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  • Java map / nio / NFS issue causing a VM fault: "a fault occurred in a recent unsafe memory access op

    - by Matthew Bloch
    I have written a parser class for a particular binary format (nfdump if anyone is interested) which uses java.nio's MappedByteBuffer to read through files of a few GB each. The binary format is just a series of headers and mostly fixed-size binary records, which are fed out to the called by calling nextRecord(), which pushes on the state machine, returning null when it's done. It performs well. It works on a development machine. On my production host, it can run for a few minutes or hours, but always seems to throw "java.lang.InternalError: a fault occurred in a recent unsafe memory access operation in compiled Java code", fingering one of the Map.getInt, getShort methods, i.e. a read operation in the map. The uncontroversial (?) code that sets up the map is this: /** Set up the map from the given filename and position */ protected void open() throws IOException { // Set up buffer, is this all the flexibility we'll need? channel = new FileInputStream(file).getChannel(); MappedByteBuffer map1 = channel.map(FileChannel.MapMode.READ_ONLY, 0, channel.size()); map1.load(); // we want the whole thing, plus seems to reduce frequency of crashes? map = map1; // assumes the host writing the files is little-endian (x86), ought to be configurable map.order(java.nio.ByteOrder.LITTLE_ENDIAN); map.position(position); } and then I use the various map.get* methods to read shorts, ints, longs and other sequences of bytes, before hitting the end of the file and closing the map. I've never seen the exception thrown on my development host. But the significant point of difference between my production host and development is that on the former, I am reading sequences of these files over NFS (probably 6-8TB eventually, still growing). On my dev machine, I have a smaller selection of these files locally (60GB), but when it blows up on the production host it's usually well before it gets to 60GB of data. Both machines are running java 1.6.0_20-b02, though the production host is running Debian/lenny, the dev host is Ubuntu/karmic. I'm not convinced that will make any difference. Both machines have 16GB RAM, and are running with the same java heap settings. I take the view that if there is a bug in my code, there is enough of a bug in the JVM not to throw me a proper exception! But I think it is just a particular JVM implementation bug due to interactions between NFS and mmap, possibly a recurrence of 6244515 which is officially fixed. I already tried adding in a "load" call to force the MappedByteBuffer to load its contents into RAM - this seemed to delay the error in the one test run I've done, but not prevent it. Or it could be coincidence that was the longest it had gone before crashing! If you've read this far and have done this kind of thing with java.nio before, what would your instinct be? Right now mine is to rewrite it without nio :)

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  • Garbage Collector not doing its job. Memory Consumption = 1.5GB & OutOFMemory Exception.

    - by imageWorker
    I'm working with images (each of size = 5MB). The following code extract some information from each image that is present in the given directory. I'm getting out of memory exception. The size of the process is around (1.5GB). I don't know why garbage collector is not freeing memory. I even tried adding GC.Collect() as last line of foreach loop. Still I'm getting 'OutOFMemory' using System; using System.Collections.Generic; using System.Linq; using System.Text; using System.Threading; using System.IO; using System.Drawing; using System.Drawing.Imaging; namespace TrainSVM { class Program { static void Main(string[] args) { FileStream fs = new FileStream("dg.train",FileMode.OpenOrCreate,FileAccess.Write); StreamWriter sw = new StreamWriter(fs); String[] filePathArr = Directory.GetFiles("E:\\images\\"); foreach (string filePath in filePathArr) { if (filePath.Contains("lmn")) { sw.Write("1 "); Console.Write("1 "); } else { sw.Write("1 "); Console.Write("1 "); } Bitmap originalBMP = new Bitmap(filePath); /***********************/ Bitmap imageBody; ImageBody.ImageBody im = new ImageBody.ImageBody(originalBMP); imageBody = im.GetImageBody(-1); /* white coat */ Bitmap whiteCoatBitmap = Rgb2Hsi.Rgb2Hsi.GetHuePlane(imageBody); float WhiteCoatPixelPercentage = Rgb2Hsi.Rgb2Hsi.GetWhiteCoatPixelPercentage(whiteCoatBitmap); //Console.Write("whiteDone\t"); sw.Write("1:" + WhiteCoatPixelPercentage + " "); Console.Write("1:" + WhiteCoatPixelPercentage + " "); /******************/ Quaternion.Quaternion qtr = new Quaternion.Quaternion(-15); Bitmap yellowCoatBMP = qtr.processImage(imageBody); //yellowCoatBMP.Save("yellowCoat.bmp"); float yellowCoatPixelPercentage = qtr.GetYellowCoatPixelPercentage(yellowCoatBMP); //Console.Write("yellowCoatDone\t"); sw.Write("2:" + yellowCoatPixelPercentage + " "); Console.Write("2:" + yellowCoatPixelPercentage + " "); /**********************/ Bitmap balckPatchBitmap = BlackPatchDetection.BlackPatchDetector.MarkBlackPatches(imageBody); float BlackPatchPixelPercentage = BlackPatchDetection.BlackPatchDetector.BlackPatchPercentage; //Console.Write("balckPatchDone\n"); sw.Write("3:" + BlackPatchPixelPercentage + "\n"); Console.Write("3:" + BlackPatchPixelPercentage + "\n"); balckPatchBitmap.Dispose(); yellowCoatBMP.Dispose(); whiteCoatBitmap.Dispose(); originalBMP.Dispose(); sw.Flush(); } sw.Dispose(); fs.Dispose(); } } }

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  • UITableView less than full screen from code?

    - by Gerry
    I have a number of views that use UITableView. (I use UIViewController and implement UITableViewDelegate and UITableViewDataSource interfaces.) I'm having trouble creating a tableview that leaves room at the top for a toolbar. How to I size and layout the Tableview so that it is less than full screen? Is this an AutoResizing mask problem? Thanks, Gerry

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  • Finding key Solr performance metrics

    - by Mike Malloy
    To improve performance of Solr find your slowest searches, monitor query results, cache hit rate and cache size, document cache and filter cache; find problems with Solr update handlers by tracking index operations and document operations. There is a tool from New Relic which may help. http://www.newrelic.com/solr.html

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  • Jquery image preview thumbnail doesn't seem to work....

    - by Pandiya Chendur
    I just tried the tooltip like this Easy image preview... But i cant get it to work.... I used this, <style> body { margin:0; padding:40px; background:#fff; font:80% Arial, Helvetica, sans-serif; color:#555; line-height:180%; } h1{ font-size:180%; font-weight:normal; color:#555; } h2{ clear:both; font-size:160%; font-weight:normal; color:#555; margin:0; padding:.5em 0; } a{ text-decoration:none; color:#f30; } p{ clear:both; margin:0; padding:.5em 0; } pre{ display:block; font:100% "Courier New", Courier, monospace; padding:10px; border:1px solid #bae2f0; background:#e3f4f9; margin:.5em 0; overflow:auto; width:800px; } img{border:none;} ul,li{ margin:0; padding:0; } li{ list-style:none; float:left; display:inline; margin-right:10px; } /* */ #preview{ position:absolute; border:1px solid #ccc; background:#333; padding:5px; display:none; color:#fff; } /* */ </style> <script type="text/javascript" src="jquery.js"></script> <ul> <li> <a href="Images/4.jpg" class="preview" title="Lake and a mountain"> <img src="Images/4s.jpg" alt="gallery thumbnail" /> </a> </li> </ul> and included style... Nothing happens when i hover over the anchor tag....

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  • php upload file function

    - by Jacksta
    I am trying to write a script which uploads a file via a html form. When I click submit nothing happens. file: upload_form.html <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> <title>Untitled Document</title> </head> <body> <form action="do_upload.php" method="post" enctype="multipart/form-data"></form> <p><strong>File to upload</strong></p> <p><input name="img1" type="file" size="30" /></p> <p><input name="submit" type="submit" value="Upolad File" /></p> </body> </html> file: do_upload.php <?php if ($_FILES[img1] != "" { @copy($_FILES[img1] [tm_name], "/tmp" .$_FILES[img1][name]) or die("couldnt copy the file"); } else { die("no file specified"); } ?> <HTML> <head> <title>Successfull File Upload</title> </head> <body> <h1>Success</h1> <p>You sent: <? echo $_FILES[img1][name]; ?>, a <? echo $_FILES[img1][size]; ?>byte filw with a mime type of <? echo $_FILES[img1][type]; ?></p> </body> </HTML>

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  • Running out of memory while analyzing a Java Heap Dump

    - by Abel Morelos
    Hi, I have a curious problem, I need to analyze a Java heap dump (from an IBM JRE) which has 1.5GB in size, the problem is that while analyzing the dump (I've tried HeapAnalyzer and the IBM Memory Analyzer 0.5) the tools runs out of memory I can't really analyze the dump. I have 3GB of RAM in my machine, but seems like it's not enough to analyze the 1.5 GB dump, My question is, do you know a specific tool for heap dump analysis (supporting IBM JRE dumps) that I could run with the amount of memory I have? Thanks.

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  • JPA is not good enough

    - by Cristiano Sanchez
    Working in a medium size project during last 4 months - we are using JPA and Spring - I'm quite sure that JPA is not powerfull for projects that requires more than CRUD screen... Query interface is poor, Hibernate doesn't respect JPA spec all the time and lot of times I need to use hibernate classes, annotations and config. What do you guys think about JPA? Is it not good enough?

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  • Tinymce print issue with application server

    - by Ashok
    Hi, I have incorporated tinymce into my application. When i execute the jsp standalone, the print size seem consistent to what it should be i.e. 12Pt comes out as 12pt. Whereas when i run the same jsp from oracle developer using oracle application server 12pt comes out to be more like 8pt. Any thoughts. Please share any pointers. Thanks, Ashok

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  • PHP uploads file - enctype="multipart/form-data" issue

    - by user147685
    Hi all, I have this upload code. there are no problem running it individually, but when i try to add into my other codes, it did not get the $_files parameter. Im guessing it was becoz of enctype="multipart/form-data" in the form tag, based on this post: http://stackoverflow.com/questions/1695246/why-file-upload-didnt-work-without-enctype the enctype is needed. SO my problem is, how can i do upload files without concern to this? can we juz change the code structure so that it will be compatible with other codes? if($_POST['check']){ $faillampiran=$_POST['faillampiran']; $file=$_FILES['faillampiran']["name"]; $fileSize = $_FILES['faillampiran']['size']; $fileType = $_FILES['faillampiran']['type']; if ($_FILES["faillampiran"]["error"] > 0 ) { echo "Return Code: " . $_FILES["faillampiran"]["error"] . "<br />"; } else { move_uploaded_file($_FILES["faillampiran"]["tmp_name"],"upload/" . $_FILES["faillampiran"]["name"]); echo '<table align = "center">'; echo "<tr><td>"; echo "Your file has been successfully stored."; echo "</td></tr>"; echo '</table>'; } } ?> <form method="post" name="form1" id="form1" enctype="multipart/form-data"> <tr><td></td><td><input type="hidden" name="MAX_FILE_SIZE" value=""> </td> </tr> <tr><td> Please choose a file</td><td>:</td></tr> <tr> <input type="file" size="50" name="faillampiran" alt="faillampiran" id="faillampiran" 1value= "<?=$faillampiran;?>" /> <tr align = "center"><td colspan = "3"><input type="submit" value="Hantar" name="check"/></td></tr> </tr></form> thank you.

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  • CALayers didn't get resized on its UIView's bounds change. Why?

    - by Geri
    I have a UIView which has about 8 different CALayer sublayers added to its layer. If I modify the view's bounds (animated), then the view itself gets shrinked (I checked it with a backgroundColor), but the sublayers' size remains unchanged. How to solve this? I've just started googleing but haven't found any useful. Thanks in advance.

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  • how to add Continue String Sign like "..." in TextView?

    - by UMMA
    if i add string in a TextView for example, this is my string and TextView max length is 4 It should look like in activity this... or t... that means string continue sign at the end of assigned string if string size is bigger than Max length. Can any one guide me what should i do or i will have to manually add "..." at the end of string through programming. Any help would be appreciated.

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  • How to use Wordpress' http.php in external projects?

    - by NJTechGuy
    I am trying to parse data from a pipe-delimited text file hosted on another server which in turn will be inserted in a database. My host (1and1) disabled allow_url_fopen in php.ini I guess. Error message : Warning: fopen() [function.fopen]: URL file-access is disabled in the server configuration in Code : <? // make sure curl is installed if (function_exists('curl_init')) { // initialize a new curl resource $ch = curl_init(); // set the url to fetch curl_setopt($ch, CURLOPT_URL, 'http://abc.com/data/output.txt'); // don't give me the headers just the content curl_setopt($ch, CURLOPT_HEADER, 0); // return the value instead of printing the response to browser curl_setopt($ch, CURLOPT_RETURNTRANSFER, 1); // use a user agent to mimic a browser curl_setopt($ch, CURLOPT_USERAGENT, 'Mozilla/5.0 (Windows; U; Windows NT 5.1; en-US; rv:1.7.5) Gecko/20041107 Firefox/1.0'); $content = curl_exec($ch); // remember to always close the session and free all resources curl_close($ch); } else { // curl library is not installed so we better use something else } //$contents = fread ($fd,filesize ($filename)); //fclose ($fd); $delimiter = "|"; $splitcontents = explode($delimiter, $contents); $counter = ""; ?> <font color="blue" face="arial" size="4">Complete File Contents</font> <hr> <? echo $contents; ?> <br><br> <font color="blue" face="arial" size="4">Split File Contents</font> <hr> <? foreach ( $splitcontents as $color ) { $counter = $counter+1; echo "<b>Split $counter: </b> $colorn<br>"; } ?> Wordpress has this cool http.php file. Is there a better way of doing it? If not, how do I use http.php for this task? Thank you guys..

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  • WCF service for receiving image

    - by elgrego
    What is the best way to create a webservice for accepting an image. The image might be quite big and I do not want to change the default receive size for the web application. I have written one that accepts a binary image but that I feel that there has to be a better alternative.

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  • jQuery test if element1 is child of element2

    - by Jake
    Does anyone know a good way to test if one element, stored in a var, is the child of another, also stored in a var? I don't need element1.isChildOf('selector'), that's easy. I need element1.isChildOf(element2) element2.find(element1).size() > 0 Does not seem to work. I don't want to have to write a plugin the uses .each to test each child if I can avoid it.

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  • Boost::Serialization Mpi Sending array of user defined types

    - by Noman Javed
    I want to send my Array class using boost Mpi template class Array { private: int size; T* data; public: // constructors + other stuff }; Here T can be any built in type or user defined type. Suppose I have a class complex struct complex { std::vector real_imag; // contain two elements }; So the question is how can I send Array using Boost::Mpi + serialization. Thanks in anticipation Regards Noman

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  • view Large PDF file in iPhone SDK

    - by aRrAY
    I have followed some tutorial that teach me how to view PDF file in UIWebView, however I found that if the file size is large, it will be lag when I zoom the PDF, but it doesn't occur in Mobile Safari. So anyone know how to solve it?

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