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  • unix How to compare two files and get results to third file?

    - by Martin Mocik
    I have two files 1st file is like this: www.example.com www.domain.com www.otherexample.com www.other-domain.com www.other-example.com www.exa-ample.com 2nd file is like this (numbers after ;;; are between 0-10): www.example.com;;;2 www.domain.com;;;5 www.other-domain;;;0 www.exa-ample.com;;;4 and i want compare these two files and output to third file like this: www.otherexample.com www.other-example.com Both files have large size (over 500mb)

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  • How can I return the number of rows affected in sqlplus to a shell script?

    - by jessica
    Here is my shell script: # Deletes data from the 'sample' table starting August 30, 2011. # This is done in stages with a 7 second break every # 2 seconds or so to free up the database for other users. # The message "Done." will be printed when there are # no database entries left to delete. user="*****" pass="*****" while(true); do starttime=`date +%s` while [[ $((`date +%s` - $starttime)) -lt 2 ]]; do sqlplus $user/$pass@//blabla <<EOF whenever sqlerror exit 1 delete from sample where sampletime >= to_date('08-30-2011','mm-dd-yyyy') and rownum <= 2; commit; EOF rows = ??? if [ $rows -eq 0 ] ; then echo "Done." exit 0; fi done sleep 7 done If there is no way to get the number of rows, maybe I can use an error code returned by sqlplus to figure out when to end the script? Any thoughts? Thank you!

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  • Formatting with echo command

    - by johannix
    The actual situation is a bit complicated, but the issue I'm running into is that I have an echo command within an eval command. Like so: $ eval echo 'keep my spacing' keep my spacing $ echo 'keep my spacing' keep my spacing I was wondering how I could keep eval from stripping my spacing so that the first command prints out the same message as the second...

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  • Unescpaing huge single-line string on Linux

    - by Lajos Nagy
    I ended up with a huge, single line string literal (don't ask me how) where everything is escaped (mostly), including new lines and double quotes. Problem is, I want the original string. The string is huge so I'm not even sure how to begin. Here's what I have: "This\n is \"nice\",\nain\'t it?" This is what I want: This is "nice", ain't it? Again, the problem is that other shell sensitive stuff is not escaped (like $, or !), and that the string is couple of megabytes.

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  • Force line-buffering of stdout when piping to tee

    - by houbysoft
    Usually, stdout is line-buffered. In other words, as long as your printf argument ends with a newline, you can expect the line to be printed instantly. This does not appear to hold when using a pipe to redirect to tee. I have a C++ program, a, that outputs strings, always \n-terminated, to stdout. When it is run by itself (./a), everything prints correctly and at the right time, as expected. However, if I pipe it to tee (./a | tee output.txt), it doesn't print anything until it quits, which defeats the purpose of using tee. I know that I could fix it by adding a fflush(stdout) after each printing operation in the C++ program. But is there a cleaner, easier way? Is there a command I can run, for example, that would force stdout to be line-buffered, even when using a pipe?

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  • CVS branch name from tag name

    - by Jamie
    I have a number of modules in CVS with different tags. How would I go about getting the name of the branch these tagged files exist on? I've tried checking out a file from the module using cvs co -r TAG and then doing cvs log but it appears to give me a list of all of the branches that the file exists on, rather than just a single branch name. Also this needs to be an automated process, so I can't use web based tools like viewvc to gather this info.

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  • Find directories not containing a specific directory

    - by Morgan ARR Allen
    Been searching around for a bit and cannot find a solution for this one. I guess I'm looking for a leaf-directory by name. In this example I'd like to get a list of directories call 'modules' that do NOT have a subdirectory called module. modules/package1/modules/spackage1 modules/package1/modules/spackage2 modules/package1/modules/spackage3/modules modules/package1/modules/spackage3/modules/spackage1 modules/package2/modules/ The list I desire would contain modules/package1/modules/spackage3/modules/ modules/package2/modules/ All the directories named module that do not have a subdirectory called module I started with trying something this with no luck find . -name modules \! -exec sh -c 'find -name modules' \; -exec works on exit code, okay lets pass the count as exit code find . -name modules -exec sh -c 'exit $(find {} -name modules|grep -n ""|tail -n1|cut -d: -f1)' \; This should take the count of each subdirectory called modules and exit with it. No such love.

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  • Can this be done by sed?

    - by SpawnCxy
    Hiall,I need to deal with a file which seems as follows: 1234 4343 5345345 53453 4343 And what I want to do is to execute follow command to the number of each line: grep $num1 ./somepath #get num1_res Then write $num1 and $num1_res to another file which will be: 1234 32 4343 234 5345345 349 53453 78 #...etc Any good solution by sed?Or some other simple way? Thanks.

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  • I have an Errno 13 Permission denied with subprocess in python

    - by wDroter
    The line with the issue is ret=subprocess.call(shlex.split(cmd)) cmd = /usr/share/java -cp pig-hadoop-conf-Simpsons:lib/pig-0.8.1-cdh3u1-core.jar:lib/hadoop-core-0.20.2-cdh3u1.jar org.apache.pig.Main -param func=cat -param from =foo.txt -x mapreduce fsFunc.pig The error is. File "./run_pig.py", line 157, in process ret=subprocess.call(shlex.split(cmd)) File "/usr/lib/python2.7/subprocess.py", line 493, in call return Popen(*popenargs, **kwargs).wait() File "/usr/lib/python2.7/subprocess.py", line 679, in __init__ errread, errwrite) File "/usr/lib/python2.7/subprocess.py", line 1249, in _execute_child raise child_exception OSError: [Errno 13] Permission denied Let me know if any more info is needed. Any help is appreciated. Thanks.

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  • How can I change the color of xterm titlebar?

    - by tellus55
    Hi, I want to automatically change the color of my xterm titlebar. I would like to put code into my .bashrc so that the color changes automatically (say depending on the directory I am in). I know how to change the prompt and also how to change the text displayed in the titlebar. My question is about the color of the titlebar. Right now the color is orangish. I am using Ubuntu. Thanks

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  • Using terminal to record/save a data stream

    - by jonhurlock
    I want to be able to save a data stream which i am returning using the curl command. I have tried using the cat command, and piping it the curl command, however i'm doing it wrong. The code im currently using is: cat > file.txt | curl http://datastream.com/data Any help would be appreciated.

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  • Best Practice: User generated HTML cleaning

    - by Martin
    I'm coding a WYSIWYG editor width designMode="on" on a iframe. The editor works fine and i store the code as is in the database. Before outputing the html i need to "clean" with php on the server-side to avoid cross-site-scripting and other scary things. Is there some sort of best practice on how to do this? What tags can be dangerous? UPDATE: Typo fixed, it's What You See Is What You Get. Nothing new :)

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  • How do I fix my Ruby installation

    - by Robin Fisher
    Hi all, I rather cleverly (or not in hindsight) installed RVM, which kept hanging whilst compiling Rubies. I have removed the .rvm directory but now my system has reverted to Ruby 1.8.7 i.e. when I type: ruby -v which ruby they both point to 1.8.7. How do I get the ruby command to point to my 1.9.1 installation, which is located in /usr/local/lib/ruby/1.9.1? I'm on OSX 10.6. Thanks Robin

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  • Sort command not working as expected

    - by user964689
    If anybody can help me to write a loop to iterate over files in a folder it would save me a huge amount of time. I think it must be quite a simple solution ,but I currently don't know how to nest a loop within a loop. So far I have this script: cd /folderlocation/ for i in `</textfile_containing_lines_to_iterate_through` do #size=`echo $i | perl -nE '/:([\d-]+)/ && say abs(eval $1)'` #echo "$size" zcat dataset | head -n 18 > temp"$i".vcf tabix dataset $i >> temp"$i".vcf vcftools --window-pi 1000000 --vcf temp10individuals"$i".vcf >> run_summary.txt cat out.windowed.pi >> outputfile_2 #rm temp* done grep -v "PI" outputfile_2 > outputfile rm outputfile_2 I need to expand this so that the script will run multiple times, through all of the 'textfiles_containing_lines_to_iterate_through'. Currently I change the name of the textfile manually each time and re-run the script. So I'd need a loop that does this for file in folder, and also that uses the name of the file as part of the outputfile name so that I can match an output file to an inputfile. Any help would be really useful and greatly appreciated! Many thanks in advance.

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  • cd Terminal at a given directory after running a Python script?

    - by Dave Everitt
    I'm working on a simple Python script that can use subprocess and/or os to execute some commands, which is working fine. However, when the script exits I'd like to cd the actual Terminal (in this case OS X) so on exit, the new files are ready to use in the directory where the have been created. All the following (subprocess.Popen, os.system, os.chdir) can do what I want from within the script (i.e. they execute stuff in the target directory) but on exit leave the Terminal at the script's own directory, not the target directory. I'd like to avoid writing a shell script to temporary file just to achieve this, if this is at all possible anyway?

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  • escape from a linux cli for loop

    - by aidan
    I'm doing something like this: for f in `find -iname '*.html'`; do scp $f remoteserver:$f; done; I've got through about 3 of the 1000 files and I've decided I want to abort the operation. CTRL+C only escapes the SCP login prompt and takes me to the next one, rather than escaping the for loop. Is there a better way than hitting CTRL+C 9997 times? Thanks!

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  • Redirect output from sed 's/c/d/' myFile to myFile

    - by sixtyfootersdude
    I am using sed in a script to do a replace and I want to have the replaced file overwrite the file. Normally I think that you would use this: % sed -i 's/cat/dog/' manipulate sed: illegal option -- i However as you can see my sed does not have that command. I tried this: % sed 's/cat/dog/' manipulate > manipulate But this just turns manipulate into an empty file (makes sense). This works: % sed 's/cat/dog/' manipulate > tmp; mv tmp manipulate But I was wondering if there was a standard way to redirect output into the same file that input was taken from.

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