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  • Selectively parsing log files using Java

    - by GPX
    I have to parse a big bunch of log files, which are in the following format. SOME SQL STATEMENT/QUERY DB20000I The SQL command completed successfully. SOME OTHER SQL STATEMENT/QUERY DB21034E The command was processed as an SQL statement because it was not a valid Command Line Processor command. EDIT 1: The first 3 lines (including a blank line) indicate an SQL statement executed successfully, while the next three show the statement and the exception it caused. darioo's reply below, suggesting the use of grep instead of Java, works beautifully for a single line SQL statement. EDIT 2: However, the SQL statement/query might not be a single line, necessarily. Sometimes it is a big CREATE PROCEDURE...END PROCEDURE block. Can this problem be overcome using only Unix commands too? Now I need to parse through the entire log file and pick all occurrences of the pair of (SQL statement + error) and write them in a separate file. Please show me how to do this!

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  • shell command to find a process id and attach to it?

    - by lallous
    Hello I want to attach to a running process using 'ddd', what I manually do is: # ps -ax | grep PROCESS_NAME Then I get a list and the pid, then I type: # ddd PROCESS_NAME THE_PID Is there is a way to type just one command directly? Remark: When I type ps -ax | grep PROCESS_NAME <- grep will match both the process and grep command line itself.

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  • How can I get `find` to ignore .svn directories?

    - by John Kugelman
    I often use the find command to search through source code, delete files, whatever. Annoyingly, because Subversion stores duplicates of each file in its .svn/text-base/ directories my simple searches end up getting lots of duplicate results. For example, I want to recursively search for uint in multiple messages.h and messages.cpp files: # find -name 'messages.*' -exec grep -Iw uint {} + ./messages.cpp: Log::verbose << "Discarding out of date message: id " << uint(olderMessage.id) ./messages.cpp: Log::verbose << "Added to send queue: " << *message << ": id " << uint(preparedMessage->id) ./messages.cpp: Log::error << "Received message with invalid SHA-1 hash: id " << uint(incomingMessage.id) ./messages.cpp: Log::verbose << "Received " << *message << ": id " << uint(incomingMessage.id) ./messages.cpp: Log::verbose << "Sent message: id " << uint(preparedMessage->id) ./messages.cpp: Log::verbose << "Discarding unsent message: id " << uint(preparedMessage->id) ./messages.cpp: for (uint i = 0; i < 10 && !_stopThreads; ++i) { ./.svn/text-base/messages.cpp.svn-base: Log::verbose << "Discarding out of date message: id " << uint(olderMessage.id) ./.svn/text-base/messages.cpp.svn-base: Log::verbose << "Added to send queue: " << *message << ": id " << uint(preparedMessage->id) ./.svn/text-base/messages.cpp.svn-base: Log::error << "Received message with invalid SHA-1 hash: id " << uint(incomingMessage.id) ./.svn/text-base/messages.cpp.svn-base: Log::verbose << "Received " << *message << ": id " << uint(incomingMessage.id) ./.svn/text-base/messages.cpp.svn-base: Log::verbose << "Sent message: id " << uint(preparedMessage->id) ./.svn/text-base/messages.cpp.svn-base: Log::verbose << "Discarding unsent message: id " << uint(preparedMessage->id) ./.svn/text-base/messages.cpp.svn-base: for (uint i = 0; i < 10 && !_stopThreads; ++i) { ./virus/messages.cpp:void VsMessageProcessor::_progress(const string &fileName, uint scanCount) ./virus/messages.cpp:ProgressMessage::ProgressMessage(const string &fileName, uint scanCount) ./virus/messages.h: void _progress(const std::string &fileName, uint scanCount); ./virus/messages.h: ProgressMessage(const std::string &fileName, uint scanCount); ./virus/messages.h: uint _scanCount; ./virus/.svn/text-base/messages.cpp.svn-base:void VsMessageProcessor::_progress(const string &fileName, uint scanCount) ./virus/.svn/text-base/messages.cpp.svn-base:ProgressMessage::ProgressMessage(const string &fileName, uint scanCount) ./virus/.svn/text-base/messages.h.svn-base: void _progress(const std::string &fileName, uint scanCount); ./virus/.svn/text-base/messages.h.svn-base: ProgressMessage(const std::string &fileName, uint scanCount); ./virus/.svn/text-base/messages.h.svn-base: uint _scanCount; How can I tell find to ignore the .svn directories?

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  • Merge two text files at a specific location, sed or awk.

    - by S1syphus
    I have two text files, I want to place a text in the middle of another, I did some research and found information about adding single strings: I have a comment in the second text file called STUFFGOESHERE, so I tried: sed '/^STUFFGOESHERE/a file1.txt' file2.txt sed: 1: "/^STUFFGOESHERE/a long.txt": command a expects \ followed by text So I tried something different, trying to place the contents of the text based on a given line, but no luck. Any ideas?

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  • Is there a way to find a specific file and then change into the directory containing it in one go?

    - by bergyman
    I'm looking for a way to find what I know will be a unique file, and then change into the directory containing that file. Something along the lines of: find . -name 'Subscription.java' | xargs cd Or: find . -name 'Subscription.java' -exec cd {} \; I know this won't work because it's both trying to cd supplying the entire absolute path, which contains the file, and also because xargs can't do any built in shell commands...but you get the point of what I want to accomplish.

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  • xargs command works on ubuntu, but not mac

    - by Corey Hart
    I have the following line of code that I use to update my personal date variable in my projects to todays current date. This line works in Ubuntu's terminal, but the Mac terminal seems to be far behind. Unfortunately, I copied this snippet from some site, so I'm not sure how it exactly works. Suggestions? grep -ilr --exclude=revar.sh --exclude=README.md "[DATE]" * | grep -v .git | xargs -i@ sed -i "s/\[DATE\]/${today}/g" @

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  • join 3 files by first Column with awk ?

    - by noinflection
    i have three similar files, they are all like this: File A ID1 Value1a ID2 Value2a . . . IDN Value2n and i want an output like this Output ID1 Value1a Value1b Value1c ID2 Value2a Value2b Value2c ..... IDN ValueNa ValueNb ValueNc Looking to the first line, i want value1A to be the value of id1 in fileA, value1B the value of id1 in fileB, and so on which each field and each line. I thougth it like a sql join. I've tried several things but none of them where even close.

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  • Using placeholders/variables in a sed command

    - by jesse_galley
    I want to store a specific part of a matched result as a variable to be used for replacement later. I would like to keep this in a one liner instead of finding the variable I need before hand. when configuring apache, and use mod_rewrite, you can specificy specific parts of patterns to be used as variables,like this: RewriteRule ^www.example.com/page/(.*)$ http://www.example.com/page.php?page=$1 [R=301,L] the part of the pattern match that's contained inside the parenthesis is stored as $1 for use later. So if the url was www.example.com/page/home, it would be replaced with www.example.com/page.php?page=home. So the "home" part of the match was saved in $1 because it was the part of the pattern inside the parenthesis. I want something like this functionality with a sed command, I need to automatically replace many strings in a SQL dump file, to add drop table if exist commands before each create table, but I need to know the table name to do this, so if the dump file contains something like: ... CREATE TABLE `orders` ... I need to run something like: cat dump.sql | sed "s/CREATE TABLE `(.*)`/DROP TABLE IF EXISTS $1\N CREATE TABLE `$1`/g" to get the result of: ... DROP TABLE IF EXISTS `orders` CREATE TABLE `orders` ... I'm using the mod_rewrite syntax in the sed command as a logical example of what I'm trying to do. Any suggestions?

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  • Tee a Pipe Asynchronously

    - by User1
    I would like to write the same information to two pipes, but I don't want to wait for the first pipe to read. Here's an example mkfifo one mkfifo two echo hi | tee one two & cat one & cat two & cat one does not start reading until cat two is run. Is there a way to make cat one run without waiting?

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  • Fastest way to sort files

    - by Werner
    Hi, I have a huge text file with lines like: -568.563626 159 33 -1109.660591 -1231.295129 4.381508 -541.181308 159 28 -1019.279615 -1059.115975 4.632301 -535.370812 155 29 -1033.071786 -1152.907805 4.420473 -533.547101 157 28 -1046.218277 -1063.389677 4.423696 What I want is to sort the file, depending on the 5th column, so I would get -568.563626 159 33 -1109.660591 -1231.295129 4.381508 -535.370812 155 29 -1033.071786 -1152.907805 4.420473 -533.547101 157 28 -1046.218277 -1063.389677 4.423696 -541.181308 159 28 -1019.279615 -1059.115975 4.632301 For this I use: for i in file.txt ; do sort -k5n $i ; done I wonder if this is the fastest or more efficient way Thanks

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  • Sed-replacing a pattern

    - by grails_enthu
    I have below code: <td nowrap="nowrap" width="74"> <p align="center">server1</p> </td> <td nowrap="nowrap" width="74"> <p align="center">server2</p> </td> and so on.I want to get output as: <td nowrap="nowrap" width="74">server1</td> <td nowrap="nowrap" width="74">server2</td> What should be my approach?Say for example the file is server.html I have done something like this: sed "s/<p align="center">*</p>/*/" -i server.html But its not working.

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  • sed find pattern on line with another pattern

    - by user2962390
    I am trying to extract text from a file between a '<' and a '', but only on a line starting with another specific pattern. So in a file that looks like: XXX Something here XXX Something more here XXX <\Lines like this are a problem ZZZ something <\This is the text I need XXX Don't need any of this I would like to print only the "<\This is the text I need". If I do sed -n '/^ZZZ/p' FILENAME it pulls the correct lines I need to look at, but obviously prints the whole line. sed -n '/</,//p' FILENAME prints way too much. I have looked into grouping and tried sed -n '/^ZZZ/{/</,//} FILENAME but this doesn't seem to work at all. Any suggestions? They will be much appreciated. (Apologies for formatting, never posted on here before)

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  • how can I split up this string

    - by lacrosse1991
    I am currently trying to sanitize some log files so they are in an easier format to read, and have been trying to use the gnu cut command, which works fairly well, although I cannot really think of a good way to remove the [INFO] part of the string logs/logs/server_1283258036.log:2010-08-31 23:06:51 [INFO] <NateMar> where?! logs/logs/server_1281904775.log:2010-08-15 22:59:53 [INFO] <BoonTheMoon> §b<BoonTheMoon>§ohhhhhh I would ultimately want to get the strings down to something that resembles the following 2010-08-31 23:06:51 <NateMar> where?! 2010-08-15 22:59:53 <BoonTheMoon> ohhhhhh how should I go about doing this? Have thought about using awk, although Im having a difficult time getting a grip on how that would work, so not sure how to set up something to do that, any help would be greatly appreciated, thanks!

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  • remsh rsh error redirect problem

    - by soField
    using following command on hp-ux remsh opera -l myuser crontab -l /opt1/exp_opera_crontab 2/opt/a.log and when i echo $? i get 0 because its executing crontab -l on remote machine but i dont have opt1 directory so export wont be copied to my local machine in /opt1/exp_opera_crontab i dont get any error about this when i run this remsh or rsh command is there any way to identify both of remote and local machine related errors and redirecting them into my local machine ?

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  • Using /dev/tcp instead of wget

    - by User1
    Why does this work: exec 3</dev/tcp/www.google.com/80 echo -e "GET / HTTP/1.1\n\n"&3 cat <&3 And this fail: echo -e "GET / HTTP/1.1\n\n" /dev/tcp/www.google.com/80 cat </dev/tcp/www.google.com/80 Is there a way to do it in one-line w/o using wget, curl, or some other library?

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  • Folder Renaming After Tar Extraction

    - by Chris S
    I have an tarball, myarchive.tar.gz. When I uncompress it using "tar -zxvf myarchive.tar.gz", it creates a folder myarchive-x980-2303-ssioo. What's the easiest way to automatically rename the extracted folder to ensure it matches the name of the archive? I've checked tar's manpage, but it doesn't seem to have an option for this.

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  • Uniq in awk; removing duplicate values in a column using awk

    - by D W
    I have a large datafile in the following format below: ENST00000371026 WDR78,WDR78,WDR78, WD repeat domain 78 isoform 1,WD repeat domain 78 isoform 1,WD repeat domain 78 isoform 2, ENST00000371023 WDR32 WD repeat domain 32 isoform 2 ENST00000400908 RERE,KIAA0458, atrophin-1 like protein isoform a,Homo sapiens mRNA for KIAA0458 protein, partial cds., The columns are tab separated. Multiple values within columns are comma separated. I would like to remove the duplicate values in the second column to result in something like this: ENST00000371026 WDR78 WD repeat domain 78 isoform 1,WD repeat domain 78 isoform 1,WD repeat domain 78 isoform 2, ENST00000371023 WDR32 WD repeat domain 32 isoform 2 ENST00000400908 RERE,KIAA0458 atrophin-1 like protein isoform a,Homo sapiens mRNA for KIAA0458 protein, partial cds., I tried the following code below but it doesn't seem to remove the duplicate values. awk ' BEGIN { FS="\t" } ; { split($2, valueArray,","); j=0; for (i in valueArray) { if (!( valueArray[i] in duplicateArray)) { duplicateArray[j] = valueArray[i]; j++; } }; printf $1 "\t"; for (j in duplicateArray) { if (duplicateArray[j]) { printf duplicateArray[j] ","; } } printf "\t"; print $3 }' knownGeneFromUCSC.txt How can I remove the duplicates in column 2 correctly?

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  • move file from one location to another in putty

    - by dexter
    i have created folder on my server (ie finesse)- 'home' in which i have several perl(.pl) files as tt.pl, re.pl etc. now i have created new folder in 'home' folder called 'perl' and want to move tt.pl and re.pl in perl folder is there any command to do so (like cut-paste in windows)? note: i am using putty 0.60 on windows xp

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  • Text substitution (reading from file and saving to the same file) on linux with sed...

    - by Roger
    I want to read the file "teste", make some "find&replace" and overwrite "teste" with the results. The closer i got till now is: $cat teste I have to find something This is hard to find... Find it wright now! $sed -n 's/find/replace/w teste1' teste $cat teste1 I have to replace something This is hard to replace... If I try to save to the same file like this: $sed -n 's/find/replace/w teste' teste or: $sed -n 's/find/replace/' teste > teste The result will be a blank file... I know I am missing something very stupid but any help will be welcome. UPDATE: Based on the tips given by the folks and this link: http://idolinux.blogspot.com/2008/08/sed-in-place-edit.html here's my updated code: sed -i -e 's/find/replace/g' teste

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  • List and Remove directories in an archive

    - by Tim
    I wonder how to list the content and remove some directories in an archive file? For example, I have an archive file data.tar. I would like to list its content without extracting it. I also would like to remove some directories inside it matching "*/count1000" Thanks and regards!

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