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  • Clustered Graphs Visualization Techniques

    - by jameszhao00
    I need to visualize a relatively large graph (6K nodes, 8K edges) that has the following properties: Distinct Clusters. Approximately 50-100 Nodes per cluster and moderate interconnectivity at the cluster level Minimal (5-10 inter-cluster edges per cluster) interconnectivity between clusters Let global edge overlap = The edge overlaps caused by directly visualizing a graph of Clusters = {A, B, C, D, E}, Edges = {Pentagram of those clusters, which is non-planar by the way and will definitely generate edge overlap if you draw it out directly} Let Local Edge Overlap = the above but { A, B, C, D, E } are just nodes. I need to visualize graphs with the above in a way that satisfies the following requirements No global edge overlap (i.e. edge overlaps caused by inter-cluster properties is not okay) Local edge overlap within a cluster is fine Anyone have thoughts on how to best visualize a graph with the requirements above? One solution I've come up with to deal with the global edge overlap is to make sure a cluster A can only have a max of 1 direct edge to another cluster (B) during visualization. Any additional inter-cluster edges between cluster A - C, A - D, ... are disconnected and additional node/edges A - A_C, C - C_A, A - A_D, D - D_A... are created. Anyone have any thoughts?

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  • Mike Cohn-style burndown charts in JIRA

    - by Fuzzy Purple Monkey
    We use Jira/Greenhopper for our project planning/tracking. The built-in graphs are great, but when a new issue/story is added during a project, the whole burn-down graph moves up rather than increasing the part of the graph when the issue was added. Ideally I'd like to generate a Mike Cohn-style burndown graph, which shows a hump when new issues are added. Does anyone know of any plugins that support this, or been able to extract this data directly from the database?

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  • How can I shade a region between two lines in flot?

    - by Oren
    I have had a lot of success creating graphs with Flot. However, I can not seem to figure out how one would go about shading in a region between two lines using the library. My goal is to be able to create shaded regions as illustrated below: I found this plugin, but it appears that it can only shade a range of values of a line, as demonstrated here.

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  • python cairoplot store previous readings..

    - by krisdigitx
    hi, i am using cairoplot, to make graphs, however the file from where i am reading the data is growing huge and its taking a long time to process the graph is there any real-time way to produce cairo graph, or at least store the previous readings..like rrd. -krisdigitx

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  • how to create a wind rose in excel 2007

    - by Patrick
    I am attempting to create a wind rose graph (i.e.- here or here). My data is wind speed and cardinal wind direction in separate columns: Wind (mph) Wind Direction 3.66 SE 2.69 SE 2.62 SW 2.76 SW 2.11 NW 3.13 NW 3.55 SW 3.62 W My final goal is to actually create the graph with a VBA macro, but I am unsure how to even create the graph manually. I can, if need be, convert the cardinal directions to degrees. Any help is greatly appreciated

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  • Graph paper like drawing software

    - by Algorist
    Hi, I have a college assignment, where I have to draw diagrams of voronoi, delaunay, minimum spanning tree etc for the college. I want to do that in computer. I searched in google with no luck. Is there any good graph drawing software you are aware of? Thank you Bala

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  • Can I run 8 to 12 Monitors from one Laptop?

    - by Dan
    I would like to run at least 8 monitors & possibly 12, from a Dell Precision M6800 mobile Laptop Workstation. Monitors I want to run are Dell U2412M ( 1920x1200 ) Ultra Sharp Monitors. The specs for the Laptop are : Intel Core i7-4700MQ Processor (17.3") UltraSharp FHD(1920x1080) 8GB (2x4GB) 1600MHz DDR3L AMD FirePro M6100 w/2GB GDDR5 2.5 inch 500GB Solid State Hybrid Drive Is it possible to do it & if yes, what other hardware, software do I need besides monitors ? Thanks

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  • calculate AUC (GAM) in R [migrated]

    - by ahmad
    I used the following script to calculate AUC in R: library(mgcv) library(ROCR) library(AUC) data1=read.table("d:\\2005.txt", header=T) GAM<-gam(tuna ~ s(chla)+s(sst)+s(ssha),family=binomial, data=data1) gampred<- predict(GAM, type="response") rp <- prediction(gampred, data1$tuna) auc <- performance( rp, "auc")@y.values[[1]] auc roc <- performance( rp, "tpr", "fpr") plot( roc ) But when I was running the script, the result is: **rp <- prediction(gampred, data1$tuna) Error in prediction(gampred, data1$tuna) : Format of predictions is invalid. > > auc <- performance( rp, "auc")@y.values[[1]] Error in performance(rp, "auc") : object 'rp' not found > auc function (x, min = 0, max = 1) { if (any(class(x) == "roc")) { if (min != 0 || max != 1) { x$fpr <- x$fpr[x$cutoffs >= min & x$cutoffs <= max] x$tpr <- x$tpr[x$cutoffs >= min & x$cutoffs <= max] } ans <- 0 for (i in 2:length(x$fpr)) { ans <- ans + 0.5 * abs(x$fpr[i] - x$fpr[i - 1]) * (x$tpr[i] + x$tpr[i - 1]) } } else if (any(class(x) %in% c("accuracy", "sensitivity", "specificity"))) { if (min != 0 || max != 1) { x$cutoffs <- x$cutoffs[x$cutoffs >= min & x$cutoffs <= max] x$measure <- x$measure[x$cutoffs >= min & x$cutoffs <= max] } ans <- 0 for (i in 2:(length(x$cutoffs))) { ans <- ans + 0.5 * abs(x$cutoffs[i - 1] - x$cutoffs[i]) * (x$measure[i] + x$measure[i - 1]) } } return(as.numeric(ans)) } <bytecode: 0x03012f10> <environment: namespace:AUC> > > roc <- performance( rp, "tpr", "fpr") Error in performance(rp, "tpr", "fpr") : object 'rp' not found > plot( roc ) Error in levels(labels) : argument "labels" is missing, with no default** Can anybody help me to solve this problem? Thank you in advance.

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  • How to plot survey results on Excel?

    - by Mulone
    Hi all, I would like to plot the average of these data sample: 1. Contribution to the project 2. Affiliation with project owners 3. Level of expertise 4. Learning Curve Yes No 3 2 No No 3 2 No No 4 3 No No 5 3 No No 3 3 Yes Yes 5 4 No No 4 3 No No 3 2 No Yes 2 4 No No 5 2 No Yes 5 No answer No No 2 2 No No 3 3 ... Basically I know how to do the average of each numeric column, but I have a few questions for you: If the column contains non numeric values (e.g. "no answer") the average doesn't work. Is there a workaround for this? How can I count the yes/no results and plot only a percentage? Thanks for any hints! Mulone

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  • Excel Graph: How can I turn data below in to a 'time based' graph

    - by Mike
    In my spreadsheet I am collecting time periods when certain values have been changed. The user is restricted to 4 time periods. I would like to show the data based on thos time periods. I've included a mock up' of the data and the type of graph I would like to create. I've tried to create it for the last hour but am obviously missing something so thought I'd ask around. http://i48.tinypic.com/55lezr.jpg Many thanks for any help Mike P.S How do I make this image appear in the message and not as a link?

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  • Excel: making line charts so the line goes through all data points

    - by Mike
    Hi I've got data based on over 50+ years for various products. Unfortunately not all products have data for each year. I've created a line chart to show the movement (quantity sold) of these products over the years. It works well, except where the data points are too far apart i.e. 1965 and then 1975. For some reason there is no line. It's not perfect data because of the missing years, but I can live with that, I just want to see the trend, and not just sporadic dots; squares or crosses. Any help or links greatly appreciated. Mike

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  • Visualizing Parallel Branch and Bound Tree Exploration

    - by Akhil
    I have written a parallel program that does a depth first branch and bound exploration of a tree. I can dump the id's (id's are like this 0, 00, 01, 0000, 0001, etc.) of the nodes at frequent intervals to know the frontier of the tree that is being explored at that instant in the tree. The challenge is to visualize the tree exploration with time. Any ideas? e.g. I can draw trees(e.g. using graphViz) at different times and create a movie out of it. Looking for ideas to facilitate this visualization - some better ways to do so or easy tools that can help me make the visualization

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  • How can I make Excel correlate data from two data sets into a single graph?

    - by Tom Ritter
    I have two datasets, one being sparser than the other. They look like this: Data Set 1: 4 50 5 55 6 60 7 70 8 80 Data Set 2: 4 10 6 20 8 30 I have several hundred points instead of this few. I want them in the same graph, the X axis being 4-8, the y axis being 0-100ish, and two lines, one for each data set. What I get is two lines, not correlated at all along the X axis, and the X axis being labeled from one of the two datasets, with the labels being wrong for the other. The smaller data set is one-point-per-tick on the x axis, when I need it to skip ticks and actually line up with the other data set. Not married to excel, willing to try this in something else if it's free.

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  • How do I make the first row of an Excel chart be treated as a heading when it's a number?

    - by Andrew Grimm
    Given a data sample like Prisoner 24601 0.50 Day 1 80 90 Day 2 81 89 Day 3 82 90 Day 4 81 91 What's the easiest way to tell Excel that 24601 and 0.50 are data series names rather than Y axis values when creating a line chart? Approaches I'm aware of: Turn Prisoner numbers into text by having ="24601" and ="0.50" Only select rows 2 onwards as data, and then add in the labels once the graph has been created? Approaches that don't appear to work: Ask Excel to format the first row's numbers as text.

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  • Excel 2007: plot data points not on an axis/ force linear x-incrementation without altering integrity of non-linear data

    - by Ennapode
    In Excel, how does one go about plotting points that don't have an x component that is an x-axis label? For example, in my graph, the x-components are derived from the cosine function and aren't linear, but Excel is displaying them as if .0016 to .0062 to .0135 is an equal incrementation. How would I change this so that the x-axis has an even incrementation without altering the integrity of the points themselves? In other words, how do I plot a point with an x component independent from the x-axis label?

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  • Common and useful Graph functions?

    - by Nazgulled
    Hi, I'm implementing a simple Graph library for my uni project and since this is the first time I'm dealing with graphs, I would like to know which functions you guys consider to be most common and useful for Graph implementations... So far, I have this: graphInitialize() graphInsertVertex() graphRemoveVertex() graphGetVertex() graphGetVertexValue() (not implemented yet, not sure if I'll need it) graphInsertEdge() graphRemoveEdge() graphLinkVertices() (this calls graphInsertEdge twice for bidirectional graph) graphUnlinkVertices() (this calls graphRemoveEdge twice for bidirectional graph) graphDestroy() I know I'm missing a function do determine the shortest path, but I'm leaving that for last... Do you think I'm missing any common/useful function?

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  • suggestions for a 3D graph rendering library?

    - by Sandro
    Hello coders! So I'm not sure how stackoverflow friendly this question is since it doesn't have a quick clear cut answer but here we go... I have a java program that generates data for a directed graph. Now I need to render this graph. The data needs to be laid out in 3D, and I want to be able to define which plane an edge lives in. (Each edge will only need to occupy 1 plane of the 3D space). I also need the ability to navigate around the graph. Since I know that this kind of stuff is hard, I'm going shopping. So far I've looked into (In no particular order): JUNG: lacks 3D support Cytoscape: not sure how much I'll be able to define edge drawing, haven't seen a non bio-informatics application of it yet JGraph: I didn't see any 3D applications yet Perfuse: looks promising, does anyone know anything else about it? Gephi: Documentation looks scarce Processing: does this play well with java? I'm also considering doing some combination of opengl + swing rendering to create a 3D graph from multiple 2D graphs. I am also not adverse to the idea of linking from another language Any Ideas? Thank you.

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  • How to disable scaling in JFreeChart?

    - by Alex Arnon
    Hi All, We're using JFreeChart to build an engine to display graphs. This is a web service that runs on Tomcat + Java 1.5.0, and renders charts to PNGs and JPEGs (using ChartUtilities.writeChartAs{PNG,JPEG}() ). We've run into a problem where JFreeChart seems to scale everything inside the Plot area, but only by a few pixels. The result is that the graph looks inconsistent, e.g.: Minor ticks are sometimes stretched horizontally, so that they seem to be two pixels wide instead of one. We use a small image in the top-right of the plot area as a watermark. This is stretched by one pixel horizontally and vertically somewhere near (but not exactly) its middle. Background grid lines seem to appear on sub-pixel boundaries. I have not found a way to create an accurately dotted grid line. We have tried both 1.0.9 and 1.0.13, with exactly the same results (except for the minor ticks, which were not available in the older version). Also, rendering the image to a Frame instead of JPEG/PNG produced an identical result. Help is greatly appreciated, in advance :)

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  • Pruning data for better viewing on loglog graph - Matlab

    - by Geodesic
    Hi Guys, just wondering if anyone has any ideas about an issue I'm having. I have a fair amount of data that needs to be displayed on one graph. Two theoretical lines that are bold and solid are displayed on top, then 10 experimental data sets that converge to these lines are graphed, each using a different identifier (eg the + or o or a square etc). These graphs are on a log scale that goes up to 1e6. The first few decades of the graph (< 1e3) look fine, but as all the datasets converge ( 1e3) it's really difficult to see what data is what. There's over 1000 data points points per decade which I can prune linearly to an extent, but if I do this too much the lower end of the graph will suffer in resolution. What I'd like to do is prune logarithmically, strongest at the high end, working back to 0. My question is: how can I get a logarithmically scaled index vector rather than a linear one? My initial assumption was that as my data is lenear I could just use a linear index to prune, which lead to something like this (but for all decades): //%grab indicies per decade ind12 = find(y >= 1e1 & y <= 1e2); indlow = find(y < 1e2); indhigh = find(y > 1e4); ind23 = find(y >+ 1e2 & y <= 1e3); ind34 = find(y >+ 1e3 & y <= 1e4); //%We want ind12 indexes in this decade, find spacing tot23 = round(length(ind23)/length(ind12)); tot34 = round(length(ind34)/length(ind12)); //%grab ones to keep ind23keep = ind23(1):tot23:ind23(end); ind34keep = ind34(1):tot34:ind34(end); indnew = [indlow' ind23keep ind34keep indhigh']; loglog(x(indnew), y(indnew)); But this causes the prune to behave in a jumpy fashion obviously. Each decade has the number of points that I'd like, but as it's a linear distribution, the points tend to be clumped at the high end of the decade on the log scale. Any ideas on how I can do this?

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  • Plot 2 graphs in same plot in R?

    - by Sandra Schlichting
    I would like to plot y1 and y2 in the same plot. x <- seq(-2, 2, 0.05) y1 <- pnorm(x) y2 <- pnorm(x,1,1) plot(x,y1,type="l",col="red") plot(x,y2,type="l",col="green") But when I do it like this, they are not plotted in the same plot together. In Matlab can one do hold on, but does anyone know how to do this in R?

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