or not. I know how to do this from within my view but do I need to alter my below view code or can I make use of the way templates work to determine it? I have read http://stackoverflow.com/questions/1528583/django-vote-up-down-method but I don't quite understand what's going on ( and don't need any ofjavascriptery). Models (snippet): class Link(models.Model): category = models.ForeignKey(Category, blank=False, default=1) user = models.ForeignKey(User) created = models.DateTimeField(auto_now_add=True) modified = models.DateTimeField(auto_now=True) url = models.URLField(max_length=1024, unique=True, verify_exists=True) name = models.CharField(max_length=512) def __unicode__(self): return u'%s (%s)' % (self.name, self.url) class Vote(models.Model): link = models.ForeignKey(Link) user = models.ForeignKey(User) created = models.DateTimeField(auto_now_add=True) def __unicode__(self): return u'%s vote for %s' % (self.user, self.link) Views (snippet): def hot(request): links = Link.objects.select_related().annotate(votes=Count('vote')).order_by('-created') for link in links: delta_in_hours = (int(datetime.now().strftime("%s")) - int(link.created.strftime("%s"))) / 3600 link.popularity = ((link.votes - 1) / (delta_in_hours + 2)**1.5) if request.user.is_authenticated(): try: link.voted = Vote.objects.get(link=link, user=request.user) except Vote.DoesNotExist: link.voted = None links = sorted(links, key=lambda x: x.popularity, reverse=True) links = paginate(request, links, 15) return direct_to_template( request, template = 'links/link_list.html', extra_context = { 'links': links, }) The above view actually accomplishes what I need but in what I believe to be a horribly inefficient way. This causes the dreaded n+1 queries, as it stands that's 33 queries for a page containing just 29 links while originally I got away with just 4 queries. I would really prefer to do this using Django's ORM or at least .extra(). Any advice?

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• Problem with checkboxes, sql select statements & php

  - by smokey20

  I am trying to display some rows from a database table based on choices submitted by the user. Here is my form code <form action="choice.php" method="POST" > <input type="checkbox" name="variable[]" value="Apple">Apple <input type="checkbox" name="variable[]" value="Banana">Banana <input type="checkbox" name="variable[]" value="Orange">Orange <input type="checkbox" name="variable[]" value="Melon">Melon <input type="checkbox" name="variable[]" value="Blackberry">Blackberry From what I understand I am placing the values of these into an array called variable. Two of my columns are called receipe name and ingredients(each field under ingredients can store a number of fruits). What I would like to do is, if a number of checkboxes are selected then the receipe name/s is displayed. Here is my php code. <?php // Make a MySQL Connection mysql_connect("localhost", "*****", "*****") or die(mysql_error()); mysql_select_db("****") or die(mysql_error()); $variable=$_POST['variable']; foreach ($variable as $variablename) { echo "$variablename is checked"; } $query = "SELECT receipename FROM fruit WHERE $variable like ingredients"; $row = mysql_fetch_assoc($result); foreach ($_POST['variabble'] as $ingredients) echo $row[$ingredients] . '<br/>'; ?> I am very new to php and just wish to display the data, I do not need to perform any actions on it. I have tried many select statements but I cannot get any results to display. My db connection is fine and it does print out what variables are checked. Many thanks in advance.

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• Optimize "not in" query

  - by Vasu

  Please help optimize this query: SELECT ts.SiteId, COUNT(ts.SiteId) AS Count FROM ts WHERE ts.SiteId not in (SELECT ts.SiteId FROM ts WHERE ts.uniqueid = 'xxx') GROUP BY ts.SiteId ORDER BY Count DESC

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• Table clusters in SQLServer

  - by Bruno Martinez

  In Oracle, a table cluster is a group of tables that share common columns and store related data in the same blocks. When tables are clustered, a single data block can contain rows from multiple tables. For example, a block can store rows from both the employees and departments tables rather than from only a single table: http://download.oracle.com/docs/cd/E11882_01/server.112/e10713/tablecls.htm#i25478 Can this be done in SQLServer?

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• Order by is not working

  - by coure06

  With Results as ( SELECT Top(100) percent ROW_NUMBER() over (Order by (select 1)) as RowNumber, Ad.Date, Title FROM Ad inner join Job on Ad.Id = Job.AdId Order by case When @sortCol='Date' and @sortDir='ASC' Then Date End ASC, case When @sortCol='Date' and @sortDir='DESC' Then Date End DESC ) Select * from Results Where RowNumber BETWEEN @FirstRow AND @LastRow END Whatever is passed in @sortDir and @sortCol it does not work.What am I doing wrong?

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• Membership tables and other tables in one DB or seperate?

  - by JPJedi

  I have an ASP.NET site with membership tables in a Main_DB for the site. Can I add more tables for the site for other data needed for the site or should that data be in another database?

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• MySQL query using multiple criteria from checkboxes

  - by jungle_programmer

  I would like to do a multiple search query usig multiple checkboxes which represent particular textboxes. How do i create a mysql query which will be filtering the checked and unchecked checkboxes (probably using if statements)? The query should be able to filter the checked and ucnchecked boxes and query them using the AND condition. Thanks

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• mysql select two prior to and one after NOW()

  - by Flavius

  Hi I have a table with a column event_time. How can I select two rows right before NOW() and the next one after NOW(), ordered by event_time? Is is possible with a single query?

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• How to get comma-separated values in Linq?

  - by Mujtaba Hassan

  I have the query below: var users = (from a in dc.UserRoles join u in dc.Users on a.intUserId equals u.ID join r in dc.Roles on a.intRoleId equals r.ID where r.intClientId == clientID select new UserRoleDetail { ID = a.ID, intUserId = a.intUserId, intRoleId = a.intRoleId, Name =u.FullName, //Here I need comma separated values. intAssignedById = a.intAssignedById, RoleName = r.vchName, Function = u.vchFunction }); I require all the values of "Name =u.FullName" to be comma-separated in a single record group by intRoleId. I mean for every role I need all the usernames in a sigle record comma separated. Any suggestion?

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• drop down list binding

  - by John

  I have a table which has an Id and a name field. I usually bind the name to the dropdownlist but I was told that any dml should be on the Id so how can I use the name in the dropdownlist and at the same time still use the Id?

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• SQL only row mapping record fetching

  - by Prasanna

  I have a customer call detail table in which call details of all customer stored. I have to find out the distinct aparty (means our customer ) who only calls our customers (means bparty also be our numbers) . There is no other domestic call , International calls made by A party (our customer) in this case. could you people please help me to find the same data. FILE INPUT oF SAMPLE CDR TABLE ROW NAME VALUES ANUMBER :-any mobile number(Domestic+International); for our customer it must like 70,070,0070,9370) BNUMBER :-any mobile number(Domestic+International); for our customer it must like 70,070,0070,9370 CALLTRANSACTION :-eg: 91,92,93 etc CALLTRANSACTIONTYPEC :-eg: MOC,MTC FILENAME :-MCS_01 etc TIME:- any time value Required Output DISTINCT ANUMBER :-for our customer it mobile number must start with 70 or 070 or 0070 or 9370 BNUMBER :- for our customer it mobile number must start with 70 or 070 or 0070 or 9370 means our customer only calls to our network customer ( No other doestic call or international calls made by our operator)

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