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  • Converting FASTQ to FASTA with SED/AWK

    - by neversaint
    I have a data in that always comes in block of four in the following format (called FASTQ): @SRR018006.2016 GA2:6:1:20:650 length=36 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGN +SRR018006.2016 GA2:6:1:20:650 length=36 !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!+! @SRR018006.19405469 GA2:6:100:1793:611 length=36 ACCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC +SRR018006.19405469 GA2:6:100:1793:611 length=36 7);;).;);;/;*.2>/@@7;@77<..;)58)5/>/ Is there a simple sed/awk/bash way to convert them into this format (called FASTA): >SRR018006.2016 GA2:6:1:20:650 length=36 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGN >SRR018006.19405469 GA2:6:100:1793:611 length=36 ACCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC In principle we want to extract the first two lines in each block-of-4 and replace @ with >.

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  • Inheriting from class that inherits from DynamicObject

    - by SeveQ
    Hello there, I'm experimenting with C# 4.0's dynamic object model. I've created an abstract class named "Block" that inherits from DynamicObject. It overrides TryGetMember and TrySetMember. Furthermore I've created a usable class named "Brush" that inherits from "Block". I want it to be usable dynamically. But when I create a dynamic object from it and try to access a runtime bound member, it pelts me with an exception telling me that the member doesn't exist. The overridden TryGetMember or TrySetMember methods of the abstract parent class aren't getting called. Is this behaviour to be expected? Thank you!

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  • how to serialize / deserialize classes defined in .proto (protobuf)

    - by make
    Hi, Could someone please help me with serialization/deserialization classes defined in .proto (protobuf). here is an exp that I am trying to build: file.proto message Data{ required string x1 = 1; required uint32 x2 = 2; required float x3 = 3; } message DataExge { repeated Data data = 1; } client.cpp ... void serialize(const DataExge &data_snd){ try { ofstream ofs("DataExge"); data_snd.SerializeToOstream(&ofs); } catch(exception &e) { cerr << "serialize/exception: " << e.what() << endl; exit(1); } } void deserialize(DataExge &data_rec){ try { ifstream ifs("DataExge"); data_rec.ParseFromIstream(&ifs); } catch(exception& e) { cerr << "deserialize/exception: " << e.what() << endl; exit(1); } } int main(){ ... DataExge dataexge; Data *dat = dataexge.add_data(); char *y1 = "operation1"; uint32_t y2 = 123 ; float y3 = 3.14; // assigning data to send() dat->set_set_x1(y1); dat->set_set_x2(y2); dat->set_set_x3(y3); //sending data to the client serialize(dataexge); if (send(socket, &dataexge, sizeof(dataexge), 0) < 0) { cerr << "send() failed" ; exit(1); } //receiving data from the server deserialize(dataexge); if (recv(socket, &dataexge, sizeof(dataexge), 0) < 0) { cerr << "recv() failed"; exit(1); } //printing received data cout << dat->x1() << "\n"; cout << dat->x2() << "\n"; cout << dat->x3() << "\n"; ... } server.cpp ... void serialize(const DataExge &data_snd){ try { ofstream ofs("DataExge"); data_snd.SerializeToOstream(&ofs); } catch(exception &e) { cerr << "serialize/exception: " << e.what() << endl; exit(1); } } void deserialize(DataExge &data_rec){ try { ifstream ifs("DataExge"); data_rec.ParseFromIstream(&ifs); } catch(exception& e) { cerr << "deserialize/exception: " << e.what() << endl; exit(1); } } int main(){ ... DataExge dataexge; Data *dat = dataexge.add_data(); //receiving data from the client deserialize(dataexge); if (recv(socket, &dataexge, sizeof(dataexge), 0) < 0) { cerr << "recv() failed"; exit(1); } //printing received data cout << dat->x1() << "\n"; cout << dat->x2() << "\n"; cout << dat->x3() << "\n"; // assigning data to send() dat->set_set_x1("operation2"); dat->set_set_x2(dat->x2() + 1); dat->set_set_x3(dat->x3() + 1.1); //sending data to the client serialize(dataexge); //error// I am getting error at this line ... if (send(socket, &dataexge, sizeof(dataexge), 0) < 0) { cerr << "send() failed" ; exit(1); } ... } Thanks for your help and replies -

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  • IDisposable: is it necessary to check for null on finally {}?

    - by BlackTigerX
    In most examples that you find on the web when explicitly not using "using", the pattern looks something like: SqlConnection c = new SqlConnection(@"..."); try { c.Open(); ... } finally { if (c != null) //<== check for null c.Dispose(); } If you do use "using" and look at the generated IL code, you can see that it generates the check for null L_0024: ldloc.1 L_0025: ldnull L_0026: ceq L_0028: stloc.s CS$4$0000 L_002a: ldloc.s CS$4$0000 L_002c: brtrue.s L_0035 L_002e: ldloc.1 L_002f: callvirt instance void [mscorlib]System.IDisposable::Dispose() L_0034: nop L_0035: endfinally I understand why the IL gets translated to check for null (doesn't know what you did inside the using block), but if you're using try..finally and you have full control of how the IDisposable object gets used inside the try..finally block, do you really need to check for null? if so, why?

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  • How do I handle all the exceptions in a C# class where both ctor and finalizer throw exceptions?

    - by Frank
    How can I handle all exceptions for a class similar to the following under certain circumstances? class Test : IDisposable { public Test() { throw new Exception("Exception in ctor"); } public void Dispose() { throw new Exception("Exception in Dispose()"); } ~Test() { this.Dispose(); } } I tried this but it doesn't work: static void Main() { Test t = null; try { t = new Test(); } catch (Exception ex) { Console.Error.WriteLine(ex.Message); } // t is still null } I have also tried to use "using" but it does not handle the exception thrown from ~Test(); static void Main() { try { using (Test t = new Test()) { } } catch (Exception ex) { Console.Error.WriteLine(ex.Message); } } Any ideas how can I work around?

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  • Add inner-marging to a 4 columns CSS

    - by Martín Marconcini
    I am not a CSS expert (mainly because I haven’t had the need to use much HTML/CSS stuff lately), so I came up with the following style/divs to create a 4 column layout: <style type="text/css"> <!-- .columns:after { content: "."; display: block; height: 0; clear: both; visibility: hidden; } * html .columns {height: 1%;} .columns{ display:inline-block; } .columns{ display:block; } .columns .column{ float:left; overflow:hidden; display:inline; } .columns .last{ float:right; } .col4 .first{ left: auto;width:25%; } .col4 .second{ left: auto;width:25%; } .col4 .third{ left: auto;width:25%; } .col4 .last{ left: auto;width:25%; } --> </style> note: most of this stuff comes from this google result, I just adapted it to 4 columns. The HTML then looks like this: <div class="columns col4"> <div class="column first”> SOME TEXT </div><!-- /.first -—> <div class="column second”> MORE TEXT</div><!—- /.second -—> <div class="column third”> SOME MORE TEXT </div><!—- /.third --> <div class="column last”> SOME LAST TEXT </div><!-- /.last -—> </div><!-- /.columns --> Ok, I’ve simplified that a bit (there’s a small image and some < h2 text in there too) but the thing is that I’d like to add some space between the columns. Here’s how it looks now: Do you have any idea what CSS property should I touch? note: If I add margin or padding, one column shifts down because (as I understand it) it doesn’t fit. There might be other CSSs as well, since this came in a template (I have been asked for this change, but I didn’t do any of this, as usual). Thanks for any insight.

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  • Three Silverlight 4 issues

    - by Muhammad Jamal Shaikh
    Silverlight version : 4 Silverlight patter :MVVM Visual Studio template :Silverlight navigation application How do I block main navigation on (mainpage.xaml) as in any silverlight navigation application and block page's controls ( i.e whichever page is it in ) during async webservice calls? Any best practices? How do I deal with the browser's forward and backward buttons, specially during async calls? How do I deal with dialogs on the views ( e.g when using a childwindow to select a color). How should the color's picker control hex be communicated to the viewmodel?

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  • PHPTAL Nested Repeat

    - by 114343500565423229598
    Hello guys, I am having an problem trying to achieve a nested repeat in PHPTAL: <tr tal:repeat="business analysis_result"> <td>${business/trading_name}</td> <tal:block tal:repeat="selected_key selected_keys"> <td>HOW??????</td> <---problem </tal:block> </tr> basically I want to have the of inner repeat to get the value of $business[$selected_key], I have looked at the phptal manual which doesn't really give you a demo on how to do this... cheers guys! James

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  • Implementing ma? osx loop device driver.

    - by Inso Reiges
    Hello, I am aware that there is a native implementation of loop device system on osx, the hdiutil/hdix driver. But due to a number of reasons i need to roll out my own custom loop driver. Since hdix is closed-source can anyone give some starting pointers, links, advises, etc. on the subject? I had expirience implementing loop drivers on linux and windows but i don't really have a clue where to start from on osx. The basic functionality i need to implement is the same: given any file on disk, simulate a virtual block device interface for it. I also would like my loop driver to use all the native partition filter stacking available for real and hdix virtual block devices on osx.

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  • javascript problems when generating html reports from within java

    - by posdef
    Hi, I have been working on a Java project in which the reports will be generated in HTML, so I am implementing methods for creating these reports. One important functionality is to be able to have as much info as possible in the tables, but still not clutter too much. In other words the details should be available if the user wishes to take a look at them but not necessarily visible by default. I have done some searching and testing and found an interesting template for hiding/showing content with the use of CSS and javascript, the problem is that when I try the resultant html page the scripts dont work. I am not sure if it's due a problem in Java or in the javascript itself. I have compared the html code that java produces to the source where I found the template, they seem to match pretty well. Below are bits of my java code that generates the javascript and the content, i would greatly appreciate if anyone can point out the possible reasons for this problem: //goes to head private void addShowHideScript() throws IOException{ StringBuilder sb = new StringBuilder(); sb.append("<script type=\"text/javascript\" language=\"JavaScript\">\n"); sb.append("<!--function HideContent(d) {\n"); sb.append("document.getElementById(d).style.display=\"none\";}\n"); sb.append("function ShowContent(d) {\n"); sb.append("document.getElementById(d).style.display=\"block\";}\n"); sb.append("function ReverseDisplay(d) {\n"); sb.append("if(document.getElementById(d).style.display==\"none\")\n"); sb.append("{ document.getElementById(d).style.display=\"block\"; }\n"); sb.append("else { document.getElementById(d).style.display=\"none\"; }\n}\n"); sb.append("//--></script>\n"); out.write(sb.toString()); out.newLine(); } // body private String linkShowHideContent(String pathname, String divname){ StringBuilder sb = new StringBuilder(); sb.append("<a href=\"javascript:ReverseDisplay('"); sb.append(divname); sb.append("')\">"); sb.append(pathname); sb.append("</a>"); return sb.toString(); } // content out.write(linkShowHideContent("hidden content", "ex")); out.write("<div id=\"ex\" style=\"display:block;\">"); out.write("<p>Content goes here.</p></div>");

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  • Using only alphanumeric characters(a-z) inside toCharArray

    - by Aaron
    Below you will find me using toCharArray in order to send a string to array. I then MOVE the value of the letter using a for statement... for(i = 0; i < letter.length; i++){ letter[i] += (shiftCode); System.out.print(letter[i]); } However, when I use shiftCode to move the value such as... a shifted by -1; I get a symbol @. Is there a way to send the string to shiftCode or tell shiftCode to ONLY use letters? I need it to see my text, like "aaron", and when I use the for statement iterate through a-z only and ignore all symbols and numbers. I THINK it is as simple as... letter=codeWord.toCharArray(a,z); But trying different forms of that and googling it didn't give me any results. Perhaps it has to do with regex or something? Below you will find a complete copy of my program; it works exactly how I want it to do; but it iterates through letters and symbols. I also tried finding instructions online for toCharArray but if there exists any arguments I can't locate them. My program... import java.io.BufferedReader; import java.io.IOException; import java.io.InputStreamReader; /* * Aaron L. Jones * CS219 * AaronJonesProg3 * * This program is designed to - * Work as a Ceasar Cipher */ /** * * Aaron Jones */ public class AaronJonesProg3 { static String codeWord; static int shiftCode; static int i; static char[] letter; /** * @param args the command line arguments */ public static void main(String[] args) throws IOException { // Instantiating that Buffer Class // We are going to use this to read data from the user; in buffer // For performance related reasons BufferedReader reader; // Building the reader variable here // Just a basic input buffer (Holds things for us) reader = new BufferedReader(new InputStreamReader(System.in)); // Java speaks to us here / We get it to query our user System.out.print("Please enter text to encrypt: "); // Try to get their input here try { // Get their codeword using the reader codeWord = reader.readLine(); // Make that input upper case codeWord = codeWord.toUpperCase(); // Cut the white space out codeWord = codeWord.replaceAll("\\s",""); // Make it all a character array letter = codeWord.toCharArray(); } // If they messed up the input we let them know here and end the prog. catch(Throwable t) { System.out.println(t.toString()); System.out.println("You broke it. But you impressed me because" + "I don't know how you did it!"); } // Java Speaks / Lets get their desired shift value System.out.print("Please enter the shift value: "); // Try for their input try { // We get their number here shiftCode = Integer.parseInt(reader.readLine()); } // Again; if the user broke it. We let them know. catch(java.lang.NumberFormatException ioe) { System.out.println(ioe.toString()); System.out.println("How did you break this? Use a number next time!"); } for(i = 0; i < letter.length; i++){ letter[i] += (shiftCode); System.out.print(letter[i]); } System.out.println(); /**************************************************************** **************************************************************** ***************************************************************/ // Java speaks to us here / We get it to query our user System.out.print("Please enter text to decrypt: "); // Try to get their input here try { // Get their codeword using the reader codeWord = reader.readLine(); // Make that input upper case codeWord = codeWord.toUpperCase(); // Cut the white space out codeWord = codeWord.replaceAll("\\s",""); // Make it all a character array letter = codeWord.toCharArray(); } // If they messed up the input we let them know here and end the prog. catch(Throwable t) { System.out.println(t.toString()); System.out.println("You broke it. But you impressed me because" + "I don't know how you did it!"); } // Java Speaks / Lets get their desired shift value System.out.print("Please enter the shift value: "); // Try for their input try { // We get their number here shiftCode = Integer.parseInt(reader.readLine()); } // Again; if the user broke it. We let them know. catch(java.lang.NumberFormatException ioe) { System.out.println(ioe.toString()); System.out.println("How did you break this? Use a number next time!"); } for(i = 0; i < letter.length; i++){ letter[i] += (shiftCode); System.out.print(letter[i]); } System.out.println(); } }

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  • Finding C++ static initialization order problems

    - by Fred Larson
    We've run into some problems with the static initialization order fiasco, and I'm looking for ways to comb through a whole lot of code to find possible occurrences. Any suggestions on how to do this efficiently? Edit: I'm getting some good answers on how to SOLVE the static initialization order problem, but that's not really my question. I'd like to know how to FIND objects that are subject to this problem. Evan's answer seems to be the best so far in this regard; I don't think we can use valgrind, but we may have memory analysis tools that could perform a similar function. That would catch problems only where the initialization order is wrong for a given build, and the order can change with each build. Perhaps there's a static analysis tool that would catch this. Our platform is IBM XLC/C++ compiler running on AIX.

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  • VB.Net: How to fill in a form in a website, then click at a button and download the file using webbr

    - by BasisBit
    I am using a WebBrowser-Control to fill in a webform and then click at a button, this currently results in a standard Download File Dialog (you get these if you download a file using internet explorer), but instead, I have to catch this file and save it automatically with a by me defined name to a specific folder. I am trying to code a little application in vb.net which download the Export-file from my wordpress-blog, and I want to do this completely without user-interaction. Currently everything works, except the downloading of the file. I tried to catch it with the event System.Windows.Controls.WebBrowser.Navigating(ByVal Object, ByVal System.Windows.Navigation.NavigatingCancelEventArgs) but I don't see where to download the file from :( I hope you guys can help me.

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  • perl split on empty file

    - by Casey
    I have basically the following perl I'm working with: open I,$coupon_file or die "Error: File $coupon_file will not Open: $! \n"; while (<I>) { $lctr++; chomp; my @line = split/,/; if (!@line) { print E "Error: $coupon_file is empty!\n\n"; $processFile = 0; last; } } I'm having trouble determining what the split/,/ function is returning if an empty file is given to it. The code block if (!@line) is never being executed. If I change that to be if (@line) than the code block is executed. I've read information on the perl split function over at http://perldoc.perl.org/functions/split.html and the discussion here about testing for an empty array but not sure what is going on here. I am new to Perl so am probably missing something straightforward here. Thanks.

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  • Powershell 2.0 error handling - Command line call vs. ISE

    - by Gromix
    Hi, In the context of deployment scripts, I would like to capture any error than happens and stop immediately. I have notice some significant differences between the following calls: powershell.exe -File Script.ps1 powershell.exe -Command "& '.\Script.ps1'" powershell.exe .\Script.ps1 For example, the -File call will handle errors in the exact same way as the ISE. The other two seem to ignore the $ErrorActionPreference variable, and do not seem to catch Write-Error in try/catch blocks. Could someone help me understand the implications of each one, and why they are behaving differently? Thanks, Romain

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  • Microsoft Access and Java JDBC-ODBC Error

    - by user1638362
    Trying to insert some values in a Microsoft access database using java. I can an error however, java.sql.SQLException: [Microsoft][ODBC Driver Manager] The specified DSN contains an architecture mismatch between the Driver and Application Exception in thread "main" java.lang.NullPointerException To create the data source im using SysWoW64 odbcad32 and adding it the datasource to system DNS. I say this as i have seen else where there are problems which occur with 64bit systems. However it still doesn't work for me. Microsoft Office 32bit. import java.sql.Connection; import java.sql.DriverManager; import java.sql.SQLException; import java.sql.Statement; public class RMIAuctionHouseJDBC { /** * @param args */ public static void main(String[] args) { String theItem = "Car"; String theClient="KHAN"; String theMessage="1001"; Connection conn =null; // Create connection object try{ Class.forName("sun.jdbc.odbc.JdbcOdbcDriver"); System.out.println("Driver Found"); } catch(Exception e) { System.out.println("Driver Not Found"); System.err.println(e); } // connecting to database try{ String database ="jdbc:odbc:Driver={Microsoft Access Driver (*.accdb)};DBQ=AuctionHouseDatabase.accdb;"; conn = DriverManager.getConnection(database,"",""); System.out.println("Conn Found"); } catch(SQLException se) { System.out.println("Conn Not Found"); System.err.println(se); } // Create select statement and execute it try{ /*String insertSQL = "INSERT INTO AuctionHouse VALUES ( " +"'" +theItem+"', " +"'" +theClient+"', " +"'" +theMessage+"')"; */ Statement stmt = conn.createStatement(); String insertSQL = "Insert into AuctionHouse VALUES ('Item','Name','Price')"; stmt.executeUpdate(insertSQL); // Retrieve the results conn.close(); } catch(SQLException se) { System.out.println("SqlStatment Not Found"); System.err.println(se); } } } java.sql.SQLException: [Microsoft][ODBC Driver Manager] Data source name not found and no default driver specified at sun.jdbc.odbc.JdbcOdbc.createSQLException(Unknown Source) at sun.jdbc.odbc.JdbcOdbc.standardError(Unknown Source) at sun.jdbc.odbc.JdbcOdbc.SQLDriverConnect(Unknown Source) at sun.jdbc.odbc.JdbcOdbcConnection.initialize(Unknown Source)

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  • Tree item edit event listener in flex

    - by Biroka
    I want to catch itemEditEnd in a tree control, but i'm having a little trouble. I call the item editing a bit different: <mx:Tree id="tree" width="100%" height="100%" itemDoubleClick="treeProjects_itemDoubleClickHandler(event)" doubleClickEnabled="true" editable="true" itemEditBeginning="treeProjects_itemEditBeginingHandler(event)" itemEditEnd="treeProjects_itemEditEndHandler(event)" > but: protected function treeProjects_itemEditBeginingHandler(event:ListEvent):void { event.preventDefault(); } i do this, because I want to edit the field just when clicking rename in the context menu. And when I click rename in the context menu, this is what i'm doing (contextParentItem is the event catched on itemRollOver in the tree) : Tree( contextParentItem.target ).editedItemPosition = { columnIndex: 0, rowIndex: contextParentItem.rowIndex }; Thisway I can't catch the itemEditEnd event, but I want to handle some stuff, like: if the new entered value is an empty string, then I don't want to accept the new value if I hit ESC then, the old value should remain.

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  • What to Return? Error String, Bool with Error String Out, or Void with Exception

    - by Ranger Pretzel
    I spend most of my time in C# and am trying to figure out which is the best practice for handling an exception and cleanly return an error message from a called method back to the calling method. For example, here is some ActiveDirectory authentication code. Please imagine this Method as part of a Class (and not just a standalone function.) bool IsUserAuthenticated(string domain, string user, string pass, out errStr) { bool authentic = false; try { // Instantiate Directory Entry object DirectoryEntry entry = new DirectoryEntry("LDAP://" + domain, user, pass); // Force connection over network to authenticate object nativeObject = entry.NativeObject; // No exception thrown? We must be good, then. authentic = true; } catch (Exception e) { errStr = e.Message().ToString(); } return authentic; } The advantages of doing it this way are a clear YES or NO that you can embed right in your If-Then-Else statement. The downside is that it also requires the person using the method to supply a string to get the Error back (if any.) I guess I could overload this method with the same parameters minus the "out errStr", but ignoring the error seems like a bad idea since there can be many reasons for such a failure... Alternatively, I could write a method that returns an Error String (instead of using "out errStr") in which a returned empty string means that the user authenticated fine. string AuthenticateUser(string domain, string user, string pass) { string errStr = ""; try { // Instantiate Directory Entry object DirectoryEntry entry = new DirectoryEntry("LDAP://" + domain, user, pass); // Force connection over network to authenticate object nativeObject = entry.NativeObject; } catch (Exception e) { errStr = e.Message().ToString(); } return errStr; } But this seems like a "weak" way of doing things. Or should I just make my method "void" and just not handle the exception so that it gets passed back to the calling function? void AuthenticateUser(string domain, string user, string pass) { // Instantiate Directory Entry object DirectoryEntry entry = new DirectoryEntry("LDAP://" + domain, user, pass); // Force connection over network to authenticate object nativeObject = entry.NativeObject; } This seems the most sane to me (for some reason). Yet at the same time, the only real advantage of wrapping those 2 lines over just typing those 2 lines everywhere I need to authenticate is that I don't need to include the "LDAP://" string. The downside with this way of doing it is that the user has to put this method in a try-catch block. Thoughts? Is there another way of doing this that I'm not thinking of?

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  • What does Ruby have that Python doesn't, and vice versa?

    - by Lennart Regebro
    There is a lot of discussions of Python vs Ruby, and I all find them completely unhelpful, because they all turn around why feature X sucks in language Y, or that claim language Y doesn't have X, although in fact it does. I also know exactly why I prefer Python, but that's also subjective, and wouldn't help anybody choosing, as they might not have the same tastes in development as I do. It would therefore be interesting to list the differences, objectively. So no "Python's lambdas sucks". Instead explain what Ruby's lambdas can do that Python's can't. No subjectivity. Example code is good! Don't have several differences in one answer, please. And vote up the ones you know are correct, and down those you know are incorrect (or are subjective). Also, differences in syntax is not interesting. We know Python does with indentation what Ruby does with brackets and ends, and that @ is called self in Python. UPDATE: This is now a community wiki, so we can add the big differences here. Ruby has a class reference in the class body In Ruby you have a reference to the class (self) already in the class body. In Python you don't have a reference to the class until after the class construction is finished. An example: class Kaka puts self end self in this case is the class, and this code would print out "Kaka". There is no way to print out the class name or in other ways access the class from the class definition body in Python. All classes are mutable in Ruby This lets you develop extensions to core classes. Here's an example of a rails extension: class String def starts_with?(other) head = self[0, other.length] head == other end end Ruby has Perl-like scripting features Ruby has first class regexps, $-variables, the awk/perl line by line input loop and other features that make it more suited to writing small shell scripts that munge text files or act as glue code for other programs. Ruby has first class continuations Thanks to the callcc statement. In Python you can create continuations by various techniques, but there is no support built in to the language. Ruby has blocks With the "do" statement you can create a multi-line anonymous function in Ruby, which will be passed in as an argument into the method in front of do, and called from there. In Python you would instead do this either by passing a method or with generators. Ruby: amethod { |here| many=lines+of+code goes(here) } Python: def function(here): many=lines+of+code goes(here) amethod(function) Interestingly, the convenience statement in Ruby for calling a block is called "yield", which in Python will create a generator. Ruby: def themethod yield 5 end themethod do |foo| puts foo end Python: def themethod(): yield 5 for foo in themethod: print foo Although the principles are different, the result is strikingly similar. Python has built-in generators (which are used like Ruby blocks, as noted above) Python has support for generators in the language. In Ruby you could use the generator module that uses continuations to create a generator from a block. Or, you could just use a block/proc/lambda! Moreover, in Ruby 1.9 Fibers are, and can be used as, generators. docs.python.org has this generator example: def reverse(data): for index in range(len(data)-1, -1, -1): yield data[index] Contrast this with the above block examples. Python has flexible name space handling In Ruby, when you import a file with require, all the things defined in that file will end up in your global namespace. This causes namespace pollution. The solution to that is Rubys modules. But if you create a namespace with a module, then you have to use that namespace to access the contained classes. In Python, the file is a module, and you can import its contained names with from themodule import *, thereby polluting the namespace if you want. But you can also import just selected names with from themodule import aname, another or you can simply import themodule and then access the names with themodule.aname. If you want more levels in your namespace you can have packages, which are directories with modules and an __init__.py file. Python has docstrings Docstrings are strings that are attached to modules, functions and methods and can be introspected at runtime. This helps for creating such things as the help command and automatic documentation. def frobnicate(bar): """frobnicate takes a bar and frobnicates it >>> bar = Bar() >>> bar.is_frobnicated() False >>> frobnicate(bar) >>> bar.is_frobnicated() True """ Python has more libraries Python has a vast amount of available modules and bindings for libraries. Python has multiple inheritance Ruby does not ("on purpose" -- see Ruby's website, see here how it's done in Ruby). It does reuse the module concept as a sort of abstract classes. Python has list/dict comprehensions Python: res = [x*x for x in range(1, 10)] Ruby: res = (0..9).map { |x| x * x } Python: >>> (x*x for x in range(10)) <generator object <genexpr> at 0xb7c1ccd4> >>> list(_) [0, 1, 4, 9, 16, 25, 36, 49, 64, 81] Ruby: p = proc { |x| x * x } (0..9).map(&p) Python: >>> {x:str(y*y) for x,y in {1:2, 3:4}.items()} {1: '4', 3: '16'} Ruby: >> Hash[{1=>2, 3=>4}.map{|x,y| [x,(y*y).to_s]}] => {1=>"4", 3=>"16"} Python has decorators Things similar to decorators can be created in Ruby, and it can also be argued that they aren't as necessary as in Python.

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  • Restoring multiple database backups in a transaction

    - by Raghu Dodda
    I wrote a stored procedure that restores as set of the database backups. It takes two parameters - a source directory and a restore directory. The procedure looks for all .bak files in the source directory (recursively) and restores all the databases. The stored procedure works as expected, but it has one issue - if I uncomment the try-catch statements, the procedure terminates with the following error: error_number = 3013 error_severity = 16 error_state = 1 error_message = DATABASE is terminating abnormally. The weird part is sometimes (it is not consistent) the restore is done even if the error occurs. The procedure: create proc usp_restore_databases ( @source_directory varchar(1000), @restore_directory varchar(1000) ) as begin declare @number_of_backup_files int -- begin transaction -- begin try -- step 0: Initial validation if(right(@source_directory, 1) <> '\') set @source_directory = @source_directory + '\' if(right(@restore_directory, 1) <> '\') set @restore_directory = @restore_directory + '\' -- step 1: Put all the backup files in the specified directory in a table -- declare @backup_files table ( file_path varchar(1000)) declare @dos_command varchar(1000) set @dos_command = 'dir ' + '"' + @source_directory + '*.bak" /s/b' /* DEBUG */ print @dos_command insert into @backup_files(file_path) exec xp_cmdshell @dos_command delete from @backup_files where file_path IS NULL select @number_of_backup_files = count(1) from @backup_files /* DEBUG */ select * from @backup_files /* DEBUG */ print @number_of_backup_files -- step 2: restore each backup file -- declare backup_file_cursor cursor for select file_path from @backup_files open backup_file_cursor declare @index int; set @index = 0 while(@index < @number_of_backup_files) begin declare @backup_file_path varchar(1000) fetch next from backup_file_cursor into @backup_file_path /* DEBUG */ print @backup_file_path -- step 2a: parse the full backup file name to get the DB file name. declare @db_name varchar(100) set @db_name = right(@backup_file_path, charindex('\', reverse(@backup_file_path)) -1) -- still has the .bak extension /* DEBUG */ print @db_name set @db_name = left(@db_name, charindex('.', @db_name) -1) /* DEBUG */ print @db_name set @db_name = lower(@db_name) /* DEBUG */ print @db_name -- step 2b: find out the logical names of the mdf and ldf files declare @mdf_logical_name varchar(100), @ldf_logical_name varchar(100) declare @backup_file_contents table ( LogicalName nvarchar(128), PhysicalName nvarchar(260), [Type] char(1), FileGroupName nvarchar(128), [Size] numeric(20,0), [MaxSize] numeric(20,0), FileID bigint, CreateLSN numeric(25,0), DropLSN numeric(25,0) NULL, UniqueID uniqueidentifier, ReadOnlyLSN numeric(25,0) NULL, ReadWriteLSN numeric(25,0) NULL, BackupSizeInBytes bigint, SourceBlockSize int, FileGroupID int, LogGroupGUID uniqueidentifier NULL, DifferentialBaseLSN numeric(25,0) NULL, DifferentialBaseGUID uniqueidentifier, IsReadOnly bit, IsPresent bit ) insert into @backup_file_contents exec ('restore filelistonly from disk=' + '''' + @backup_file_path + '''') select @mdf_logical_name = LogicalName from @backup_file_contents where [Type] = 'D' select @ldf_logical_name = LogicalName from @backup_file_contents where [Type] = 'L' /* DEBUG */ print @mdf_logical_name + ', ' + @ldf_logical_name -- step 2c: restore declare @mdf_file_name varchar(1000), @ldf_file_name varchar(1000) set @mdf_file_name = @restore_directory + @db_name + '.mdf' set @ldf_file_name = @restore_directory + @db_name + '.ldf' /* DEBUG */ print 'mdf_logical_name = ' + @mdf_logical_name + '|' + 'ldf_logical_name = ' + @ldf_logical_name + '|' + 'db_name = ' + @db_name + '|' + 'backup_file_path = ' + @backup_file_path + '|' + 'restore_directory = ' + @restore_directory + '|' + 'mdf_file_name = ' + @mdf_file_name + '|' + 'ldf_file_name = ' + @ldf_file_name restore database @db_name from disk = @backup_file_path with move @mdf_logical_name to @mdf_file_name, move @ldf_logical_name to @ldf_file_name -- step 2d: iterate set @index = @index + 1 end close backup_file_cursor deallocate backup_file_cursor -- end try -- begin catch -- print error_message() -- rollback transaction -- return -- end catch -- -- commit transaction end Does anybody have any ideas why this might be happening? Another question: is the transaction code useful ? i.e., if there are 2 databases to be restored, will SQL Server undo the restore of one database if the second restore fails?

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  • How do I make my multicast program work between computers on different networks?

    - by George
    I made a little chat applet using multicast. It works fine between computers on the same network, but fails if the computers are on different networks. Why is this? import java.io.*; import java.net.*; import java.awt.*; import java.awt.event.*; import javax.swing.*; public class ClientA extends JApplet implements ActionListener, Runnable { JTextField tf; JTextArea ta; MulticastSocket socket; InetAddress group; String name=""; public void start() { try { socket = new MulticastSocket(7777); group = InetAddress.getByName("233.0.0.1"); socket.joinGroup(group); socket.setTimeToLive(255); Thread th = new Thread(this); th.start(); name =JOptionPane.showInputDialog(null,"Please enter your name.","What is your name?",JOptionPane.PLAIN_MESSAGE); tf.grabFocus(); }catch(Exception e) {e.printStackTrace();} } public void init() { JPanel p = new JPanel(new BorderLayout()); ta = new JTextArea(); ta.setEditable(false); ta.setLineWrap(true); JScrollPane sp = new JScrollPane(ta); p.add(sp,BorderLayout.CENTER); JPanel p2 = new JPanel(); tf = new JTextField(30); tf.addActionListener(this); p2.add(tf); JButton b = new JButton("Send"); b.addActionListener(this); p2.add(b); p.add(p2,BorderLayout.SOUTH); add(p); } public void actionPerformed(ActionEvent ae) { String message = name+":"+tf.getText(); tf.setText(""); tf.grabFocus(); byte[] buf = message.getBytes(); DatagramPacket packet = new DatagramPacket(buf,buf.length, group,7777); try { socket.send(packet); } catch(Exception e) {} } public void run() { while(true) { byte[] buf = new byte[256]; String received = ""; DatagramPacket packet = new DatagramPacket(buf, buf.length); try { socket.receive(packet); received = new String(packet.getData()).trim(); } catch(Exception e) {} ta.append(received +"\n"); ta.setCaretPosition(ta.getDocument().getLength()); } } }

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  • Paint java GUI component to image file

    - by Simon
    Let's say I have JButton test = new JButton("Test Button"); and I want to draw the button into an image object and save it to a file. I tried this: BufferedImage b = new BufferedImage(500, 500, BufferedImage.TYPE_INT_ARGB); test.paint(b.createGraphics()); File output = new File("C:\\screenie.png"); try { ImageIO.write(b, "png", output); } catch (IOException e) { // TODO Auto-generated catch block e.printStackTrace(); } This code produced an empty 500x500 PNG-file. Does anyone know how I can draw the GUI component to an image file?

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  • Classes missing if application runs for a long time

    - by Rogach
    I have a funny problem - if my application runs for a long time ( 20h), then sometimes I get NoClassDefFound error - seems like JVM decided that the class is not going to be used anyway and GCd it. To be a bit more specific, here's an example case: object ErrorHandler extends PartialFunction[Throwable,Unit] { def isDefinedAt(t: Throwable) = true def apply(e: Throwable) =e match { // ... handle errors } } // somewhere else in the code... try { // ... long running code, can take more than 20 hours to complete } catch (ErrorHandler) And I get the following exception: Exception in thread "main" java.lang.NoClassDefFoundError: org/rogach/avalanche/ErrorHandler$ If that try/catch block runs for smaller amounts of time, everything works as expected. If anyone is interested, here is the codebase in question: Avalanche I need to note that I saw this and similar problems only on Cent OS 5 machines, using JRE 6u26 and Scala 2.9.1 / 2.9.2. What could be the cause of this problem?

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  • Hibernate save() and transaction rollback

    - by Marco
    Hi, In Hibernate when i save() an object in a transaction, and then i rollback it, the saved object still remains in the DB. It's strange because this issue doesn't happen with the update() or delete() method, just with save(). Here is the code i'm using: DbEntity dbEntity = getDbEntity(); HibernateUtil.beginTransaction(); Session session = HibernateUtil.getCurrentSession(); session.save(dbEntity); HibernateUtil.rollbackTransaction(); And here is the HibernateUtil class (just the involved functions, i guarantee the getSessionFactory() method works well - there is an Interceptor handler, but it doesn't matter now): private static final ThreadLocal<Session> threadSession = new ThreadLocal<Session>(); private static final ThreadLocal<Transaction> threadTransaction = new ThreadLocal<Transaction>(); /** * Retrieves the current Session local to the thread. * <p/> * If no Session is open, opens a new Session for the running thread. * * @return Session */ public static Session getCurrentSession() throws HibernateException { Session s = (Session) threadSession.get(); try { if (s == null) { log.debug("Opening new Session for this thread."); if (getInterceptor() != null) { log.debug("Using interceptor: " + getInterceptor().getClass()); s = getSessionFactory().openSession(getInterceptor()); } else { s = getSessionFactory().openSession(); } threadSession.set(s); } } catch (HibernateException ex) { throw new HibernateException(ex); } return s; } /** * Start a new database transaction. */ public static void beginTransaction() throws HibernateException { Transaction tx = (Transaction) threadTransaction.get(); try { if (tx == null) { log.debug("Starting new database transaction in this thread."); tx = getCurrentSession().beginTransaction(); threadTransaction.set(tx); } } catch (HibernateException ex) { throw new HibernateException(ex); } } /** * Rollback the database transaction. */ public static void rollbackTransaction() throws HibernateException { Transaction tx = (Transaction) threadTransaction.get(); try { threadTransaction.set(null); if ( tx != null && !tx.wasCommitted() && !tx.wasRolledBack() ) { log.debug("Tyring to rollback database transaction of this thread."); tx.rollback(); } } catch (HibernateException ex) { throw new HibernateException(ex); } finally { closeSession(); } } Thanks

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  • How can i take only integer input from keyboard and if input is invalid how do i ask user agaian

    - by fari
    This is what i have written so far but when exception is raised it does not again ask teh user for input. do{ System.out.println("Enter the number of stones to play with: "); BufferedReader br = new BufferedReader(new InputStreamReader(System.in)); String temp=br.readLine(); }while (key<0 && key>9); if(key<0 || key>10) throw new InvalidStartingStonesException(key); player1=new KeyBoardPlayer(); player2 = new KeyBoardPlayer(); this.player1=player1; this.player2=player2; state=new KalaGameState(key); } catch(NumberFormatException nFE) { System.out.println("Not an Integer");} catch(IOException e) { System.out.println(e); }

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