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• Is there a way to automatically update the documentation in an R package?

  - by David

  I used 'package.skeleton()' to generate .Rd help files a few months ago. I have edited these files, and I have also changed the functions, removed some functions, added others. Is there a function that automates updating the Rd files? update A nice package was just released called Rd2roxygen, it is described by the author Yihui Xie on his blog. As the name implies, this package allows one to retroactively insert documentation currently contained in .Rd into .R files. Sounds like a promising approach for both learning roxygen and for converting packages currently in development to R packages. Woo hoo. Thanks Yihui!

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• Bash commands not executed when through cron job - PHP

  - by basicxman

  Hi there! I have a cron job running a PHP script every five minutes; the PHP script executes two bash commands at the end of the script. I know the script is running due to a log file it appends to. When I run the PHP script manually via the Ubuntu Gnome Terminal both bash commands execute flawlessly; however when the PHP script is triggered via cron, the two bash commands are not ran. Any ideas? $command = 'notify-send "' . count($infoleakPosts) . ' New Posts."'; `$command`; $command = 'firefox http://example.com'; `$command`; */1 * * * * php /home/andrew/grab.php USERNAME PASSWORD # JOB_ID_1

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• Rails: restful authentication setup help

  - by SuperString

  Hi I downloaded the plugin from http://github.com/techweenie/restful-authentication.git Then I run rails generate plugin authenticated user session This is the result I got: create vendor/plugins/authenticated create vendor/plugins/authenticated/MIT-LICENSE create vendor/plugins/authenticated/README create vendor/plugins/authenticated/Rakefile create vendor/plugins/authenticated/init.rb create vendor/plugins/authenticated/install.rb create vendor/plugins/authenticated/uninstall.rb create vendor/plugins/authenticated/lib create vendor/plugins/authenticated/lib/authenticated.rb invoke test_unit inside vendor/plugins/authenticated create test create test/authenticated_test.rb create test/test_helper.rb Then I tried to do rake db:migrate But I got error that says rake tasks in restful-authentication/tasks/auth.rake are deprecated. Use lib/tasks instead. I am new to rails, tried looking online but things seem to be outdated. Please help!

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• Is there a nice XSL stylesheet for client-side DocBook rendering?

  - by Steven Huwig

  I want the DocBook documents in my SVN repository to look nice if someone looks at them in a web browser. I've started to write a CSS stylesheet, but I think that it will have significant limitations -- particularly ones regarding hyperlinks. There is a large body of DocBook XSL stylesheets at the DocBook site , but they don't seem to be appropriate for browser rendering. I don't want to generate static documents and put them into SVN. I want them to be basically readable for other developers without much hassle. I could write my own browser-appropriate XSL stylesheet to convert DocBook to HTML, but it seems like someone else must have already done this. I just don't know where to find it.

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• AnkhSVN, mysisgit and Pageant

  - by Chalkey

  I have recently installed msysgit on my machine (its running Windows 7) to use Git for some projects. A lot of my projects are under SVN, in which I use AnkhSVN in Visual Studio 2008 to commit etc. Since I have installed msysgit everytime I try to commit, update etc inside Visual Studio, the program C:\msysgit\bin\ssh.exe loads up, asks for my password, then Ankh throws an exception. I currently use Pageant to save my login credentials for SVN - I have TortoiseSVN installed, which is still working fine... Has anybody got any suggestions to get Anhk working again - without uninstalling msysgit? Thanks

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• jQuery Plugin Overwriting Parameters

  - by Travis

  Hey Everyone, This maybe a very mundane question, but this is the first jQuery plugin that I write and I'm a bit fuzzy on understanding the scope rules in Javascript. I'm trying to write an simple jQuery plugin that wraps around the Stack Overflow API. I'm starting off by trying to work with the Flair API. I wanted to make the plugin as configurable as possible so that you can easily pass it the domain and user id, and generate multiple Flairs. var superUser = $.jStackOverflow.flair({domain:"superuser.com", id: 30162, parentId:'#su-flair'}); var stackOverflow = $.jStackOverflow.flair({domain:"stackoverflow.com", id: 55954, parentId:'#so-flair'}); The problem is, when it makes the second call, its somehow using the correct domain and id parameters, but the parentId field that it's using in the callback function to create the html, is using the first parameter. You can see the plugin here and the html here

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• Best Template Engine for ASP.NET MVC

  - by OnesimusUnbound

  I am exploring ASP.NET MVC and I wanted to add jQuery to make the site interactive. I used StringTemplate, ported to .Net, as my template engine to generate html and to send JSON. However, when I view the page, I could not see it. After debugging, I've realized that the $ is used by the StringTemplate to access property, etc and jQuery uses it too to manipulate the DOM. Gee, I've looked on other template engines and most of them uses the dollar sign :(. Any alternative template engine for ASP.Net MVC? I wanted to retain jQuery because MSFT announced that it will used in the Visual Studio (2008?) Thanks in Advance :)

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• strange nhibernate exception? "(0xc0000005 at address 5A17BF2A): likely culprit is 'PARSE'."

  - by nRk

  Hi i am gettin a strange exception in may windows service application, but it was working fine for a long time and suddenly gave this error: 2010-05-11 07:00:03,154 ERROR [0 ] [NHibernate.Cfg.Configuration.LogAndThrow] - Could not compile the mapping document: xxxx.hbm.xml NHibernate.MappingException: Could not compile the mapping document: xxxx.hbm.xml ---> System.InvalidOperationException: Unable to generate a temporary class (result=1). error CS0001: Internal compiler error (0x80004005) error CS0001: Internal compiler error (0xc0000017) error CS0583: Internal Compiler Error (0xc0000005 at address 5A17BF2A): likely culprit is 'PARSE'. error CS0586: Internal Compiler Error: stage 'PARSE' error CS0587: Internal Compiler Error: stage 'PARSE' error CS0587: Internal Compiler Error: stage 'BEGIN' any could help me in understanding this issue/error why it came and to solve it? Thanks nRk

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• SVN Mac oSX issue - permissions?

  - by Steve Griff

  Hello there, /Volumes/sites is a connection to a samba share that hosts some of our sites. We authorise using a username & password that is the same user/pass to log onto the mac. When committing, (or even doing a cleanup) from the Mac Client side using the svn command line tool or SCPlugin, this error occurs: Commit succeeded, but other errors follow: Error bumping revisions post-commit (details follow): In directory '/Volumes/sites/foobar/public_html' Error processing command 'committed' in '/Volumes/sites/foobar/public_html' Error replacing text-base of 'index.php' Can't move '/Volumes/sites/foobar/public_html/.svn/tmp/text-base/index.php.svn-base' to '/Volumes/sites/foobar/public_html/.svn/text-base/index.php.svn-base': Operation not permitted Any ideas? I think it's to do with permissions on the mac side not being able to move files around on the samba share. Apologies if my question is kinda vague so any extra information I can give please shout. Regards Steve

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• mysql alter to table

  - by user485783

  Hi, I drop the mysql alter code below to database via phpmyadmin one by one, it it work fine, is there anyone could help me how to drop it all together at once? or do you know the the samples of php code that may execute it? just let me know please. thanks in advace ALTER TABLE user ADD title varchar(16) COLLATE utf8_bin NOT NULL DEFAULT '' AFTER user_id ALTER TABLE customer ADD title varchar(16) COLLATE utf8_bin NOT NULL DEFAULT '' AFTER customer_id ALTER TABLE customer ADD date_birtdate datetime NOT NULL DEFAULT '0000-00-00 00:00:00' AFTER lastname ALTER TABLE customer ADD security_question varchar(96) COLLATE utf8_bin NOT NULL DEFAULT '' AFTER fax ALTER TABLE customer ADD security_answer varchar(96) COLLATE utf8_bin NOT NULL DEFAULT '' AFTER fax ALTER TABLE customer ADD pin_number text COLLATE utf8_bin AFTER password ALTER TABLE customer ADD notes text COLLATE utf8_bin AFTER bank_number ALTER TABLE customer ADD last_active datetime NOT NULL DEFAULT '0000-00-00 00:00:00' AFTER date_added

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• How does one use dynamic recompilation?

  - by acidzombie24

  It came to my attention some emulators and virtual machines use dynamic recompilation. How do they do that? In C i know how to call a function in ram using typecasting (although i never tried) but how does one read opcodes and generate code for it? Does the person need to have premade assembly chunks and copy/batch them together? is the assembly written in C? If so how do you find the length of the code? How do you account for system interrupts?

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• make website page get news articles from feeds

  - by Andy

  Hi, I would like to start publishing some news articles from time to time. An option would be to create a new web page for every article but this sounds like it can be done easier. For instance I noticed clear channel uses some kind of feed, like: http://www.z100.com/cc-common/news/sections/newsarticle.html?feed=104650&article=7011404 I don't know what it means and how it works but looks like a nice way to get the article from some kind of database I guess? Does someone knows how this works, or some other way to create new articles etc, some dynamical functionality for instance to generate links to the articles and get the right article from a database for example. thanks!

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• jQuery Sortable + Droppable z-index problem

  - by unknowndomain

  I am having a probelm with the z-index of my sortable object not being above my droppable. If you visit http://clareshilland.unknowndomain.co.uk/. Press Ctrl + L to bring up the login screen. Enter the username clare and the password shilland. It will then load in the admin bar and if you click manage gallery. A pop down thumbnail view will appear with all the photos from that gallery. The issue is that when you drag the 'polaroids' from the grid to the delete area they are under the delete area. I tried putting the delete area inside the same div as the grid but it makes no difference, I just don't know what to do at this point so any help would be a massive help!

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• How to achieve multiple grids like the SQL server Results pane

  - by Skun

  Hi guys ! I'm having problems with my project once again :( The front end is C# I need to support multiline querying like MS SQL server and when these queries are executed, naturally there are going to be multiple result sets. Getting the datatables respective to the results is not a problem, but how do i make it appear like its done in MS SQL server. One result set below the other and with a scroll bar? Should i bind it to a datagrid? If so how can i bind multiple tables to a datagrid ? and will it generate the scrollbars and the columns automatically? If i am not clear, please let me know and i'll try to be more clearer. ps: If anyone knows how this can be done with the XtraGridControl in devexpress that would be awesome ! :D

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• Protect Plesk login page from search engine eyes

  - by Iman Samizadeh

  Hi Folks, I was wondering if would it be possible to protect the "https://www.DOMAIN.com:8443" URL from search engines listing perhaps using the htaccess to redirect the 8443 port from "DOMAIN" to elsewhere? This is the VZPP Plesk - Login Login to Plesk. Please enter your login information. Username. Password. Interface Language. User Default, ENGLISH (United States), GERMAN (Germany) ... https://www.DOMAIN.com:8443/ - Many Thanks.

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• cannot access a site from Mac OSX Lion but can from other machines on network?

  - by house9

  SOLVED: The issue is with the hamachi client, hamachi is hi-jacking all of the 5.0.0.0/8 address block http://en.wikipedia.org/wiki/Hamachi_(software)#Criticism http://b.logme.in/2012/11/07/changes-to-hamachi-on-november-19th/ The fix on Mac LogMeIn Hamachi Preferences Settings Advanced Peer Connections IP protocol mode IPv6 only (default is both) If you can only connect to some of your network over IPv4 this 'fix' will NOT work for you ----- A few weeks ago I started using a service - https://semaphoreapp.com I think they made DNS changes a week ago and ever since I cannot access the site from my Mac OSX Lion (10.7.4) machine (my main development machine) but I can access the site from other machines on my network ipad windows machine MacMini (10.6.8) After some google searching I tried both of these dscacheutil -flushcache sudo killall -HUP mDNSResponder but no go, I've contacted semaphoreapp as well, but nothing so far - also of interest, one of my colleagues has the exact same problem, cannot access via Mac OSX Lion but can via windows machine, we work remotely and are not on the same ISP some additional info Lion (10.7.4) cannot access site host semaphoreapp.com semaphoreapp.com has address 5.9.53.16 ping semaphoreapp.com PING semaphoreapp.com (5.9.53.16): 56 data bytes Request timeout for icmp_seq 0 Request timeout for icmp_seq 1 Request timeout for icmp_seq 2 Request timeout for icmp_seq 3 ping: sendto: No route to host Request timeout for icmp_seq 4 ping: sendto: Host is down Request timeout for icmp_seq 5 ping: sendto: Host is down Request timeout for icmp_seq 6 ping: sendto: Host is down Request timeout for icmp_seq 7 .... traceroute semaphoreapp.com traceroute to semaphoreapp.com (5.9.53.16), 64 hops max, 52 byte packets 1 * * * 2 * * * traceroute: sendto: No route to host 3 traceroute: wrote semaphoreapp.com 52 chars, ret=-1 *traceroute: sendto: Host is down traceroute: wrote semaphoreapp.com 52 chars, ret=-1 .... and MacMini (10.6.8) can access it host semaphoreapp.com semaphoreapp.com has address 5.9.53.16 ping semaphoreapp.com PING semaphoreapp.com (5.9.53.16): 56 data bytes 64 bytes from 5.9.53.16: icmp_seq=0 ttl=44 time=191.458 ms 64 bytes from 5.9.53.16: icmp_seq=1 ttl=44 time=202.923 ms 64 bytes from 5.9.53.16: icmp_seq=2 ttl=44 time=180.746 ms 64 bytes from 5.9.53.16: icmp_seq=3 ttl=44 time=200.616 ms 64 bytes from 5.9.53.16: icmp_seq=4 ttl=44 time=178.818 ms .... traceroute semaphoreapp.com traceroute to semaphoreapp.com (5.9.53.16), 64 hops max, 52 byte packets 1 192.168.0.1 (192.168.0.1) 1.677 ms 1.446 ms 1.445 ms 2 * LOCAL ISP 11.957 ms * 3 etc... 10.704 ms 14.183 ms 9.341 ms 4 etc... 32.641 ms 12.147 ms 10.850 ms 5 etc.... 44.205 ms 54.563 ms 36.243 ms 6 vlan139.car1.seattle1.level3.net (4.53.145.165) 50.136 ms 45.873 ms 30.396 ms 7 ae-32-52.ebr2.seattle1.level3.net (4.69.147.182) 31.926 ms 40.507 ms 49.993 ms 8 ae-2-2.ebr2.denver1.level3.net (4.69.132.54) 78.129 ms 59.674 ms 49.905 ms 9 ae-3-3.ebr1.chicago2.level3.net (4.69.132.62) 99.019 ms 82.008 ms 76.074 ms 10 ae-1-100.ebr2.chicago2.level3.net (4.69.132.114) 96.185 ms 75.658 ms 75.662 ms 11 ae-6-6.ebr2.washington12.level3.net (4.69.148.145) 104.322 ms 105.563 ms 118.480 ms 12 ae-5-5.ebr2.washington1.level3.net (4.69.143.221) 93.646 ms 99.423 ms 96.067 ms 13 ae-41-41.ebr2.paris1.level3.net (4.69.137.49) 177.744 ms ae-44-44.ebr2.paris1.level3.net (4.69.137.61) 199.363 ms 198.405 ms 14 ae-47-47.ebr1.frankfurt1.level3.net (4.69.143.141) 176.876 ms ae-45-45.ebr1.frankfurt1.level3.net (4.69.143.133) 170.994 ms ae-46-46.ebr1.frankfurt1.level3.net (4.69.143.137) 177.308 ms 15 ae-61-61.csw1.frankfurt1.level3.net (4.69.140.2) 176.769 ms ae-91-91.csw4.frankfurt1.level3.net (4.69.140.14) 178.676 ms 173.644 ms 16 ae-2-70.edge7.frankfurt1.level3.net (4.69.154.75) 180.407 ms ae-3-80.edge7.frankfurt1.level3.net (4.69.154.139) 174.861 ms 176.578 ms 17 as33891-net.edge7.frankfurt1.level3.net (195.16.162.94) 175.448 ms 185.658 ms 177.081 ms 18 hos-bb1.juniper4.rz16.hetzner.de (213.239.240.202) 188.700 ms 190.332 ms 188.196 ms 19 hos-tr4.ex3k14.rz16.hetzner.de (213.239.233.98) 199.632 ms hos-tr3.ex3k14.rz16.hetzner.de (213.239.233.66) 185.938 ms hos-tr2.ex3k14.rz16.hetzner.de (213.239.230.34) 182.378 ms 20 * * * 21 * * * 22 * * * any ideas? EDIT: adding tcpdump MacMini (which can connect) while running - ping semaphoreapp.com sudo tcpdump -v -i en0 dst semaphoreapp.com Password: tcpdump: listening on en0, link-type EN10MB (Ethernet), capture size 65535 bytes 17:33:03.337165 IP (tos 0x0, ttl 64, id 20153, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->3129)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 0, length 64 17:33:04.337279 IP (tos 0x0, ttl 64, id 26049, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->1a21)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 1, length 64 17:33:05.337425 IP (tos 0x0, ttl 64, id 47854, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->c4f3)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 2, length 64 17:33:06.337548 IP (tos 0x0, ttl 64, id 24772, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->1f1e)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 3, length 64 17:33:07.337670 IP (tos 0x0, ttl 64, id 8171, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->5ff7)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 4, length 64 17:33:08.337816 IP (tos 0x0, ttl 64, id 35810, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->f3ff)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 5, length 64 17:33:09.337948 IP (tos 0x0, ttl 64, id 31120, offset 0, flags [none], proto ICMP (1), length 84, bad cksum 0 (->652)!) 192.168.0.6 > static.16.53.9.5.clients.your-server.de: ICMP echo request, id 61918, seq 6, length 64 ^C 7 packets captured 1047 packets received by filter 0 packets dropped by kernel OSX Lion (cannot connect) while running - ping semaphoreapp.com # wireless ~ $ sudo tcpdump -v -i en1 dst semaphoreapp.com Password: tcpdump: listening on en1, link-type EN10MB (Ethernet), capture size 65535 bytes ^C 0 packets captured 262 packets received by filter 0 packets dropped by kernel and # wired ~ $ sudo tcpdump -v -i en0 dst semaphoreapp.com tcpdump: listening on en0, link-type EN10MB (Ethernet), capture size 65535 bytes ^C 0 packets captured 219 packets received by filter 0 packets dropped by kernel above output after Request timeout for icmp_seq 25 or 30 times from ping. I don't know much about tcpdump, but to me it doesn't seem like the ping requests are leaving my machine?

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• Flash and ActionScript

  - by Sonesh Dabhi

  I am not a flash/actionscript developer and I need to achieve a very small task in flash . I need to display user audio input level in flash . I found that I can do that using action script as below . I also checked this link . I have no idea what tools I need to use and generate a swf file . Any help highly appreciated . this.mic = Microphone.getMicrophone(); this.micTimer.addEventListener(TimerEvent.TIMER,this.timerHandler); this.micTimer.start(); this.mic.setLoopBack(true); return; public function timerHandler(event:TimerEvent):void { this.micVolume.setProgress(this.mic.activityLevel,100) return; }

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• Using PIG with Hadoop, how do I regex match parts of text with an unknown number of groups?

  - by lmonson

  I'm using Amazon's elastic map reduce. I have log files that look something like this random text foo="1" more random text foo="2" more text noise foo="1" blah blah blah foo="1" blah blah foo="3" blah blah foo="4" ... How can I write a pig expression to pick out all the numbers in the 'foo' expressions? I prefer tuples that look something like this: (1,2) (1) (1,3,4) I've tried the following: TUPLES = foreach LINES generate FLATTEN(EXTRACT(line,'foo="([0-9]+)"')); But this yields only the first match in each line: (1) (1) (1)

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• Techniques to avoid DeadlineExceededException in GAE/J?

  - by Tahir Akram

  I am developing an Twitter4J web application in Google App Engine/Java. I need to show two lists. One is Twitter friends and other is followers. With photo and screen name. It is working fine for people who have 20-30 followers and friends. But it gave me DeadlineExceededException when I try a user who has 150+ followers and friends. GAE throws this exception if web request take time more than 30 seconds. So what techniques I can adopt to avoid this exception. Should I generate two AJAX calls for each of my list. After page loads. So that every call will have its own 30 secs limit? Or what else you think? I am gone make it. Please help.

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• Django, CSRF protection and js generated form

  - by Neewok

  I have to create a form dynamically via javascript (yeah, that sounds ugly, but read this for the reason) and wants to make its submission CSRF proof. Usually, I use the @csrf_protect decorator in my views, and the {% csrf_token %} tag in my templates, as recommanded in the doc. But what should I do with a client-side generated form ? If I add a '/get_token/' view to generate a token on the server and obtain its value (say, via JSONP), then that means that I'm creating a backdoor an attacker could use to bypass the protection. Kinda head-scratching. What would you recommand ?

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• Best tool to check and ensure PDF/A compatibility under Linux

  - by Sven Lilienthal

  I am working on an online portal, where researchers can upload their research papers. One requirement is, that all PDFs are stored in PDF/A-format. As I can't rely on the users to generate PDF/A conforming documents, I need a tool to check and convert standard PDFs into PDF/A format. What is the best tool you know of? Price Quality Speed Available APIs Open-source tools would be prefered, but a search revealed none. iText can create PDF/a, but converting isn't easy to do, as you have to read every page and copy it to a new document, losing all bookmarks and annotations in this process. (At least as far as I know, if you know of an easy solution, let me know). APIs should be available for either PHP, Java or a command-line-tool should be provided. Please do not list either GUI-only or Online-only solutions.

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• Lack of IsNumeric function in C#

  - by Michael Kniskern

  One thing that has bothered me about C# since its release was the lack of a generic IsNumeric function. I know it is difficult to generate a one-stop solution to detrmine if a value is numeric. I have used the following solution in the past, but it is not the best practice because I am generating an exception to determine if the value is IsNumeric: public bool IsNumeric(string input) { try { int.Parse(input); return true; } catch { return false; } } Is this still the best way to approach this problem or is there a more efficient way to determine if a value is numeric in C#?

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• Test wordpress sites for SQL Injection on siteurl

  - by Scott B

  I have a client who's wordpress sites have gotten hacked twice by iframe scammers. Each time they've injected iframe code into the content of the sites. This last time, today, they simply changed the siteurl in wp_options to their iframe code. The result was obvious and appeared to simply botch the paths of the scripts that rely on I can't determine if its a password compromise (on FTP or WordPress itself) or a SQL injection to alter siteurl. Since the only thing that was altered is siteurl, I'm thinking perhaps SQL Injection. What are your thoughts? Any way to scan a site for potential SQL injection vulnerabilities? The only active plugins on the site are contact form 7 and google xml sitemaps.

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• Display continuous dates in Pivot Chart

  - by Douglas

  I have a set of data in a pivot table with date times and events. I've made a pivot chart with this data, and grouped the data by day and year, then display a count of events for each day. So, my horizontal axis goes from 19 March 2007 to 11 May 2010, and my vertical axis is numeric, going from zero to 140. For some days, I have zero events. These days don't seem to be shown on the horizontal axis, so 2008 is narrower than 2009. How do I display a count of zero for days with no events? I'd like my horizontal axis to be continuous, so that it does not miss any days, and every month ends up taking up the same amount of horizontal space. (This question is similar to the unanswered question here, but I'd rather not generate a table of all the days in the last x number of years just to get a smooth plot!)

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• Is man-in-the-middle attack a security threat during SSH authentication using keys?

  - by JP19

  Hi, I am no expert in network security, so pardon if this question is not very smart :). I am automating logins to some machines using ssh. I am currently avoiding host-key warnings using StrictHostKeyChecking no. I naively understand that someone can impersonate as the server and I risk losing my password to him if that were the case. However, if I am using only public/private Key based authentication ( using PasswordAuthentication no ), can the intruder still cause harm? So basically, with ssh -o "StrictHostKeyChecking no" -o "PasswordAuthentication no" : 1) Can the intruder decipher my private key? 2) Are there any other security threats? regards, JP

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