compiling numpy with sunperf atlas libraries
- by user288558
I would like to use the sunperf libraries when compiling scipy and numpy. I tried using setupscons.py which seems to check from SUNPERF libraries, but it didnt recognize where mine are: here is a listing of /pkg/linux/SS12/sunstudio12.1 (thats where the sunperf library lives):
wkerzend@mosura:/home/wkerzend>ls /pkg/linux/SS12/sunstudio12.1/lib/
CCios/ libdbx_agent.so@ libsunperf.so.3@
amd64/ libfcollector.so@ libtha.so@
collector.jar@ libfsu.so@ libtha.so.1@
dbxrc@ libfsu.so.1@ locale/
debugging.so@ libfui.so@ make.rules@
er.rc@ libfui.so.1@ rw7/
libblacs_openmpi.so@ librtc.so@ sse2/
libblacs_openmpi.so.1@ libscalapack.so@ stlport4/
libcollectorAPI.so@ libscalapack.so.1@ svr4.make.rules@
libcollectorAPI.so.1@ libsunperf.so@ tools_svc_mgr@
I tried to specify this directory in sites.cfg, but I still get the following errors:
Checking if g77 needs dummy main - MAIN__.
Checking g77 name mangling - '_', '', lower-case.
Checking g77 C compatibility runtime ...-L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 - L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat- linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 -lfrtbegin -lg2c -lm
Checking MKL ... Failed (could not check header(s) : check config.log in build/scons/scipy/integrate for more details)
Checking ATLAS ... Failed (could not check header(s) : check config.log in build/scons/scipy/integrate for more details)
Checking SUNPERF ... Failed (could not check symbol cblas_sgemm : check config.log in build/scons/scipy/integrate for more details))
Checking Generic BLAS ... yes
Checking for BLAS (Generic BLAS) ... Failed: BLAS (Generic BLAS) test could not be linked and run
Exception: Could not find F77 BLAS, needed for integrate package:
File "/priv/manana1/wkerzend/install_dir/scipy-0.7.1/scipy/integrate/SConstruct", line 2:
GetInitEnvironment(ARGUMENTS).DistutilsSConscript('SConscript')
File "/home/wkerzend/python_coala/numscons-0.10.1-py2.6.egg/numscons/core/numpyenv.py", line 108:
build_dir = '$build_dir', src_dir = '$src_dir')
File "/priv/manana1/wkerzend/python_coala/numscons-0.10.1-py2.6.egg/numscons/scons-local/scons-local-1.2.0/SCons/Script/SConscript.py", line 549:
return apply(_SConscript, [self.fs,] + files, subst_kw)
File "/priv/manana1/wkerzend/python_coala/numscons-0.10.1-py2.6.egg/numscons/scons-local/scons-local-1.2.0/SCons/Script/SConscript.py", line 259:
exec _file_ in call_stack[-1].globals
File "/priv/manana1/wkerzend/install_dir/scipy-0.7.1/build/scons/scipy/integrate/SConscript", line 15:
raise Exception("Could not find F77 BLAS, needed for integrate package")
error: Error while executing scons command. See above for more information.
If you think it is a problem in numscons, you can also try executing the scons
command with --log-level option for more detailed output of what numscons is
doing, for example --log-level=0; the lowest the level is, the more detailed
the output it.-----
any help is appreciated
Wolfgang
