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  • What do you think is the best language for Bioinformatics?

    - by Ben Fossen
    I have done a couple research jobs in Bio-informatics and I have used Matlab for them. Matlab had a lot of powerful tools and was easy to use. I did thinks with genome sequencing and predicting metabolic pathways. I am wondering what other people think is best? or there might not be one specific language but a few that lend themselves best to Bio-informatics work that is math heavy and deals with a large amount of data.

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  • Create blog post simply and easily

    - by danit
    I have a script which collects an image, link and some text content from various sources. It loops through and creates a number of posts. I'd like take each post add it to Wordpress with a Title, an image, and a link. Can anyone suggest an easy way of doing this?

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  • Beginner to PHP web services

    - by Manjula
    What is the best way to implement web services in PHP? I have heard about libraries like NuSOAP and WSO2 web service platform, But don't know what is the best ( or a good and easy to learn) for using web service in PHP?

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  • Get all but first from an array

    - by Stacey
    Is there a one-line easy linq expression to just get everything from a simple array except the first element? for (int i = 1; i <= contents.Length - 1; i++) Message += contents[i]; I just wanted to see if it was easier to condense.

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  • WPF datagrid template

    - by MadSeb
    Hi, I want to make a WPF datagrid look similar to the HTML grid in the following picture: http://img443.imageshack.us/img443/2563/saltoftheearth.jpg Does anyone know an easy way to do this ? Regards, S.

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  • Android: DOM-Model to XML

    - by poeschlorn
    Hey Guys, analogue to this one (http://stackoverflow.com/questions/2788345/replacing-xml-in-file-from-document-in-java or http://www.exampledepot.com/egs/javax.xml.transform/WriteDom.html) I try to use it under Android... The problem is, that I can't use the suggested solution under android, because it throws java.lang.verifyError... After reading a little bit, I found out, that the class that was used to store the data to file, is not usable in android... can you suggest another solution, which is similar easy to use?

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  • ORDER BY letters and not numbers of a field

    - by Jon
    Is there a way to order mysql results by the first letter and ignore numbers? For example, I have a list of addresses: 123 Main Street 456 Second Street 234 Third Street and I want to order by the street name and ignore the street number. Is there an easy way to do this?

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  • Matching day in datetime field from sqlite

    - by 99miles
    In Ruby on Rails I'm doing something like: Appointment.find( :first, :conditions => "staff_id = #{staff_id} AND datetimefield = #{datetime}") ... where datetimefield is of course, a datetime field. But, I only want rows where the date is equal to a given day, say 2/12/2011. I don't care about the time. What's an easy way to do this? Thanks!

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  • Can this Query can be corrected or different table structure needed? (question is clear, detailed, d

    - by sandeepan
    This is a bit lengthy but I have provided sufficient details and kept things very clear. Please see if you can help. (I will surely accept answer if it solves my problem) I am sure a person experienced with this can surely help or suggest me to decide the tables structure. About the system:- There are tutors who create classes A tags based search approach is being followed Tag relations are created/edited when new tutors registers/edits profile data and when tutors create classes (this makes tutors and classes searcheable).For simplicity, let us consider only tutor name and class name are the fields which are matched against search keywords. In this example, I am considering - tutor "Sandeepan Nath" has created a class called "first class" tutor "Bob Cratchit" has created a class called "new class" Desired search results- AND logic to be appied on the search keywords and match against class and tutor data(class name + tutor name), in other words, All those classes be shown such that all the search terms are present in the class name or its tutor name. Example to be clear - Searching "first class" returns class with id_wc = 1. Working Searching "Sandeepan class" should also return class with id_wc = 1. Not working in System 2. Problem with profile editing and searching To tell in one sentence, I am facing a conflict between the ease of profile edition (edition of tag relations when tutor profiles are edited) and the ease of search logic. In the beginning, we had one table structure and search was easy but tag edition logic was very clumsy and unmaintainable(Check System 1 in the section below) . So we created separate tag relations tables to make profile edition simpler but search has become difficult. Please dump the tables so that you can run the search query I have given below and see the results. System 1 (previous system - search easy - profile edition difficult):- Only one table called All_Tag_Relations table had the all the tag relations. The tags table below is common to both systems 1 and 2. CREATE TABLE IF NOT EXISTS `all_tag_relations` ( `id_tag_rel` int(10) NOT NULL AUTO_INCREMENT, `id_tag` int(10) unsigned NOT NULL DEFAULT '0', `id_tutor` int(10) DEFAULT NULL, `id_wc` int(10) unsigned DEFAULT NULL, PRIMARY KEY (`id_tag_rel`), KEY `All_Tag_Relations_FKIndex1` (`id_tag`), KEY `id_wc` (`id_wc`), KEY `id_tag` (`id_tag`) ) ENGINE=InnoDB DEFAULT CHARSET=latin1; INSERT INTO `all_tag_relations` (`id_tag_rel`, `id_tag`, `id_tutor`, `id_wc`) VALUES (1, 1, 1, NULL), (2, 2, 1, NULL), (3, 1, 1, 1), (4, 2, 1, 1), (5, 3, 1, 1), (6, 4, 1, 1), (7, 6, 2, NULL), (8, 7, 2, NULL), (9, 6, 2, 2), (10, 7, 2, 2), (11, 5, 2, 2), (12, 4, 2, 2); CREATE TABLE IF NOT EXISTS `tags` ( `id_tag` int(10) unsigned NOT NULL AUTO_INCREMENT, `tag` varchar(255) DEFAULT NULL, PRIMARY KEY (`id_tag`), UNIQUE KEY `tag` (`tag`), KEY `id_tag` (`id_tag`), KEY `tag_2` (`tag`), KEY `tag_3` (`tag`), KEY `tag_4` (`tag`), FULLTEXT KEY `tag_5` (`tag`) ) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=8 ; INSERT INTO `tags` (`id_tag`, `tag`) VALUES (1, 'Sandeepan'), (2, 'Nath'), (3, 'first'), (4, 'class'), (5, 'new'), (6, 'Bob'), (7, 'Cratchit'); Please note that for every class, the tag rels of its tutor have to be duplicated. Example, for class with id_wc=1, the tag rel records with id_tag_rel = 3 and 4 are actually extras if you compare with the tag rel records with id_tag_rel = 1 and 2. System 2 (present system - profile edition easy, search difficult) Two separate tables Tutors_Tag_Relations and Webclasses_Tag_Relations have the corresponding tag relations data (Please dump into a separate database)- CREATE TABLE IF NOT EXISTS `tutors_tag_relations` ( `id_tag_rel` int(10) NOT NULL AUTO_INCREMENT, `id_tag` int(10) unsigned NOT NULL DEFAULT '0', `id_tutor` int(10) DEFAULT NULL, PRIMARY KEY (`id_tag_rel`), KEY `All_Tag_Relations_FKIndex1` (`id_tag`), KEY `id_tag` (`id_tag`) ) ENGINE=InnoDB DEFAULT CHARSET=latin1; INSERT INTO `tutors_tag_relations` (`id_tag_rel`, `id_tag`, `id_tutor`) VALUES (1, 1, 1), (2, 2, 1), (3, 6, 2), (4, 7, 2); CREATE TABLE IF NOT EXISTS `webclasses_tag_relations` ( `id_tag_rel` int(10) NOT NULL AUTO_INCREMENT, `id_tag` int(10) unsigned NOT NULL DEFAULT '0', `id_tutor` int(10) DEFAULT NULL, `id_wc` int(10) DEFAULT NULL, PRIMARY KEY (`id_tag_rel`), KEY `webclasses_Tag_Relations_FKIndex1` (`id_tag`), KEY `id_wc` (`id_wc`), KEY `id_tag` (`id_tag`) ) ENGINE=InnoDB DEFAULT CHARSET=latin1; INSERT INTO `webclasses_tag_relations` (`id_tag_rel`, `id_tag`, `id_tutor`, `id_wc`) VALUES (1, 3, 1, 1), (2, 4, 1, 1), (3, 5, 2, 2), (4, 4, 2, 2); CREATE TABLE IF NOT EXISTS `tags` ( `id_tag` int(10) unsigned NOT NULL AUTO_INCREMENT, `tag` varchar(255) DEFAULT NULL, PRIMARY KEY (`id_tag`), UNIQUE KEY `tag` (`tag`), KEY `id_tag` (`id_tag`), KEY `tag_2` (`tag`), KEY `tag_3` (`tag`), KEY `tag_4` (`tag`), FULLTEXT KEY `tag_5` (`tag`) ) ENGINE=MyISAM DEFAULT CHARSET=latin1 AUTO_INCREMENT=8 ; INSERT INTO `tags` (`id_tag`, `tag`) VALUES (1, 'Sandeepan'), (2, 'Nath'), (3, 'first'), (4, 'class'), (5, 'new'), (6, 'Bob'), (7, 'Cratchit'); CREATE TABLE IF NOT EXISTS `all_tag_relations` ( `id_tag_rel` int(10) NOT NULL AUTO_INCREMENT, `id_tag` int(10) unsigned NOT NULL DEFAULT '0', `id_tutor` int(10) DEFAULT NULL, `id_wc` int(10) unsigned DEFAULT NULL, PRIMARY KEY (`id_tag_rel`), KEY `All_Tag_Relations_FKIndex1` (`id_tag`), KEY `id_wc` (`id_wc`) ) ENGINE=InnoDB DEFAULT CHARSET=latin1; insert into All_Tag_Relations select NULL,id_tag,id_tutor,NULL from Tutors_Tag_Relations; insert into All_Tag_Relations select NULL,id_tag,id_tutor,id_wc from Webclasses_Tag_Relations; Here you can see how easily tutor first name can be edited only in one place. But search has become really difficult, so on being advised to use a Temporary table, I am creating one at every search request, then dumping all the necessary data and then searching from it, I am creating this All_Tag_Relations table at search run time. Here I am just dumping all the data from the two tables Tutors_Tag_Relations and Webclasses_Tag_Relations. But, I am still not able to get classes if I search with tutor name This is the query which searches "first class". Running them on both the systems shows correct results (returns the class with id_wc = 1). SELECT wtagrels.id_wc,SUM(DISTINCT( wtagrels.id_tag =3)) AS key_1_total_matches, SUM(DISTINCT( wtagrels.id_tag =4)) AS key_2_total_matches FROM all_tag_relations AS wtagrels WHERE ( wtagrels.id_tag =3 OR wtagrels.id_tag =4 ) GROUP BY wtagrels.id_wc HAVING key_1_total_matches = 1 AND key_2_total_matches = 1 LIMIT 0, 20 But, searching for "Sandeepan class" works only with the 1st system Here is the query which searches "Sandeepan class" SELECT wtagrels.id_wc,SUM(DISTINCT( wtagrels.id_tag =1)) AS key_1_total_matches, SUM(DISTINCT( wtagrels.id_tag =4)) AS key_2_total_matches FROM all_tag_relations AS wtagrels WHERE ( wtagrels.id_tag =1 OR wtagrels.id_tag =4 ) GROUP BY wtagrels.id_wc HAVING key_1_total_matches = 1 AND key_2_total_matches = 1 LIMIT 0, 20 Can anybody alter this query and somehow do a proper join or something to get correct results. That solves my problem in a nice way. As you can figure out, the reason why it does not work in system 2 is that in system 1, for every class, one additional tag relation linking class and tutor name is present. e.g. for class first class, (records with id_tag_rel 3 and 4) which returns the class on searching with tutor name. So, you see the trade-off between the search and profile edition difficulty with the two systems. How do I overcome both. I have to reach a conclusion soon. So far my reasoning is it is definitely not good from a code maintainability point of view to follow the single tag rel table structure of system one, because in a real system while editing a field like "tutor qualifications", there can be as many records in tag rels table as there are words in qualification of a tutor (one word in a field = one tag relation). Now suppose a tutor has 100 classes. When he edits his qualification, all the tag rel rows corresponding to him are deleted and then as many copies are to be created (as per the new qualification data) as there are classes. This becomes particularly difficult if later more searcheable fields are added. The code cannot be robust. Is the best solution to follow system 2 (edition has to be in one table - no extra work for each and every class) and somehow re-create the all_tag_relations table like system 1 (from the tables tutor_tag_relations and webclasses_tag_relations), creating the extra tutor tag rels for each and every class by a tutor (which is currently missing in system 2's temporary all_tag_relations table). That would be a time consuming logic script. I doubt that table can be recreated without resorting to PHP sript (mysql alone cannot do that). But the problem is that running all this at search time will make search definitely slow. So, how do such systems work? How are such situations handled? I thought about we can run a cron which initiates that PHP script, say every 1 minute and replaces the existing all_tag_relations table as per new tag rels from tutor_tag_relations and webclasses_tag_relations (replaces means creates a new table, deletes the original and renames the new one as all_tag_relations, otherwise search won't work during that period- or is there any better way to that?). Anyway, the result would be that any changes by tutors will reflect in search in the next 1 minute and not immediately. An alternateve would be to initate that PHP script every time a tutor edits his profile. But here again, since many users may edit their profiles concurrently, will the creation of so many tables be a burden and can mysql make the server slow? Any help would be appreciated and working solution will be accepted as answer. Thanks, Sandeepan

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  • Learn ASP.NET or Python for web development?

    - by user300371
    I am new to programming and only know html,css,PHP and would like to start learning another new language. I am focused on web development and would just like to get your opinion on ASP.net and python. Which language would serve me best in making sites as to general programming? ASP.NET or django python? I know Python is "easy to learn" and similar to PHP, but ASP.net is also a good language.

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  • CVS tools for repo monitoring on windows?

    - by Bjorn J
    I sometime use the very simple but effective svncommitmonitor, http://tools.tortoisesvn.net/CommitMonitor to monitor activity. It's easy to see in the sys tray on a windows box and I've become used to it by now. So, is there a similar/identical tool for CVS. Some googling and to my surprise I couldn't find one. Any tips?

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  • cmake source and out-of-source navigation

    - by idimba
    Hi, cmake advises to use out-of-source builds. While in general I like the idea I find it not comfortable to navigate from out-of-source sub directory to the corresponding source directory. I frequently need the code to perform some actions with code (e.g. grep, svn command etc.). Is there an easy way in shell to navigate from out-of-source sub directory to the corresponding source directory? Thanks Dima

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  • Codeigniter: Checklist for new users & logistics of app

    - by Kevin Brown
    I'm developing my first web-app, and I'm working through logistics. New users (At first login) need to complete a few things before they can use the app fully. For example, they need to complete their profile before they can move on to step 2, which is taking a test. What's the best way to go about creating a "new-user" checklist? I want it to be as simple as possible, coding wise, and as easy as possible for the user.

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  • Sort file as Month name in ColdFusion

    - by Simon Guo
    I have a directory, it contains files like: january2009.xml, february2009.xml, march2009.xml,april2009.xml,january2010.xml, february2010.xml, march2010.xml,april2010.xml ... I use the cfdirectory to get the file by year. Right now, I want to display it as sorted order in month. Say If I only want year 2009 data. I want it sorted as january2009.xml, february2009.xml, march2009.xml,april2009.xml but not april2009.xml, february2009.xml, january2009.xml, march2009.xml Anyone has easy way to do it in ColdFusion?

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  • DCVS + hosting for a startup commercial multiplatform phone app

    - by AG
    I'm in lean startup mode, working on a simple phone app that will be published initially as a iThingy app and an Android app with, possibly, Blackberry and Symbian versions to follow. I'm about to go from no repository to needing a central repository that up to 4 very part-time resources will be sharing. Two of us have no version control background, one has used Subversion, and I've used most of the major centralized VCS systems. I'm not going to be pushing the technical limitations of any VCS for a long time; I'm sure that any of the major systems would work fine. And the hosting accounts I've looked at seem reasonable. So I'm really focussed on minimizing the downside risks. That is, I'd like to find a stable setup that is easy to learn in general, easy to use from Windows/Eclipse, and won't paint me into any obvious corners for the next 12 months or so. A quick search of the web had led me to consider the following pairs of DVCS and hosting service, with what I think I'm hearing as their strengths and weaknesses (for my purposes): Bazaar/Launchpad -- My initial choice since I need to get more familiar with this pair for the Google Summer of Code mentoring I'm doing. But, whatever the technical merits, a non-starter for me because they are purely open source, no private repositories plans to purchase that I can see. Git/GitHub -- Git: Fast, light, ultimately flexible, but relatively less Windows friendly, Eclipse plugin (eGit) available but relatively young, GitHub: widely used, pricing is fine Mercurial/BitBucket -- Mercurial: a little less flexible, a little more Windows friendly, Eclipse plugin seems a bit more mature, BitBucket: widely used, pricing is fine, includes a wiki and an issue tracker that we might be able to use instead of something like BaseCamp, at least for a while. Mercurial/BitBucket seem like the winning pair so far for my particular situation; at least two of us are definitely going to be working mostly from Eclipse on Windows and reducing my own learning curve is a priority. ;-) But I have two specific questions: 1) Am I wrong about Bazaar/Launchpad and is there a viable, secure way to use them for proprietary code? 2) Any reason to think that the Mecurial/Bitbucket pair will end up being a headache for my Mac developer, soon, or for Blackberry or Symbian developers a little later? ag

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  • Inheriting list item permissions via permissions on lookup field item

    - by Dan Sydner
    Say you have two lists in Sharepoint, let's call them "house" and "region". Each house is assigned to a region via a lookup field. List item permissions are set on regions. Now I want the users only to only see the houses which belong to the regions they have read access to. I reckon it should be relatively simple I see no easy way of doing this. Am I over looking something.

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  • programmatically unset a default application

    - by dystroy
    I made a Home application and I'd like to offer the ability to exit it and unset it as the default application. Exit is easy (just starting an intent) but the problem is I don't want my program to be launched again the next time the user click the Home button. I know that this can be done by going in the parameters / Applications / my app / erase default actions but I would like to do it from my program so that the user doesn't have to search this function. How can it be done ?

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  • Encrypt column data with LINQ

    - by kape123
    I was wondering if there is easy solution to this or I'm stuck with following: When updating DB: dti.Pass = Crypter.Encrypt(dti.Pass); _db.SubmitChanges(); When selecting from DB: Data.DbTableItem dti = _db.Single(a=a.Id == id); dti.Pass = Crypter.Decrypt(dti.Pass); Meaning - I am not really into writing repetitive code and this seems like logical thing to be supported by LINQ; so I'm wondering if it is.

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