Gzip and subprocess' stdout in python

Posted by pythonic metaphor on Stack Overflow See other posts from Stack Overflow or by pythonic metaphor
Published on 2010-05-17T22:26:35Z Indexed on 2010/05/17 22:30 UTC
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I'm using python 2.6.4 and discovered that I can't use gzip with subprocess the way I might hope. This illustrates the problem:

May 17 18:05:36> python
Python 2.6.4 (r264:75706, Mar 10 2010, 14:41:19)
[GCC 4.1.2 20071124 (Red Hat 4.1.2-42)] on linux2
    Type "help", "copyright", "credits" or "license" for more information.

>>> import gzip
>>> import subprocess
>>> fh = gzip.open("tmp","wb")
>>> subprocess.Popen("echo HI", shell=True, stdout=fh).wait()
0
>>> fh.close()
>>>
[2]+  Stopped                 python
May 17 18:17:49> file tmp
tmp: data
May 17 18:17:53> less tmp
"tmp" may be a binary file.  See it anyway?
May 17 18:17:58> zcat tmp

zcat: tmp: not in gzip format

Here's what it looks like inside less

HI
^_<8B>^H^Hh<C0><F1>K^B<FF>tmp^@^C^@^@^@^@^@^@^@^@^@

which looks like it put in the stdout as text and then put in an empty gzip file. Indeed, if I remove the "Hi\n", then I get this:

May 17 18:22:34> file tmp
tmp: gzip compressed data, was "tmp", last modified: Mon May 17 18:17:12 2010, max compression

What is going on here?

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