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• Can MySQL reasonably perform queries on billions of rows?

  - by haxney

  I am planning on storing scans from a mass spectrometer in a MySQL database and would like to know whether storing and analyzing this amount of data is remotely feasible. I know performance varies wildly depending on the environment, but I'm looking for the rough order of magnitude: will queries take 5 days or 5 milliseconds? Input format Each input file contains a single run of the spectrometer; each run is comprised of a set of scans, and each scan has an ordered array of datapoints. There is a bit of metadata, but the majority of the file is comprised of arrays 32- or 64-bit ints or floats. Host system |----------------+-------------------------------| | OS | Windows 2008 64-bit | | MySQL version | 5.5.24 (x86_64) | | CPU | 2x Xeon E5420 (8 cores total) | | RAM | 8GB | | SSD filesystem | 500 GiB | | HDD RAID | 12 TiB | |----------------+-------------------------------| There are some other services running on the server using negligible processor time. File statistics |------------------+--------------| | number of files | ~16,000 | | total size | 1.3 TiB | | min size | 0 bytes | | max size | 12 GiB | | mean | 800 MiB | | median | 500 MiB | | total datapoints | ~200 billion | |------------------+--------------| The total number of datapoints is a very rough estimate. Proposed schema I'm planning on doing things "right" (i.e. normalizing the data like crazy) and so would have a runs table, a spectra table with a foreign key to runs, and a datapoints table with a foreign key to spectra. The 200 Billion datapoint question I am going to be analyzing across multiple spectra and possibly even multiple runs, resulting in queries which could touch millions of rows. Assuming I index everything properly (which is a topic for another question) and am not trying to shuffle hundreds of MiB across the network, is it remotely plausible for MySQL to handle this? UPDATE: additional info The scan data will be coming from files in the XML-based mzML format. The meat of this format is in the <binaryDataArrayList> elements where the data is stored. Each scan produces = 2 <binaryDataArray> elements which, taken together, form a 2-dimensional (or more) array of the form [[123.456, 234.567, ...], ...]. These data are write-once, so update performance and transaction safety are not concerns. My naïve plan for a database schema is: runs table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | start_time | TIMESTAMP | | name | VARCHAR | |-------------+-------------| spectra table | column name | type | |----------------+-------------| | id | PRIMARY KEY | | name | VARCHAR | | index | INT | | spectrum_type | INT | | representation | INT | | run_id | FOREIGN KEY | |----------------+-------------| datapoints table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | spectrum_id | FOREIGN KEY | | mz | DOUBLE | | num_counts | DOUBLE | | index | INT | |-------------+-------------| Is this reasonable?

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• Custom configuration file custom_config.js not working?

  - by nanoquetz9l

  Hello gals/guys, I am trying to use a custom configuration file instead of the default config.js file in the ckeditor root. I have placed a renamed copy of the config.js file in my webroot and call it with customConfig. It is not working for me though. Is my syntax creating any issues? I used the dev docs site as a ref: http://docs.cksource.com/CKEditor_3.x/D ... igurations Any ides or comments will really help me out. Im stuck. Thanks!! nano <p></p> CKEDITOR.replace( 'ticket_text' ); CKEDITOR.replace( 'ticket_text1', { customConfig : '/ckeditor/custom_config.js' });

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• last day of the current month?

  - by Surya sasidhar

  hi, i have to get the last day of the current month. how can i get

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• Does introducing foreign keys to MySQL reduce performance

  - by Tam

  I'm building Ruby on Rails 2.3.5 app. By default, Ruby on Rails doesn't provide foreign key contraints so I have to do it manually. I was wondering if introducing foreign keys reduces query performance on the database side enough to make it not worth doing. Performance in this case is my first priority as I can check for data consistency with code. What is your recommendation in general? do you recommend using foreign keys? and how do you suggest I should measure this?

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• c# finding matching words in table column using Linq2Sql

  - by David Liddle

  I am trying to use Linq2Sql to return all rows that contain values from a list of strings. The linq2sql class object has a string property that contains words separated by spaces. public class MyObject { public string MyProperty { get; set; } } Example MyProperty values are: MyObject1.MyProperty = "text1 text2 text3 text4" MyObject2.MyProperty = "text2" For example, using a string collection, I pass the below list var list = new List<>() { "text2", "text4" } This would return both items in my example above as they both contain "text2" value. I attempted the following using the below code however, because of my extension method the Linq2Sql cannot be evaluated. public static IQueryable<MyObject> WithProperty(this IQueryable<MyProperty> qry, IList<string> p) { return from t in qry where t.MyProperty.Contains(p, ' ') select t; } I also wrote an extension method public static bool Contains(this string str, IList<string> list, char seperator) { if (String.IsNullOrEmpty(str) || list == null) return false; var splitStr = str.Split(new char[] { seperator }, StringSplitOptions.RemoveEmptyEntries); foreach (string s in splitStr) foreach (string l in list) if (String.Compare(s, l, true) == 0) return true; return false; } Any help or ideas on how I could achieve this?

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• Reading from an write-only(OUT) parameter in pl/sql

  - by sqlgrasshopper5

  When I tried writing to an read-only parameter(IN) of a function, Oracle complains with an error. But that is not the case when reading from an write-only(OUT) parameter of a function. Oracle silently allows this without any error. What is the reason for this behaviour?. The following code executes without any assignment happening to "so" variable: create or replace function foo(a OUT number) return number is so number; begin so := a; --no assignment happens here a := 42; dbms_output.put_line('HiYA there'); dbms_output.put_line('VAlue:' || so); return 5; end; / declare somevar number; a number := 6; begin dbms_output.put_line('Before a:'|| a); somevar := foo(a); dbms_output.put_line('After a:' || a); end; / Here's the output I got: Before a:6 HiYA there VAlue: After a:42

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• Service Broker not working after database restore

  - by roryok

  Have a working Service Broker set up on a server, we're in the process of moving to a new server but I can't seem to get Service Broker set up on the new box. Have done the obvious (to me) things like Enabling Broker on the DB, dropping the route, services, contract, queues and even message type and re adding them, setting ALTER QUEUE with STATUS ON SELECT * FROM sys.service_queues gives me a list of the queues, including my own two, which show as activation_enabled, receive_enabled etc. Needless to say the queues aren't working. When I drop messages into them nothing goes in and nothing comes out. Any ideas? I'm sure there's something really obvious I've missed...

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• mysql: get all rows into 1 column

  - by andufo

  hi, i have 3 tables: post (id_post, title) tag (id_tag, name) post_tag (id_post_tag, id_post, id_tag) Lets suppose that id_post 3 has 4 linked tags 1,2,3,4 (soccer, basket, tennis and golf). Is there a way to return something like this in ONE row? col 1 id_post = 3 col 2 tags = soccer basket tennis golf Thanks

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• Databinding expression for retrieving value of related collection using LINQ

  - by joshb

  I have a GridView that is bound to a LINQDataSource control that is returning a collection of customers. Within my DataGrid I need to display the home phone number of a customer, if they have one. The phone numbers of a customer are stored in a separate table with a foreign key pointing to the customer table. The following binding expression gets me the first phone number for a customer: <asp:TemplateField HeaderText="LastName" SortExpression="LastName"> <ItemTemplate> <asp:Label ID="PhoneLabel" runat="server" Text='<%# Eval("Phones[0].PhoneNumber") %>'></asp:Label> </ItemTemplate> </asp:TemplateField> I need to figure out how to get the home phone number specifically (filter based on phone type) and handle the scenario where the customer does not have a home phone in the database. Right now it's throwing an out of range exception if the customer does not have any phone numbers. I've tried using the Where operator with a lambda expression to filter the phone type but it doesn't work: <%# Eval("Phones.Where(p => p.PhoneTypeId == 2).PhoneNumber") %> Solutions or links to any good articles on the subject would be much appreciated.

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• Must read resources for NoSQL developers.

  - by Little Jeans

  Can you recommend any resources every NoSQL developer should be familiar with?

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• Incorrect syntax near ')' calling storedproc with GETDATE

  - by Nat

  Maybe I am having a moment of 'afternoon', but can anyone explain why I get Msg 102, Level 15, State 1, Line 2 Incorrect syntax near ')'. When running CREATE PROC DisplayDate ( @DateVar DATETIME ) AS BEGIN SELECT @DateVar END GO EXEC DisplayDate GETDATE();

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• mysql count rows and grop them by month

  - by user2661296

  I have a table called cc_calls and there I have many call records I want to count them and group them in months I have a timestamp called starttime and I can use that row to extract the month, also limit the count for 12 months the results should be like: Month Count January 768768 February 876786 March 987979 April 765765 May 898797 June 876876 July 786575 August 765765 September 689787 October 765879 November 897989 December 876876 Can anyone guide me or show me the mysql query that I need to get this result.

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• Error using iif in ms access query

  - by naveen

  I am trying to fire this query in MS Access SELECT file_number, IIF(invoice_type='Spent on Coding',SUM(CINT(invoice_amount)), 0) as CodingExpense FROM invoice GROUP BY file_number I am getting this error Error in list of function arguments: '=' not recognized. Unable to parse query text. I tried replacing IIF with SWITCH to no avail. What's wrong with my query and how to correct this?

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• How to retrieve last primary Id from mdb's table?

  - by William

  I got table with next columns: Id, Name, Age, Class I am trying to insert new row in db like this: INSERT INTO MyTable (Name, Age, Class) VALUES (@name, @age, @class) And get an exeption: "Index or primary key cannot contain a Null value." The question is how to add a new row without knowing next primary Id, or maybe there is a way to get this Id from the table with the help of another query ?

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• Firebird: assign id to existing rows from newly added generator

  - by Aldo

  hello everyone, i have a table whixh contains some rows and dows not have a primary key. I want to add one now, but, is it possible for the existing rows to get an id from the newly added primary key? Dbms: firebird

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• How to do INSERT into a table records extracted from another table

  - by Martin

  I'm trying to write a query that extracts and transforms data from a table and then insert those data into another table. Yes, this is a data warehousing query and I'm doing it in MS Access. So basically I want some query like this: INSERT INTO Table2(LongIntColumn2, CurrencyColumn2) VALUES (SELECT LongIntColumn1, Avg(CurrencyColumn) as CurrencyColumn1 FROM Table1 GROUP BY LongIntColumn1); I tried but get a syntax error message. What would you do if you want to do this?

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• Choosing between a union and a boolean condition

  - by bread

  Does this require a UNION? SELECT vend_id, prod_id, prod_price FROM products WHERE prod_price <= 5 UNION SELECT vend_id, prod_id, prod_price FROM products WHERE vend_id IN (1001,1002); Or is it the same if you do it this way? SELECT vend_id, prod_id, prod_price FROM products WHERE prod_price <= 5 OR vend_id IN (1001,1002);

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• is it possible to make an EXE out of an access form?

  - by every_answer_gets_a_point

  i would like the user to think he's using a regular winform, but in the backend i want to have access handle the DB stuff. is it possible to just use the access form and have everything else disappear in the background? can we make an exe out of the form?

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• How to use database to generate multiple folder content page?

  - by VenomVipes

  Scenario :I am trying to build a Mobile Entertainment Portal. It will enable users to download Music & Movies to their Cell Phones... Problem Exp : Suppose I upload 100 folders of Songs, each folder is for one Album. I want a way to generate a page with all the folders name (Album Name) in it. If user click on the page, they should be taken to a page where they get list of all songs in the album. Clicking on any song name will let them download it. Can it be done anyway or will I have to manually design each of the 3 pages for each album. If I do that, its time consuming and also will be difficult to change anything like footer, header...

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• How to use SQL trigger to record the affected column's row number

  - by Freeman

  I want to have an 'updateinfo' table in order to record every update/insert/delete operations on another table. In oracle I've written this: CREATE TABLE updateinfo ( rnumber NUMBER(10), tablename VARCHAR2(100 BYTE), action VARCHAR2(100 BYTE), UPDATE_DATE date ) DROP TRIGGER TRI_TABLE; CREATE OR REPLACE TRIGGER TRI_TABLE AFTER DELETE OR INSERT OR UPDATE ON demo REFERENCING NEW AS NEW OLD AS OLD FOR EACH ROW BEGIN if inserting then insert into updateinfo(rnumber,tablename,action,update_date ) values(rownum,'demo', 'insert',sysdate); elsif updating then insert into updateinfo(rnumber,tablename,action,update_date ) values(rownum,'demo', 'update',sysdate); elsif deleting then insert into updateinfo(rnumber,tablename,action,update_date ) values(rownum,'demo', 'delete',sysdate); end if; -- EXCEPTION -- WHEN OTHERS THEN -- Consider logging the error and then re-raise -- RAISE; END TRI_TABLE; but when checking updateinfo, all rnumber column is zero. is there anyway to retrieve the correct row number?

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• Ways to implement tags - pros and cons of each

  - by bobobobo

  Related Using SO as an example, what is the most sensible way to manage tags if you anticipate they will change often? Way 1: Seriously denormalized (comma delimited) table posts +--------+-----------------+ | postId | tags | +--------+-----------------+ | 1 | c++,search,code | Here tags are comma delimited. Pros: Tags are retrieved at once with a single select query. Updating tags is simple. Easy and cheap to update. Cons: Extra parsing on tag retrieval, difficult to count how many posts use which tags. (alternatively, if limited to something like 5 tags) table posts +--------+-------+-------+-------+-------+-------+ | postId | tag_1 | tag_2 | tag_3 | tag_4 | tag_5 | +--------+-------+-------+-------+-------+-------+ | 1 | c++ |search | code | | | Way 2: "Slightly normalized" (separate table, no intersection) table posts +--------+-------------------+ | postId | title | +--------+-------------------+ | 1 | How do u tag? | table taggings +--------+---------+ | postId | tagName | +--------+---------+ | 1 | C++ | | 1 | search | Pros: Easy to see tag counts (count(*) from taggings where tagName='C++'). Cons: tagName will likely be repeated many, many times. Way 3: The cool kid's (normalized with intersection table) table posts +--------+---------------------------------------+ | postId | title | +--------+---------------------------------------+ | 1 | Why is a raven like a writing desk? | table tags +--------+---------+ | tagId | tagName | +--------+---------+ | 1 | C++ | | 2 | search | | 3 | foofle | table taggings +--------+---------+ | postId | tagId | +--------+---------+ | 1 | 1 | | 1 | 2 | | 1 | 3 | Pros: No repeating tag names. More girls will like you. Cons: More expensive to change tags than way #1.

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• How do I drop a foerign key in mssql?

  - by mmattax

  I have created a foreign key (in mssql / tsql) by: alter table company add CountryID varchar(3); alter table company add constraint Company_CountryID_FK foreign key(CountryID) references Country; I then run this query: alter table company drop column CountryID; and I get this error: Msg 5074, Level 16, State 4, Line 2 The object 'Company_CountryID_FK' is dependent on column 'CountryID'. Msg 4922, Level 16, State 9, Line 2 ALTER TABLE DROP COLUMN CountryID failed because one or more objects access this column. I have tried this, yet it does not seem to work: alter table company drop foreign key Company_CountryID_FK; alter table company drop column CountryID; What do I need to do to drop the CountryID column? Thanks.

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• Any way to optimize this MySQL query?

  - by manyxcxi

  My table looks like this: `MyDB`.`Details` ( `id` bigint(20) NOT NULL, `run_id` int(11) NOT NULL, `element_name` varchar(255) NOT NULL, `value` text, `line_order` int(11) default NULL, `column_order` int(11) default NULL ); I have the following SELECT statement in a stored procedure SELECT RULE ,TITLE ,SUM(IF(t.PASSED='Y',1,0)) AS PASS ,SUM(IF(t.PASSED='N',1,0)) AS FAIL FROM ( SELECT a.line_order ,MAX(CASE WHEN a.element_name = 'PASSED' THEN a.`value` END) AS PASSED ,MAX(CASE WHEN a.element_name = 'RULE' THEN a.`value` END) AS RULE ,MAX(CASE WHEN a.element_name = 'TITLE' THEN a.`value` END) AS TITLE FROM Details a WHERE run_id = runId GROUP BY line_order ) t GROUP BY RULE, TITLE; *runId is an input parameter to the stored procedure. This query takes about 14 seconds to run. The table has 214856 rows, and the particular run_id I am filtering on has 162204 records. It's not on a super high power machine, but I feel like I could be doing this more efficiently. My main goal is to summarize by Rule and Title and show Pass and Fail count columns.

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• Filling a LOV in Oracle Apex based on data in another text box

  - by Martin Pugh

  I am fairly new to Oracle Apex, and have a problem. Our application currently has a method of entering data, with several text boxes and Optional List of Values. I would like to have an LOV based on information in another text box like so: select APPOINTMENT_ID PATIENT_ID from APPOINTMENT where PATIENT_ID = :P9_PAT_NUM where P9_PAT_NUM is a patient number in a text box. However, this would apparently only work if the text box has already been submitted, else it assumes the text box is null. Is there any way to get this working with an LOV, or perhaps some other method?

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• Why is this postgresql query so slow?

  - by user315975

  I'm no database expert, but I have enough knowledge to get myself into trouble, as is the case here. This query SELECT DISTINCT p.* FROM points p, areas a, contacts c WHERE ( p.latitude > 43.6511659465 AND p.latitude < 43.6711659465 AND p.longitude > -79.4677941889 AND p.longitude < -79.4477941889) AND p.resource_type = 'Contact' AND c.user_id = 6 is extremely slow. The points table has fewer than 2000 records, but it takes about 8 seconds to execute. There are indexes on the latitude and longitude columns. Removing the clause concering the resource_type and user_id make no difference. The latitude and longitude fields are both formatted as number(15,10) -- I need the precision for some calculations. There are many, many other queries in this project where points are compared, but no execution time problems. What's going on?

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